RNA–Protein interactions for RNA: ENST00000477039.5

PPARG-213, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

TSL 1 (best)

Gene PPARG, Length 1,705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-213ENST00000477039 WRNQ14191 1432 aaPredicted RBP eCLIP13.57□□□□□ -0.24
PPARG-213ENST00000477039 EEA1Q15075 1411 aa13.56□□□□□ -0.24
PPARG-213ENST00000477039 FAM9AQ8IZU1 332 aaPredicted RBP13.56□□□□□ -0.24
PPARG-213ENST00000477039 SPRYD3Q8NCJ5 442 aa13.53□□□□□ -0.24
PPARG-213ENST00000477039 PROM2Q8N271 834 aa13.52□□□□□ -0.25
PPARG-213ENST00000477039 SYNJ1O43426 1573 aa13.48□□□□□ -0.25
PPARG-213ENST00000477039 CFTRP13569 1480 aa13.47□□□□□ -0.25
PPARG-213ENST00000477039 TMEM132AQ24JP5 1023 aa13.46□□□□□ -0.25
PPARG-213ENST00000477039 PRDM2Q13029 1718 aa13.46□□□□□ -0.26
PPARG-213ENST00000477039 TOP2BQ02880 1626 aa13.45□□□□□ -0.26
PPARG-213ENST00000477039 BIVM-ERCC5R4GMW8 1640 aa13.44□□□□□ -0.26
PPARG-213ENST00000477039 SOGA1O94964 1423 aa13.43□□□□□ -0.26
PPARG-213ENST00000477039 TSHZ2Q9NRE2 1034 aa13.43□□□□□ -0.26
PPARG-213ENST00000477039 ECM2O94769 699 aaPredicted RBP13.42□□□□□ -0.26
PPARG-213ENST00000477039 NPM1P06748 294 aaKnown RBP eCLIP13.42□□□□□ -0.26
PPARG-213ENST00000477039 C14orf37Q86TY3 774 aa13.4□□□□□ -0.26
PPARG-213ENST00000477039 CADPSQ9ULU8 1353 aa13.36□□□□□ -0.27
PPARG-213ENST00000477039 GOLGA3Q08378 1498 aa13.35□□□□□ -0.27
PPARG-213ENST00000477039 ZNF219Q9P2Y4 722 aaPredicted RBP13.35□□□□□ -0.27
PPARG-213ENST00000477039 RUSC2Q8N2Y8 1516 aa13.34□□□□□ -0.27
PPARG-213ENST00000477039 KIF21BO75037 1637 aa13.34□□□□□ -0.27
PPARG-213ENST00000477039 TNIKQ9UKE5 1360 aa13.34□□□□□ -0.27
PPARG-213ENST00000477039 CEP164Q9UPV0 1460 aa13.33□□□□□ -0.27
PPARG-213ENST00000477039 SPOCK2Q92563 424 aa13.32□□□□□ -0.28
PPARG-213ENST00000477039 CUX1P39880 1505 aa13.32□□□□□ -0.28
PPARG-213ENST00000477039 RANGAP1P46060 587 aaPredicted RBP13.31□□□□□ -0.28
PPARG-213ENST00000477039 NESP48681 1621 aa13.3□□□□□ -0.28
PPARG-213ENST00000477039 PCGF6Q9BYE7 350 aa13.3□□□□□ -0.28
PPARG-213ENST00000477039 TRIM26Q12899 539 aaPredicted RBP13.29□□□□□ -0.28
PPARG-213ENST00000477039 THOC2Q8NI27 1593 aaKnown RBP13.27□□□□□ -0.28
PPARG-213ENST00000477039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.27□□□□□ -0.292e-7■□□□□ 10.1
PPARG-213ENST00000477039 CEP162Q5TB80 1403 aa13.27□□□□□ -0.29
PPARG-213ENST00000477039 KLHL34Q8N239 644 aa13.25□□□□□ -0.29
PPARG-213ENST00000477039 UBTFP17480 764 aaKnown RBP13.23□□□□□ -0.29
PPARG-213ENST00000477039 LAMC3Q9Y6N6 1575 aa13.23□□□□□ -0.29
PPARG-213ENST00000477039 KIF27Q86VH2 1401 aa13.22□□□□□ -0.29
PPARG-213ENST00000477039 FANCD2Q9BXW9 1451 aa13.22□□□□□ -0.29
PPARG-213ENST00000477039 ERICH3Q5RHP9 1530 aa13.22□□□□□ -0.29
PPARG-213ENST00000477039 APLP2Q06481 763 aa13.2□□□□□ -0.3
PPARG-213ENST00000477039 PRXQ9BXM0 1461 aa13.17□□□□□ -0.3
PPARG-213ENST00000477039 RGL2O15211 777 aa13.17□□□□□ -0.3
PPARG-213ENST00000477039 DNMBPQ6XZF7 1577 aa13.17□□□□□ -0.3
PPARG-213ENST00000477039 PDS5BQ9NTI5 1447 aa13.17□□□□□ -0.3
PPARG-213ENST00000477039 RAPGEF2Q9Y4G8 1499 aa13.16□□□□□ -0.3
PPARG-213ENST00000477039 FGD5Q6ZNL6 1462 aa13.15□□□□□ -0.3
PPARG-213ENST00000477039 HRCP23327 699 aa13.14□□□□□ -0.31
PPARG-213ENST00000477039 CHGAP10645 457 aaKnown RBP13.13□□□□□ -0.31
PPARG-213ENST00000477039 U3KPZ7 1027 aaPredicted RBP13.13□□□□□ -0.31
PPARG-213ENST00000477039 CLIP1P30622 1438 aa13.12□□□□□ -0.31
PPARG-213ENST00000477039 KIF21AQ7Z4S6 1674 aa13.12□□□□□ -0.31
PPARG-213ENST00000477039 MKRN4PQ13434 485 aaPredicted RBP13.11□□□□□ -0.31
PPARG-213ENST00000477039 TOPBP1Q92547 1522 aa13.1□□□□□ -0.31
PPARG-213ENST00000477039 PODXL2Q9NZ53 605 aa13.07□□□□□ -0.32
PPARG-213ENST00000477039 ABCA10Q8WWZ4 1543 aa13.06□□□□□ -0.32
PPARG-213ENST00000477039 VPS8Q8N3P4 1428 aa13.05□□□□□ -0.32
PPARG-213ENST00000477039 POLA1P09884 1462 aaPredicted RBP13.05□□□□□ -0.32
PPARG-213ENST00000477039 MRC2Q9UBG0 1479 aa13.05□□□□□ -0.32
PPARG-213ENST00000477039 IGF1RP08069 1367 aa13.04□□□□□ -0.32
PPARG-213ENST00000477039 WDR62O43379 1518 aa13.03□□□□□ -0.32
PPARG-213ENST00000477039 URB2Q14146 1524 aaKnown RBP13.02□□□□□ -0.33
PPARG-213ENST00000477039 OSCARQ8IYS5 282 aa13.01□□□□□ -0.33
PPARG-213ENST00000477039 WDR97A6NE52 1622 aa13□□□□□ -0.33
PPARG-213ENST00000477039 CARMIL1Q5VZK9 1371 aa12.99□□□□□ -0.33
PPARG-213ENST00000477039 CUL7Q14999 1698 aa12.99□□□□□ -0.33
PPARG-213ENST00000477039 DCAF8L1A6NGE4 600 aa12.98□□□□□ -0.33
PPARG-213ENST00000477039 RAD54L2Q9Y4B4 1467 aa12.98□□□□□ -0.33
PPARG-213ENST00000477039 HS6ST3Q8IZP7 471 aa12.96□□□□□ -0.33
PPARG-213ENST00000477039 PPARGC1BQ86YN6 1023 aaKnown RBP12.96□□□□□ -0.34
PPARG-213ENST00000477039 STAG3Q9UJ98 1225 aa12.96□□□□□ -0.34
PPARG-213ENST00000477039 ARAP1Q96P48 1450 aa12.94□□□□□ -0.34
PPARG-213ENST00000477039 ZEB1P37275 1124 aaPredicted RBP12.94□□□□□ -0.34
PPARG-213ENST00000477039 ABCA5Q8WWZ7 1642 aa12.93□□□□□ -0.34
PPARG-213ENST00000477039 PLCD3Q8N3E9 789 aa12.91□□□□□ -0.34
PPARG-213ENST00000477039 ARHGAP35Q9NRY4 1499 aa12.9□□□□□ -0.34
PPARG-213ENST00000477039 TARBP1Q13395 1621 aaKnown RBP12.89□□□□□ -0.35
PPARG-213ENST00000477039 GAPVD1Q14C86 1478 aa12.88□□□□□ -0.35
PPARG-213ENST00000477039 CTTNBP2Q8WZ74 1663 aa12.86□□□□□ -0.35
PPARG-213ENST00000477039 CIZ1Q9ULV3 898 aaPredicted RBP12.86□□□□□ -0.35
PPARG-213ENST00000477039 EFCAB5A4FU69 1503 aa12.85□□□□□ -0.35
PPARG-213ENST00000477039 P3H3Q8IVL6 736 aa12.84□□□□□ -0.35
PPARG-213ENST00000477039 RIMBP3CA6NJZ7 1639 aa12.83□□□□□ -0.35
PPARG-213ENST00000477039 RIMBP3BA6NNM3 1639 aa12.83□□□□□ -0.35
PPARG-213ENST00000477039 RIMBP3Q9UFD9 1639 aa12.83□□□□□ -0.35
PPARG-213ENST00000477039 TDRD9Q8NDG6 1382 aaKnown RBP12.83□□□□□ -0.36
PPARG-213ENST00000477039 TTBK1Q5TCY1 1321 aaPredicted RBP12.82□□□□□ -0.36
PPARG-213ENST00000477039 FHAD1B1AJZ9 1412 aa12.82□□□□□ -0.36
PPARG-213ENST00000477039 MAP3K1Q13233 1512 aa12.81□□□□□ -0.36
PPARG-213ENST00000477039 IFT140Q96RY7 1462 aa12.81□□□□□ -0.36
PPARG-213ENST00000477039 PBRM1Q86U86 1689 aa12.81□□□□□ -0.36
PPARG-213ENST00000477039 ZBTB47Q9UFB7 747 aaPredicted RBP12.79□□□□□ -0.36
PPARG-213ENST00000477039 ARHGEF11O15085 1522 aa12.77□□□□□ -0.37
PPARG-213ENST00000477039 GRIN2BQ13224 1484 aa12.76□□□□□ -0.37
PPARG-213ENST00000477039 BRPF1P55201 1214 aaPredicted RBP12.76□□□□□ -0.37
PPARG-213ENST00000477039 ADAMTS12P58397 1594 aa12.75□□□□□ -0.37
PPARG-213ENST00000477039 TIAM1Q13009 1591 aa12.75□□□□□ -0.37
PPARG-213ENST00000477039 MIER1Q8N108 512 aa12.75□□□□□ -0.37
PPARG-213ENST00000477039 AQRO60306 1485 aaKnown RBP eCLIP12.75□□□□□ -0.37
PPARG-213ENST00000477039 PLEKHG5O94827 1062 aa12.74□□□□□ -0.37
PPARG-213ENST00000477039 NPM2Q86SE8 214 aaKnown RBP12.73□□□□□ -0.37
PPARG-213ENST00000477039 FYCO1Q9BQS8 1478 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms