RNA–Protein interactions for RNA: ENST00000477039.5

PPARG-213, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

TSL 1 (best)

Gene PPARG, Length 1,705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-213ENST00000477039 CSTF2P33240 577 aaKnown RBP eCLIP7.81□□□□□ -1.162e-17■■■■■ 47
PPARG-213ENST00000477039 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.94□□□□□ -0.668e-10■□□□□ 8.2
PPARG-213ENST00000477039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.27□□□□□ -0.292e-7■□□□□ 10.1
PPARG-213ENST00000477039 PTBP1P26599 531 aaKnown RBP eCLIP7.63□□□□□ -1.196e-7■■■■□ 23.6
PPARG-213ENST00000477039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.97□□□□□ -0.659e-7■□□□□ 11.3
PPARG-213ENST00000477039 MATR3P43243 847 aaKnown RBP eCLIP9.06□□□□□ -0.961e-6■■■■■ 29.6
PPARG-213ENST00000477039 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.53□□□□□ -1.043e-6■■□□□ 13.6
PPARG-213ENST00000477039 HNRNPLP14866 589 aaKnown RBP eCLIP8.36□□□□□ -1.076e-6■■□□□ 12.3
PPARG-213ENST00000477039 ILF3Q12906 894 aaKnown RBP eCLIP8□□□□□ -1.137e-6■■■■□ 19.9
PPARG-213ENST00000477039 U2AF2P26368 475 aaKnown RBP eCLIP9.74□□□□□ -0.858e-6■■■■□ 25
Retrieved 10 of 10 RNA–protein pairs in 4.2 ms