RNA–Protein interactions for RNA: ENST00000469150.1

LRRC41-202, Transcript of leucine rich repeat containing 41, humanhuman

TSL 1 (best)

Gene LRRC41, Length 3,389 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-202ENST00000469150 CHIC1Q5VXU3 224 aa16.72■□□□□ 0.27
LRRC41-202ENST00000469150 AEBP2Q6ZN18 517 aaPredicted RBP16.04■□□□□ 0.16
LRRC41-202ENST00000469150 EHMT2Q96KQ7 1210 aa15.16■□□□□ 0.02
LRRC41-202ENST00000469150 PHF23Q9BUL5 403 aaPredicted RBP15.05■□□□□ -0
LRRC41-202ENST00000469150 SLC24A1O60721 1099 aa14.98□□□□□ -0.01
LRRC41-202ENST00000469150 PLPPR3Q6T4P5 718 aa14.32□□□□□ -0.12
LRRC41-202ENST00000469150 KCNA4P22459 653 aa14.19□□□□□ -0.14
LRRC41-202ENST00000469150 RTN4Q9NQC3 1192 aaKnown RBP14.09□□□□□ -0.15
LRRC41-202ENST00000469150 CSRNP3Q8WYN3 585 aa14.06□□□□□ -0.16
LRRC41-202ENST00000469150 AMER1Q5JTC6 1135 aaPredicted RBP13.69□□□□□ -0.22
LRRC41-202ENST00000469150 SLC4A1APQ9BWU0 796 aaKnown RBP13.63□□□□□ -0.23
LRRC41-202ENST00000469150 ADRA2BP18089 450 aa13.6□□□□□ -0.23
LRRC41-202ENST00000469150 NCBP3Q53F19 620 aaKnown RBP13.3□□□□□ -0.28
LRRC41-202ENST00000469150 PRKCSHP14314 528 aaPredicted RBP13.27□□□□□ -0.28
LRRC41-202ENST00000469150 ZBTB22O15209 634 aa13.12□□□□□ -0.31
LRRC41-202ENST00000469150 SENP3Q9H4L4 574 aaPredicted RBP13.09□□□□□ -0.31
LRRC41-202ENST00000469150 DAXXQ9UER7 740 aaPredicted RBP12.98□□□□□ -0.33
LRRC41-202ENST00000469150 PPP6R1Q9UPN7 881 aa12.97□□□□□ -0.33
LRRC41-202ENST00000469150 TAOK2Q9UL54 1235 aa12.8□□□□□ -0.36
LRRC41-202ENST00000469150 NPM3O75607 178 aaKnown RBP12.77□□□□□ -0.37
LRRC41-202ENST00000469150 PPP4R3CPQ6ZMV5 832 aa12.75□□□□□ -0.37
LRRC41-202ENST00000469150 TIMELESSQ9UNS1 1208 aa12.73□□□□□ -0.37
LRRC41-202ENST00000469150 FKBP8Q14318 412 aa12.72□□□□□ -0.37
LRRC41-202ENST00000469150 BCANQ96GW7 911 aa12.7□□□□□ -0.38
LRRC41-202ENST00000469150 TPRNQ4KMQ1 711 aa12.7□□□□□ -0.38
LRRC41-202ENST00000469150 HAP1P54257 671 aaPredicted RBP12.67□□□□□ -0.38
LRRC41-202ENST00000469150 PLCB2Q00722 1185 aa12.67□□□□□ -0.38
LRRC41-202ENST00000469150 TULP1O00294 542 aaPredicted RBP12.63□□□□□ -0.39
LRRC41-202ENST00000469150 ARXQ96QS3 562 aa12.49□□□□□ -0.41
LRRC41-202ENST00000469150 FOXD4L1Q9NU39 408 aa12.43□□□□□ -0.42
LRRC41-202ENST00000469150 DCAF8L2P0C7V8 631 aa12.36□□□□□ -0.43
LRRC41-202ENST00000469150 HOMEZQ8IX15 550 aa12.24□□□□□ -0.45
LRRC41-202ENST00000469150 GTF3C3Q9Y5Q9 886 aa12.24□□□□□ -0.45
LRRC41-202ENST00000469150 FOXD1Q16676 465 aa12.21□□□□□ -0.45
LRRC41-202ENST00000469150 KDM2AQ9Y2K7 1162 aa12.18□□□□□ -0.46
LRRC41-202ENST00000469150 VSIG10Q8N0Z9 540 aa12.17□□□□□ -0.46
LRRC41-202ENST00000469150 FBLN2P98095 1184 aa12.16□□□□□ -0.46
LRRC41-202ENST00000469150 RANGAP1P46060 587 aaPredicted RBP12.1□□□□□ -0.47
LRRC41-202ENST00000469150 PODXL2Q9NZ53 605 aa12.06□□□□□ -0.48
LRRC41-202ENST00000469150 C14orf37Q86TY3 774 aa11.97□□□□□ -0.49
LRRC41-202ENST00000469150 TMEM132AQ24JP5 1023 aa11.95□□□□□ -0.5
LRRC41-202ENST00000469150 CNKSR2Q8WXI2 1034 aa11.95□□□□□ -0.5
LRRC41-202ENST00000469150 PIAS4Q8N2W9 510 aaPredicted RBP11.9□□□□□ -0.5
LRRC41-202ENST00000469150 CFAP44Q96MT7 982 aa11.88□□□□□ -0.51
LRRC41-202ENST00000469150 PAXIP1Q6ZW49 1069 aaPredicted RBP11.86□□□□□ -0.51
LRRC41-202ENST00000469150 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
LRRC41-202ENST00000469150 SUPT5HO00267 1087 aaKnown RBP11.84□□□□□ -0.51
LRRC41-202ENST00000469150 ERICH6Q7L0X2 663 aa11.78□□□□□ -0.52
LRRC41-202ENST00000469150 NBR1Q14596 966 aa11.75□□□□□ -0.53
LRRC41-202ENST00000469150 TSHZ2Q9NRE2 1034 aa11.75□□□□□ -0.53
LRRC41-202ENST00000469150 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.74□□□□□ -0.53
LRRC41-202ENST00000469150 PKD2Q13563 968 aa11.68□□□□□ -0.54
LRRC41-202ENST00000469150 NPM2Q86SE8 214 aaKnown RBP11.66□□□□□ -0.54
LRRC41-202ENST00000469150 SLC4A2P04920 1241 aa11.66□□□□□ -0.54
LRRC41-202ENST00000469150 NPM1P06748 294 aaKnown RBP eCLIP11.65□□□□□ -0.54
LRRC41-202ENST00000469150 TRIM26Q12899 539 aaPredicted RBP11.6□□□□□ -0.55
LRRC41-202ENST00000469150 ATXN8OSP0DMR3 200 aa11.59□□□□□ -0.55
LRRC41-202ENST00000469150 UBTFP17480 764 aaKnown RBP11.59□□□□□ -0.55
LRRC41-202ENST00000469150 BBXQ8WY36 941 aaPredicted RBP11.58□□□□□ -0.56
LRRC41-202ENST00000469150 IFNLR1Q8IU57 520 aaPredicted RBP11.57□□□□□ -0.56
LRRC41-202ENST00000469150 VASPP50552 380 aaPredicted RBP11.54□□□□□ -0.56
LRRC41-202ENST00000469150 FBXO3Q9UK99 471 aa11.53□□□□□ -0.56
LRRC41-202ENST00000469150 MYCNP04198 464 aaPredicted RBP11.51□□□□□ -0.57
LRRC41-202ENST00000469150 APLP2Q06481 763 aa11.51□□□□□ -0.57
LRRC41-202ENST00000469150 MAPK8IP2Q13387 824 aaPredicted RBP11.49□□□□□ -0.57
LRRC41-202ENST00000469150 DNAJC5BQ9UF47 199 aa11.49□□□□□ -0.57
LRRC41-202ENST00000469150 SCAF1Q9H7N4 1312 aaKnown RBP11.49□□□□□ -0.57
LRRC41-202ENST00000469150 SPRYD3Q8NCJ5 442 aa11.48□□□□□ -0.57
LRRC41-202ENST00000469150 ATF5Q9Y2D1 282 aaPredicted RBP11.44□□□□□ -0.58
LRRC41-202ENST00000469150 HRCP23327 699 aa11.41□□□□□ -0.58
LRRC41-202ENST00000469150 ECM2O94769 699 aaPredicted RBP11.37□□□□□ -0.59
LRRC41-202ENST00000469150 RNF216Q9NWF9 866 aaPredicted RBP11.34□□□□□ -0.59
LRRC41-202ENST00000469150 PELP1Q8IZL8 1130 aaKnown RBP11.33□□□□□ -0.6
LRRC41-202ENST00000469150 RGL2O15211 777 aa11.3□□□□□ -0.6
LRRC41-202ENST00000469150 ARID3AQ99856 593 aa11.29□□□□□ -0.6
LRRC41-202ENST00000469150 TRHP20396 242 aaPredicted RBP11.28□□□□□ -0.6
LRRC41-202ENST00000469150 SPDYE4A6NLX3 237 aa11.26□□□□□ -0.61
LRRC41-202ENST00000469150 CHGAP10645 457 aaKnown RBP11.25□□□□□ -0.61
LRRC41-202ENST00000469150 DNAJC5Q9H3Z4 198 aa11.2□□□□□ -0.62
LRRC41-202ENST00000469150 BRPF1P55201 1214 aaPredicted RBP11.19□□□□□ -0.62
LRRC41-202ENST00000469150 LOC105371045A0A1W2PR82 267 aa11.11□□□□□ -0.63
LRRC41-202ENST00000469150 TTBK1Q5TCY1 1321 aaPredicted RBP11.09□□□□□ -0.63
LRRC41-202ENST00000469150 NEUROD2Q15784 382 aa11.09□□□□□ -0.63
LRRC41-202ENST00000469150 MYT1Q01538 1121 aa11.04□□□□□ -0.64
LRRC41-202ENST00000469150 EIF5BO60841 1220 aaKnown RBP11.03□□□□□ -0.64
LRRC41-202ENST00000469150 SPOCK2Q92563 424 aa11.03□□□□□ -0.64
LRRC41-202ENST00000469150 PROM2Q8N271 834 aa11□□□□□ -0.65
LRRC41-202ENST00000469150 LMOD2Q6P5Q4 547 aa10.99□□□□□ -0.65
LRRC41-202ENST00000469150 CCDC9Q9Y3X0 531 aaKnown RBP10.99□□□□□ -0.65
LRRC41-202ENST00000469150 ARID3CA6NKF2 412 aa10.95□□□□□ -0.66
LRRC41-202ENST00000469150 C1orf115Q9H7X2 142 aa10.95□□□□□ -0.66
LRRC41-202ENST00000469150 HOXD11P31277 338 aaPredicted RBP10.92□□□□□ -0.66
LRRC41-202ENST00000469150 ZBTB7CA1YPR0 619 aa10.92□□□□□ -0.66
LRRC41-202ENST00000469150 RSPH6AQ9H0K4 717 aa10.91□□□□□ -0.66
LRRC41-202ENST00000469150 NECTIN2Q92692 538 aa10.91□□□□□ -0.66
LRRC41-202ENST00000469150 ZMYND15Q9H091 742 aa10.91□□□□□ -0.66
LRRC41-202ENST00000469150 MKRN4PQ13434 485 aaPredicted RBP10.9□□□□□ -0.66
LRRC41-202ENST00000469150 CIZ1Q9ULV3 898 aaPredicted RBP10.89□□□□□ -0.67
LRRC41-202ENST00000469150 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.87□□□□□ -0.67
LRRC41-202ENST00000469150 SLC24A3Q9HC58 644 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms