RNA–Protein interactions for RNA: ENST00000477039.5

PPARG-213, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

TSL 1 (best)

Gene PPARG, Length 1,705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-213ENST00000477039 CHIC1Q5VXU3 224 aa20.88■□□□□ 0.93
PPARG-213ENST00000477039 AEBP2Q6ZN18 517 aaPredicted RBP19.9■□□□□ 0.78
PPARG-213ENST00000477039 NISCHQ9Y2I1 1504 aa18.47■□□□□ 0.55
PPARG-213ENST00000477039 PHF23Q9BUL5 403 aaPredicted RBP18.4■□□□□ 0.54
PPARG-213ENST00000477039 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
PPARG-213ENST00000477039 EHMT2Q96KQ7 1210 aa17.32■□□□□ 0.36
PPARG-213ENST00000477039 SENP3Q9H4L4 574 aaPredicted RBP16.86■□□□□ 0.29
PPARG-213ENST00000477039 KCNA4P22459 653 aa16.76■□□□□ 0.27
PPARG-213ENST00000477039 SLC24A1O60721 1099 aa16.65■□□□□ 0.26
PPARG-213ENST00000477039 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
PPARG-213ENST00000477039 SLC4A1APQ9BWU0 796 aaKnown RBP16.29■□□□□ 0.2
PPARG-213ENST00000477039 ADRA2BP18089 450 aa16.26■□□□□ 0.19
PPARG-213ENST00000477039 CCDC180Q9P1Z9 1646 aa16.05■□□□□ 0.16
PPARG-213ENST00000477039 AMER1Q5JTC6 1135 aaPredicted RBP16.02■□□□□ 0.16
PPARG-213ENST00000477039 RTN4Q9NQC3 1192 aaKnown RBP15.88■□□□□ 0.13
PPARG-213ENST00000477039 PPP6R1Q9UPN7 881 aa15.77■□□□□ 0.12
PPARG-213ENST00000477039 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
PPARG-213ENST00000477039 PPP4R3CPQ6ZMV5 832 aa15.65■□□□□ 0.1
PPARG-213ENST00000477039 ABCC9O60706 1549 aa15.64■□□□□ 0.09
PPARG-213ENST00000477039 ZCCHC6Q5VYS8 1495 aaKnown RBP15.58■□□□□ 0.08
PPARG-213ENST00000477039 ZBTB22O15209 634 aa15.38■□□□□ 0.05
PPARG-213ENST00000477039 NPM3O75607 178 aaKnown RBP15.37■□□□□ 0.05
PPARG-213ENST00000477039 FOXD1Q16676 465 aa15.36■□□□□ 0.05
PPARG-213ENST00000477039 DCAF1Q9Y4B6 1507 aa15.32■□□□□ 0.04
PPARG-213ENST00000477039 SHROOM4Q9ULL8 1493 aa15.15■□□□□ 0.02
PPARG-213ENST00000477039 FOXD4L1Q9NU39 408 aa15.13■□□□□ 0.01
PPARG-213ENST00000477039 DCAF8L2P0C7V8 631 aa15.12■□□□□ 0.01
PPARG-213ENST00000477039 MYO15BQ96JP2 1530 aa15.06■□□□□ 0
PPARG-213ENST00000477039 DNAJC5BQ9UF47 199 aa14.97□□□□□ -0.01
PPARG-213ENST00000477039 CNKSR2Q8WXI2 1034 aa14.97□□□□□ -0.01
PPARG-213ENST00000477039 PIAS4Q8N2W9 510 aaPredicted RBP14.89□□□□□ -0.03
PPARG-213ENST00000477039 NACADO15069 1562 aa14.88□□□□□ -0.03
PPARG-213ENST00000477039 FKBP8Q14318 412 aa14.86□□□□□ -0.03
PPARG-213ENST00000477039 RB1CC1Q8TDY2 1594 aa14.76□□□□□ -0.05
PPARG-213ENST00000477039 SCAF1Q9H7N4 1312 aaKnown RBP14.74□□□□□ -0.05
PPARG-213ENST00000477039 SCRIBQ14160 1630 aa14.72□□□□□ -0.05
PPARG-213ENST00000477039 SUPT5HO00267 1087 aaKnown RBP14.72□□□□□ -0.05
PPARG-213ENST00000477039 BCANQ96GW7 911 aa14.65□□□□□ -0.06
PPARG-213ENST00000477039 PLCB2Q00722 1185 aa14.63□□□□□ -0.07
PPARG-213ENST00000477039 ATXN8OSP0DMR3 200 aa14.55□□□□□ -0.08
PPARG-213ENST00000477039 PABPN1Q86U42 306 aaKnown RBP eCLIP14.49□□□□□ -0.09
PPARG-213ENST00000477039 TAOK2Q9UL54 1235 aa14.46□□□□□ -0.1
PPARG-213ENST00000477039 PRKCSHP14314 528 aaPredicted RBP14.44□□□□□ -0.1
PPARG-213ENST00000477039 HAP1P54257 671 aaPredicted RBP14.44□□□□□ -0.1
PPARG-213ENST00000477039 RSF1Q96T23 1441 aaPredicted RBP14.4□□□□□ -0.1
PPARG-213ENST00000477039 UNC13AQ9UPW8 1703 aa14.36□□□□□ -0.11
PPARG-213ENST00000477039 RNF216Q9NWF9 866 aaPredicted RBP14.33□□□□□ -0.12
PPARG-213ENST00000477039 VSIG10Q8N0Z9 540 aa14.3□□□□□ -0.12
PPARG-213ENST00000477039 BICRAQ9NZM4 1560 aa14.28□□□□□ -0.12
PPARG-213ENST00000477039 CECR2Q9BXF3 1484 aa14.28□□□□□ -0.12
PPARG-213ENST00000477039 BAZ1AQ9NRL2 1556 aaPredicted RBP14.28□□□□□ -0.12
PPARG-213ENST00000477039 MYCNP04198 464 aaPredicted RBP14.27□□□□□ -0.13
PPARG-213ENST00000477039 MROH2BQ7Z745 1585 aa14.25□□□□□ -0.13
PPARG-213ENST00000477039 DAXXQ9UER7 740 aaPredicted RBP14.22□□□□□ -0.13
PPARG-213ENST00000477039 TPRNQ4KMQ1 711 aa14.19□□□□□ -0.14
PPARG-213ENST00000477039 SMARCA4P51532 1647 aa14.16□□□□□ -0.14
PPARG-213ENST00000477039 WIZO95785 1651 aa14.15□□□□□ -0.14
PPARG-213ENST00000477039 SLC4A2P04920 1241 aa14.14□□□□□ -0.15
PPARG-213ENST00000477039 CC2D2AQ9P2K1 1620 aa14.12□□□□□ -0.15
PPARG-213ENST00000477039 DNAJC5Q9H3Z4 198 aa14.12□□□□□ -0.15
PPARG-213ENST00000477039 FBXO3Q9UK99 471 aa14.1□□□□□ -0.15
PPARG-213ENST00000477039 ARXQ96QS3 562 aa14.07□□□□□ -0.16
PPARG-213ENST00000477039 TOP2AP11388 1531 aaKnown RBP14.05□□□□□ -0.16
PPARG-213ENST00000477039 EIF4G1Q04637 1599 aaKnown RBP14□□□□□ -0.17
PPARG-213ENST00000477039 ERICH6Q7L0X2 663 aa14□□□□□ -0.17
PPARG-213ENST00000477039 PEG3Q9GZU2 1588 aa14□□□□□ -0.17
PPARG-213ENST00000477039 MAPK8IP2Q13387 824 aaPredicted RBP13.96□□□□□ -0.17
PPARG-213ENST00000477039 SMARCA2P51531 1590 aa13.91□□□□□ -0.18
PPARG-213ENST00000477039 TIMELESSQ9UNS1 1208 aa13.9□□□□□ -0.18
PPARG-213ENST00000477039 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.9□□□□□ -0.18
PPARG-213ENST00000477039 HOXD11P31277 338 aaPredicted RBP13.88□□□□□ -0.19
PPARG-213ENST00000477039 CCDC88BA6NC98 1476 aa13.87□□□□□ -0.19
PPARG-213ENST00000477039 TRIM41Q8WV44 630 aa13.86□□□□□ -0.19
PPARG-213ENST00000477039 ATAD2BQ9ULI0 1458 aa13.85□□□□□ -0.19
PPARG-213ENST00000477039 TULP1O00294 542 aaPredicted RBP13.84□□□□□ -0.19
PPARG-213ENST00000477039 KDM2AQ9Y2K7 1162 aa13.81□□□□□ -0.2
PPARG-213ENST00000477039 BAZ1BQ9UIG0 1483 aaKnown RBP13.81□□□□□ -0.2
PPARG-213ENST00000477039 MSH5O43196 834 aa13.78□□□□□ -0.2
PPARG-213ENST00000477039 BBXQ8WY36 941 aaPredicted RBP13.78□□□□□ -0.2
PPARG-213ENST00000477039 VASPP50552 380 aaPredicted RBP13.76□□□□□ -0.21
PPARG-213ENST00000477039 GTF3C3Q9Y5Q9 886 aa13.76□□□□□ -0.21
PPARG-213ENST00000477039 HMGXB3Q12766 1538 aa13.74□□□□□ -0.21
PPARG-213ENST00000477039 NCAPD3P42695 1498 aa13.7□□□□□ -0.22
PPARG-213ENST00000477039 CUX2O14529 1486 aa13.7□□□□□ -0.22
PPARG-213ENST00000477039 FBLN2P98095 1184 aa13.7□□□□□ -0.22
PPARG-213ENST00000477039 HOMEZQ8IX15 550 aa13.7□□□□□ -0.22
PPARG-213ENST00000477039 PKD2Q13563 968 aa13.67□□□□□ -0.22
PPARG-213ENST00000477039 PAXIP1Q6ZW49 1069 aaPredicted RBP13.67□□□□□ -0.22
PPARG-213ENST00000477039 ABCC8Q09428 1581 aa13.64□□□□□ -0.23
PPARG-213ENST00000477039 LOC105371045A0A1W2PR82 267 aa13.64□□□□□ -0.23
PPARG-213ENST00000477039 CFAP44Q96MT7 982 aa13.63□□□□□ -0.23
PPARG-213ENST00000477039 DMRT2Q9Y5R5 561 aa13.63□□□□□ -0.23
PPARG-213ENST00000477039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
PPARG-213ENST00000477039 NBR1Q14596 966 aa13.61□□□□□ -0.23
PPARG-213ENST00000477039 HNRNPUL2Q1KMD3 747 aaKnown RBP13.61□□□□□ -0.23
PPARG-213ENST00000477039 ATF5Q9Y2D1 282 aaPredicted RBP13.61□□□□□ -0.23
PPARG-213ENST00000477039 IFNLR1Q8IU57 520 aaPredicted RBP13.61□□□□□ -0.23
PPARG-213ENST00000477039 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
PPARG-213ENST00000477039 SAMD1Q6SPF0 538 aaPredicted RBP13.59□□□□□ -0.23
PPARG-213ENST00000477039 ERCC6Q03468 1493 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms