RNA–Protein interactions for RNA: ENST00000503627.2

GYPA-203, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 318 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-203ENST00000503627 NEBP20929 6669 aa-0.38□□□□□ -2.47
GYPA-203ENST00000503627 CEP250Q9BV73 2442 aa-0.38□□□□□ -2.47
GYPA-203ENST00000503627 DEFB133Q30KQ1 61 aa-0.39□□□□□ -2.47
GYPA-203ENST00000503627 NIPBLQ6KC79 2804 aaeCLIP-0.39□□□□□ -2.47
GYPA-203ENST00000503627 EYSQ5T1H1 3165 aa-0.39□□□□□ -2.47
GYPA-203ENST00000503627 DNAH5Q8TE73 4624 aa-0.4□□□□□ -2.47
GYPA-203ENST00000503627 VPS13CQ709C8 3753 aa-0.41□□□□□ -2.47
GYPA-203ENST00000503627 TLN1Q9Y490 2541 aaKnown RBP-0.41□□□□□ -2.47
GYPA-203ENST00000503627 ATMQ13315 3056 aa-0.41□□□□□ -2.48
GYPA-203ENST00000503627 H3BUX3 64 aa-0.43□□□□□ -2.48
GYPA-203ENST00000503627 MT1GP13640 62 aa-0.43□□□□□ -2.48
GYPA-203ENST00000503627 DEFB124Q8NES8 71 aa-0.43□□□□□ -2.48
GYPA-203ENST00000503627 CSMD2Q7Z408 3487 aa-0.44□□□□□ -2.48
GYPA-203ENST00000503627 TMEM167AQ8TBQ9 72 aa-0.46□□□□□ -2.48
GYPA-203ENST00000503627 DMDP11532 3685 aa-0.46□□□□□ -2.48
GYPA-203ENST00000503627 PRUNE2Q8WUY3 3088 aa-0.46□□□□□ -2.48
GYPA-203ENST00000503627 HERC2O95714 4834 aa-0.47□□□□□ -2.48
GYPA-203ENST00000503627 FRYLO94915 3013 aa-0.48□□□□□ -2.49
GYPA-203ENST00000503627 EPPK1P58107 5090 aaKnown RBP-0.48□□□□□ -2.49
GYPA-203ENST00000503627 RYR3Q15413 4870 aa-0.49□□□□□ -2.49
GYPA-203ENST00000503627 MYO15AQ9UKN7 3530 aa-0.5□□□□□ -2.49
GYPA-203ENST00000503627 ITPR2Q14571 2701 aa-0.51□□□□□ -2.49
GYPA-203ENST00000503627 MT1HL1P0DM35 61 aa-0.52□□□□□ -2.49
GYPA-203ENST00000503627 DNAH12Q6ZR08 3092 aa-0.54□□□□□ -2.5
GYPA-203ENST00000503627 CEP295Q9C0D2 2601 aa-0.55□□□□□ -2.5
GYPA-203ENST00000503627 MT2AP02795 61 aa-0.55□□□□□ -2.5
GYPA-203ENST00000503627 RPL39P5Q59GN2 51 aa-0.55□□□□□ -2.5
GYPA-203ENST00000503627 MT1MQ8N339 61 aa-0.55□□□□□ -2.5
GYPA-203ENST00000503627 RPS29P62273 56 aaKnown RBP-0.56□□□□□ -2.5
GYPA-203ENST00000503627 CD52P31358 61 aa-0.57□□□□□ -2.5
GYPA-203ENST00000503627 BIRC6Q9NR09 4857 aa-0.57□□□□□ -2.5
GYPA-203ENST00000503627 RNF213Q63HN8 5207 aa-0.57□□□□□ -2.5
GYPA-203ENST00000503627 WDFY4Q6ZS81 3184 aa-0.59□□□□□ -2.5
GYPA-203ENST00000503627 MUC3AQ02505 3323 aa-0.6□□□□□ -2.51
GYPA-203ENST00000503627 HYDINQ4G0P3 5121 aa-0.61□□□□□ -2.51
GYPA-203ENST00000503627 XIRP2A4UGR9 3374 aa-0.62□□□□□ -2.51
GYPA-203ENST00000503627 DEFB108AA8MXU0 73 aa-0.62□□□□□ -2.51
GYPA-203ENST00000503627 KIAA1109Q2LD37 5005 aa-0.62□□□□□ -2.51
GYPA-203ENST00000503627 CEP350Q5VT06 3117 aa-0.64□□□□□ -2.51
GYPA-203ENST00000503627 SZT2Q5T011 3432 aa-0.65□□□□□ -2.51
GYPA-203ENST00000503627 PCNTO95613 3336 aa-0.65□□□□□ -2.51
GYPA-203ENST00000503627 FREM2Q5SZK8 3169 aa-0.68□□□□□ -2.52
GYPA-203ENST00000503627 APELAP0DMC3 54 aa-0.69□□□□□ -2.52
GYPA-203ENST00000503627 DCHS1Q96JQ0 3298 aa-0.69□□□□□ -2.52
GYPA-203ENST00000503627 MKI67P46013 3256 aaKnown RBP-0.7□□□□□ -2.52
GYPA-203ENST00000503627 LINC01556Q5JQF7 62 aa-0.73□□□□□ -2.53
GYPA-203ENST00000503627 RYR2Q92736 4967 aa-0.75□□□□□ -2.53
GYPA-203ENST00000503627 BOD1L1Q8NFC6 3051 aa-0.77□□□□□ -2.53
GYPA-203ENST00000503627 A0A096LPF7 62 aa-0.77□□□□□ -2.53
GYPA-203ENST00000503627 WDFY3Q8IZQ1 3526 aa-0.77□□□□□ -2.53
GYPA-203ENST00000503627 MT1BP07438 61 aa-0.78□□□□□ -2.53
GYPA-203ENST00000503627 CENPEQ02224 2701 aa-0.8□□□□□ -2.54
GYPA-203ENST00000503627 LOC400499M0QZD8 3231 aa-0.84□□□□□ -2.54
GYPA-203ENST00000503627 ABCA13Q86UQ4 5058 aa-0.84□□□□□ -2.54
GYPA-203ENST00000503627 ASPMQ8IZT6 3477 aa-0.87□□□□□ -2.55
GYPA-203ENST00000503627 EP400Q96L91 3159 aa-0.91□□□□□ -2.55
GYPA-203ENST00000503627 MT1FP04733 61 aa-0.91□□□□□ -2.56
GYPA-203ENST00000503627 SPEGQ15772 3267 aa-0.93□□□□□ -2.56
GYPA-203ENST00000503627 USP34Q70CQ2 3546 aa-0.94□□□□□ -2.56
GYPA-203ENST00000503627 UNC80Q8N2C7 3258 aa-0.96□□□□□ -2.56
GYPA-203ENST00000503627 CFAP47Q6ZTR5 3102 aa-1□□□□□ -2.57
GYPA-203ENST00000503627 HTN3P15516 51 aa-1.02□□□□□ -2.57
GYPA-203ENST00000503627 Q9Y3F1 56 aa-1.02□□□□□ -2.57
GYPA-203ENST00000503627 BRCA2P51587 3418 aa-1.04□□□□□ -2.58
GYPA-203ENST00000503627 DEFB108BQ8NET1 73 aa-1.1□□□□□ -2.59
GYPA-203ENST00000503627 CENPFP49454 3210 aa-1.15□□□□□ -2.59
GYPA-203ENST00000503627 KRTAP19-2Q3LHN2 52 aa-1.16□□□□□ -2.6
GYPA-203ENST00000503627 VCANP13611 3396 aa-1.16□□□□□ -2.6
GYPA-203ENST00000503627 DNAH14Q0VDD8 3507 aa-1.18□□□□□ -2.6
GYPA-203ENST00000503627 KRTAP20-1Q3LI63 56 aa-1.21□□□□□ -2.6
GYPA-203ENST00000503627 UTRNP46939 3433 aa-1.23□□□□□ -2.61
GYPA-203ENST00000503627 STATHP02808 62 aa-1.24□□□□□ -2.61
GYPA-203ENST00000503627 COX14Q96I36 57 aa-1.27□□□□□ -2.61
GYPA-203ENST00000503627 VPS13AQ96RL7 3174 aa-1.32□□□□□ -2.62
GYPA-203ENST00000503627 GOLGB1Q14789 3259 aaKnown RBP-1.36□□□□□ -2.63
GYPA-203ENST00000503627 CDH23Q9H251 3354 aa-1.36□□□□□ -2.63
GYPA-203ENST00000503627 KRTAP19-6Q3LI70 58 aa-1.42□□□□□ -2.64
Retrieved 77 of 20,778 RNA–protein pairs in 13.6 ms