RNA–Protein interactions for RNA: ENST00000476931.1

RPN1-202, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-202ENST00000476931 ARHGEF11O15085 1522 aa27.77■■■□□ 2.04
RPN1-202ENST00000476931 KIF21BO75037 1637 aa27.72■■■□□ 2.03
RPN1-202ENST00000476931 SHROOM2Q13796 1616 aa27.71■■■□□ 2.03
RPN1-202ENST00000476931 PRG4Q92954 1404 aaPredicted RBP27.7■■■□□ 2.03
RPN1-202ENST00000476931 RIMBP3CA6NJZ7 1639 aa27.68■■■□□ 2.02
RPN1-202ENST00000476931 RIMBP3BA6NNM3 1639 aa27.68■■■□□ 2.02
RPN1-202ENST00000476931 RIMBP3Q9UFD9 1639 aa27.68■■■□□ 2.02
RPN1-202ENST00000476931 IQGAP2Q13576 1575 aa27.68■■■□□ 2.02
RPN1-202ENST00000476931 UBTFP17480 764 aaKnown RBP27.65■■■□□ 2.02
RPN1-202ENST00000476931 GOLGA3Q08378 1498 aa27.64■■■□□ 2.02
RPN1-202ENST00000476931 CARMIL2Q6F5E8 1435 aa27.64■■■□□ 2.02
RPN1-202ENST00000476931 CYB5RLQ6IPT4 315 aa27.62■■■□□ 2.01
RPN1-202ENST00000476931 UGGT2Q9NYU1 1516 aa27.59■■■□□ 2.01
RPN1-202ENST00000476931 CTTNBP2Q8WZ74 1663 aa27.56■■■□□ 2
RPN1-202ENST00000476931 ARAP1Q96P48 1450 aa27.55■■■□□ 2
RPN1-202ENST00000476931 EHMT2Q96KQ7 1210 aa27.52■■■□□ 2
RPN1-202ENST00000476931 ERCC6L2Q5T890 1561 aa27.52■■■□□ 2
RPN1-202ENST00000476931 TNIKQ9UKE5 1360 aa27.5■■□□□ 1.99
RPN1-202ENST00000476931 DISP1Q96F81 1524 aa27.48■■□□□ 1.99
RPN1-202ENST00000476931 PTPRGP23470 1445 aa27.47■■□□□ 1.99
RPN1-202ENST00000476931 KIAA0556O60303 1618 aa27.38■■□□□ 1.97
RPN1-202ENST00000476931 RANGAP1P46060 587 aaPredicted RBP27.37■■□□□ 1.97
RPN1-202ENST00000476931 P3H3Q8IVL6 736 aa27.33■■□□□ 1.97
RPN1-202ENST00000476931 TTBK1Q5TCY1 1321 aaPredicted RBP27.33■■□□□ 1.97
RPN1-202ENST00000476931 EFCAB5A4FU69 1503 aa27.31■■□□□ 1.96
RPN1-202ENST00000476931 LOC105371045A0A1W2PR82 267 aa27.3■■□□□ 1.96
RPN1-202ENST00000476931 NPM1P06748 294 aaKnown RBP eCLIP27.3■■□□□ 1.96
RPN1-202ENST00000476931 SAMD9Q5K651 1589 aa27.3■■□□□ 1.96
RPN1-202ENST00000476931 UACAQ9BZF9 1416 aa27.26■■□□□ 1.95
RPN1-202ENST00000476931 UHRF1BP1LA0JNW5 1464 aa27.22■■□□□ 1.95
RPN1-202ENST00000476931 ARHGAP35Q9NRY4 1499 aa27.19■■□□□ 1.94
RPN1-202ENST00000476931 FHOD3Q2V2M9 1422 aa27.17■■□□□ 1.94
RPN1-202ENST00000476931 CLIP1P30622 1438 aa27.16■■□□□ 1.94
RPN1-202ENST00000476931 ABCC2Q92887 1545 aa27.14■■□□□ 1.94
RPN1-202ENST00000476931 FMN1Q68DA7 1419 aa27.14■■□□□ 1.93
RPN1-202ENST00000476931 PLB1Q6P1J6 1458 aa27.13■■□□□ 1.93
RPN1-202ENST00000476931 ADCY10Q96PN6 1610 aa27.12■■□□□ 1.93
RPN1-202ENST00000476931 ABCA8O94911 1581 aa27.09■■□□□ 1.93
RPN1-202ENST00000476931 CEP162Q5TB80 1403 aa27.08■■□□□ 1.93
RPN1-202ENST00000476931 KDM5BQ9UGL1 1544 aa27.06■■□□□ 1.92
RPN1-202ENST00000476931 RAPGEF6Q8TEU7 1601 aa26.99■■□□□ 1.91
RPN1-202ENST00000476931 MAPKBP1O60336 1514 aa26.99■■□□□ 1.91
RPN1-202ENST00000476931 TRHP20396 242 aaPredicted RBP26.97■■□□□ 1.91
RPN1-202ENST00000476931 ATP10BO94823 1461 aa26.94■■□□□ 1.9
RPN1-202ENST00000476931 ATP1B4Q9UN42 357 aaPredicted RBP26.94■■□□□ 1.9
RPN1-202ENST00000476931 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.93■■□□□ 1.9
RPN1-202ENST00000476931 HNRNPUL2Q1KMD3 747 aaKnown RBP26.93■■□□□ 1.9
RPN1-202ENST00000476931 NUP153P49790 1475 aaKnown RBP26.93■■□□□ 1.9
RPN1-202ENST00000476931 ASXL2Q76L83 1435 aa26.91■■□□□ 1.9
RPN1-202ENST00000476931 CASKIN1Q8WXD9 1431 aa26.9■■□□□ 1.9
RPN1-202ENST00000476931 ZCCHC11Q5TAX3 1644 aaKnown RBP26.88■■□□□ 1.89
RPN1-202ENST00000476931 PLEKHD1A6NEE1 506 aa26.88■■□□□ 1.89
RPN1-202ENST00000476931 ARID3CA6NKF2 412 aa26.88■■□□□ 1.89
RPN1-202ENST00000476931 CDK11AQ9UQ88 783 aaPredicted RBP26.88■■□□□ 1.89
RPN1-202ENST00000476931 ABCC10Q5T3U5 1492 aa26.86■■□□□ 1.89
RPN1-202ENST00000476931 FAM69CQ0P6D2 419 aa26.85■■□□□ 1.89
RPN1-202ENST00000476931 HECW1Q76N89 1606 aa26.83■■□□□ 1.89
RPN1-202ENST00000476931 FYCO1Q9BQS8 1478 aa26.82■■□□□ 1.88
RPN1-202ENST00000476931 WDR7Q9Y4E6 1490 aa26.81■■□□□ 1.88
RPN1-202ENST00000476931 EPRSP07814 1512 aaKnown RBP26.81■■□□□ 1.88
RPN1-202ENST00000476931 KCNH8Q96L42 1107 aa26.78■■□□□ 1.88
RPN1-202ENST00000476931 CCDC18Q5T9S5 1454 aa26.77■■□□□ 1.88
RPN1-202ENST00000476931 VPS8Q8N3P4 1428 aa26.77■■□□□ 1.88
RPN1-202ENST00000476931 PCF11O94913 1555 aaKnown RBP26.73■■□□□ 1.87
RPN1-202ENST00000476931 GLI2P10070 1586 aa26.71■■□□□ 1.87
RPN1-202ENST00000476931 DIP2BQ9P265 1576 aa26.71■■□□□ 1.87
RPN1-202ENST00000476931 CDK13Q14004 1512 aaKnown RBP26.7■■□□□ 1.86
RPN1-202ENST00000476931 APLP2Q06481 763 aa26.63■■□□□ 1.85
RPN1-202ENST00000476931 TROQ12816 1431 aaPredicted RBP26.63■■□□□ 1.85
RPN1-202ENST00000476931 KIF13AQ9H1H9 1805 aa26.62■■□□□ 1.85
RPN1-202ENST00000476931 CD109Q6YHK3 1445 aa26.6■■□□□ 1.85
RPN1-202ENST00000476931 MAP3K1Q13233 1512 aa26.55■■□□□ 1.84
RPN1-202ENST00000476931 MTUS2Q5JR59 1369 aa26.55■■□□□ 1.84
RPN1-202ENST00000476931 LRRIQ1Q96JM4 1722 aa26.54■■□□□ 1.84
RPN1-202ENST00000476931 ABCA9Q8IUA7 1624 aa26.52■■□□□ 1.84
RPN1-202ENST00000476931 TEX14Q8IWB6 1497 aa26.52■■□□□ 1.84
RPN1-202ENST00000476931 CFAP43Q8NDM7 1665 aa26.51■■□□□ 1.83
RPN1-202ENST00000476931 MAP3K4Q9Y6R4 1608 aa26.51■■□□□ 1.83
RPN1-202ENST00000476931 MAGI3Q5TCQ9 1506 aa26.51■■□□□ 1.83
RPN1-202ENST00000476931 PHLDB1Q86UU1 1377 aa26.48■■□□□ 1.83
RPN1-202ENST00000476931 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.47■■□□□ 1.836e-13■■■■□ 25
RPN1-202ENST00000476931 KIF14Q15058 1648 aa26.46■■□□□ 1.83
RPN1-202ENST00000476931 TIAM1Q13009 1591 aa26.46■■□□□ 1.83
RPN1-202ENST00000476931 PLCH2O75038 1416 aa26.44■■□□□ 1.82
RPN1-202ENST00000476931 EHBP1L1Q8N3D4 1523 aa26.41■■□□□ 1.82
RPN1-202ENST00000476931 EFCAB2Q5VUJ9 269 aa26.41■■□□□ 1.82
RPN1-202ENST00000476931 LRRC9Q6ZRR7 1453 aa26.41■■□□□ 1.82
RPN1-202ENST00000476931 TSPOAP1O95153 1857 aa26.4■■□□□ 1.82
RPN1-202ENST00000476931 KANK4Q5T7N3 995 aaPredicted RBP26.39■■□□□ 1.82
RPN1-202ENST00000476931 NEO1Q92859 1461 aa26.37■■□□□ 1.81
RPN1-202ENST00000476931 ARAP3Q8WWN8 1544 aa26.36■■□□□ 1.81
RPN1-202ENST00000476931 CCNB3Q8WWL7 1395 aa26.35■■□□□ 1.81
RPN1-202ENST00000476931 PPRC1Q5VV67 1664 aaKnown RBP26.35■■□□□ 1.81
RPN1-202ENST00000476931 TTC37Q6PGP7 1564 aa26.35■■□□□ 1.81
RPN1-202ENST00000476931 FANCAO15360 1455 aa26.33■■□□□ 1.81
RPN1-202ENST00000476931 CFDP1Q9UEE9 299 aaPredicted RBP26.3■■□□□ 1.8
RPN1-202ENST00000476931 AKNAQ7Z591 1439 aa26.3■■□□□ 1.8
RPN1-202ENST00000476931 GPATCH8Q9UKJ3 1502 aaKnown RBP26.29■■□□□ 1.8
RPN1-202ENST00000476931 NCOA2Q15596 1464 aa26.28■■□□□ 1.8
RPN1-202ENST00000476931 SUPT6HQ7KZ85 1726 aaKnown RBP26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms