RNA–Protein interactions for RNA: ENST00000476931.1

RPN1-202, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-202ENST00000476931 DDX3XO00571 662 aaKnown RBP eCLIP17.67■□□□□ 0.421e-20■■■■■ 56.9
RPN1-202ENST00000476931 G3BP1Q13283 466 aaKnown RBP eCLIP21■□□□□ 0.951e-11■■■■■ 36.6
RPN1-202ENST00000476931 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.47■■□□□ 1.836e-13■■■■□ 25
RPN1-202ENST00000476931 RPS3P23396 243 aaKnown RBP eCLIP16.65■□□□□ 0.268e-18■■■■□ 24.9
RPN1-202ENST00000476931 EFTUD2Q15029 972 aaKnown RBP eCLIP16.41■□□□□ 0.225e-7■■■■□ 24.4
RPN1-202ENST00000476931 SND1Q7KZF4 910 aaKnown RBP eCLIP17.62■□□□□ 0.413e-11■■■■□ 22.4
RPN1-202ENST00000476931 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.93■□□□□ 0.34e-16■■■□□ 18.4
RPN1-202ENST00000476931 AQRO60306 1485 aaKnown RBP eCLIP28.71■■■□□ 2.197e-7■■■□□ 17.9
RPN1-202ENST00000476931 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.05□□□□□ -0.161e-29■■■□□ 15.9
RPN1-202ENST00000476931 PCBP1Q15365 356 aaKnown RBP eCLIP18.77■□□□□ 0.61e-6■■□□□ 13.9
RPN1-202ENST00000476931 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.73■□□□□ 0.595e-9■■□□□ 12.2
RPN1-202ENST00000476931 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.19■□□□□ 0.341e-13■■□□□ 11.9
RPN1-202ENST00000476931 FMR1Q06787 632 aaKnown RBP eCLIP20.32■□□□□ 0.841e-9■■□□□ 11.8
RPN1-202ENST00000476931 RBM15Q96T37 977 aaKnown RBP eCLIP17.02■□□□□ 0.323e-6■■□□□ 11.6
RPN1-202ENST00000476931 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.81■□□□□ 0.128e-8■□□□□ 9.9
RPN1-202ENST00000476931 METAP2P50579 478 aaKnown RBP eCLIP19.64■□□□□ 0.733e-7■□□□□ 9.8
RPN1-202ENST00000476931 GPKOWQ92917 476 aaPredicted RBP eCLIP19.44■□□□□ 0.72e-11■□□□□ 9.7
Retrieved 17 of 17 RNA–protein pairs in 5.6 ms