RNA–Protein interactions for RNA: ENST00000468134.1

LRMDA-202, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-202ENST00000468134 CHIC1Q5VXU3 224 aa10.66□□□□□ -0.7
LRMDA-202ENST00000468134 AEBP2Q6ZN18 517 aaPredicted RBP10.35□□□□□ -0.75
LRMDA-202ENST00000468134 PHF23Q9BUL5 403 aaPredicted RBP9.38□□□□□ -0.91
LRMDA-202ENST00000468134 DNAJC5Q9H3Z4 198 aa8.95□□□□□ -0.98
LRMDA-202ENST00000468134 PLPPR3Q6T4P5 718 aa8.91□□□□□ -0.98
LRMDA-202ENST00000468134 SENP3Q9H4L4 574 aaPredicted RBP8.78□□□□□ -1
LRMDA-202ENST00000468134 DNAJC5BQ9UF47 199 aa8.78□□□□□ -1
LRMDA-202ENST00000468134 EHMT2Q96KQ7 1210 aa8.33□□□□□ -1.08
LRMDA-202ENST00000468134 KCNA4P22459 653 aa8.26□□□□□ -1.09
LRMDA-202ENST00000468134 ADRA2BP18089 450 aa8.24□□□□□ -1.09
LRMDA-202ENST00000468134 PPP6R1Q9UPN7 881 aa8.1□□□□□ -1.11
LRMDA-202ENST00000468134 FOXD1Q16676 465 aa8.03□□□□□ -1.12
LRMDA-202ENST00000468134 TRIM41Q8WV44 630 aa8.03□□□□□ -1.12
LRMDA-202ENST00000468134 ILDR1Q86SU0 546 aaPredicted RBP8□□□□□ -1.13
LRMDA-202ENST00000468134 SLC4A1APQ9BWU0 796 aaKnown RBP8□□□□□ -1.13
LRMDA-202ENST00000468134 CSRNP3Q8WYN3 585 aa7.98□□□□□ -1.13
LRMDA-202ENST00000468134 ABCC9O60706 1549 aa7.9□□□□□ -1.14
LRMDA-202ENST00000468134 NCBP3Q53F19 620 aaKnown RBP7.89□□□□□ -1.15
LRMDA-202ENST00000468134 PPP4R3CPQ6ZMV5 832 aa7.89□□□□□ -1.15
LRMDA-202ENST00000468134 PIAS4Q8N2W9 510 aaPredicted RBP7.73□□□□□ -1.17
LRMDA-202ENST00000468134 NPM3O75607 178 aaKnown RBP7.7□□□□□ -1.18
LRMDA-202ENST00000468134 SLC24A1O60721 1099 aa7.6□□□□□ -1.19
LRMDA-202ENST00000468134 ZBTB22O15209 634 aa7.58□□□□□ -1.2
LRMDA-202ENST00000468134 CNKSR2Q8WXI2 1034 aa7.58□□□□□ -1.2
LRMDA-202ENST00000468134 SCAF1Q9H7N4 1312 aaKnown RBP7.54□□□□□ -1.2
LRMDA-202ENST00000468134 AMER1Q5JTC6 1135 aaPredicted RBP7.51□□□□□ -1.21
LRMDA-202ENST00000468134 FOXD4L1Q9NU39 408 aa7.49□□□□□ -1.21
LRMDA-202ENST00000468134 RTN4Q9NQC3 1192 aaKnown RBP7.44□□□□□ -1.22
LRMDA-202ENST00000468134 SOCS7O14512 581 aa7.42□□□□□ -1.22
LRMDA-202ENST00000468134 LMTK3Q96Q04 1460 aa7.36□□□□□ -1.23
LRMDA-202ENST00000468134 ILDR2Q71H61 639 aa7.34□□□□□ -1.23
LRMDA-202ENST00000468134 RNF216Q9NWF9 866 aaPredicted RBP7.31□□□□□ -1.24
LRMDA-202ENST00000468134 MSH5O43196 834 aa7.27□□□□□ -1.25
LRMDA-202ENST00000468134 CUX2O14529 1486 aa7.26□□□□□ -1.25
LRMDA-202ENST00000468134 PABPN1Q86U42 306 aaKnown RBP eCLIP7.25□□□□□ -1.25
LRMDA-202ENST00000468134 CECR2Q9BXF3 1484 aa7.23□□□□□ -1.25
LRMDA-202ENST00000468134 MAPK8IP2Q13387 824 aaPredicted RBP7.22□□□□□ -1.25
LRMDA-202ENST00000468134 ATXN8OSP0DMR3 200 aa7.21□□□□□ -1.26
LRMDA-202ENST00000468134 FKBP8Q14318 412 aa7.21□□□□□ -1.26
LRMDA-202ENST00000468134 MYCNP04198 464 aaPredicted RBP7.15□□□□□ -1.26
LRMDA-202ENST00000468134 SLC4A2P04920 1241 aa7.13□□□□□ -1.27
LRMDA-202ENST00000468134 HOXD11P31277 338 aaPredicted RBP7.13□□□□□ -1.27
LRMDA-202ENST00000468134 TRHP20396 242 aaPredicted RBP7.11□□□□□ -1.27
LRMDA-202ENST00000468134 FBXO41Q8TF61 875 aa7.07□□□□□ -1.28
LRMDA-202ENST00000468134 DMRT2Q9Y5R5 561 aa7.07□□□□□ -1.28
LRMDA-202ENST00000468134 CC2D2AQ9P2K1 1620 aa7.03□□□□□ -1.28
LRMDA-202ENST00000468134 DISP3Q9P2K9 1392 aa7.02□□□□□ -1.29
LRMDA-202ENST00000468134 NISCHQ9Y2I1 1504 aa6.93□□□□□ -1.3
LRMDA-202ENST00000468134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.89□□□□□ -1.31
LRMDA-202ENST00000468134 HNRNPUL2Q1KMD3 747 aaKnown RBP6.89□□□□□ -1.31
LRMDA-202ENST00000468134 PLCB2Q00722 1185 aa6.88□□□□□ -1.31
LRMDA-202ENST00000468134 FBXO3Q9UK99 471 aa6.88□□□□□ -1.31
LRMDA-202ENST00000468134 SAMD1Q6SPF0 538 aaPredicted RBP6.87□□□□□ -1.31
LRMDA-202ENST00000468134 RIMBP3CA6NJZ7 1639 aa6.86□□□□□ -1.31
LRMDA-202ENST00000468134 RIMBP3BA6NNM3 1639 aa6.86□□□□□ -1.31
LRMDA-202ENST00000468134 RIMBP3Q9UFD9 1639 aa6.86□□□□□ -1.31
LRMDA-202ENST00000468134 ERCC6Q03468 1493 aa6.85□□□□□ -1.31
LRMDA-202ENST00000468134 ATF5Q9Y2D1 282 aaPredicted RBP6.84□□□□□ -1.31
LRMDA-202ENST00000468134 ERCC6L2Q5T890 1561 aa6.82□□□□□ -1.32
LRMDA-202ENST00000468134 KDM4FA0A1W2PPD8 638 aa6.81□□□□□ -1.32
LRMDA-202ENST00000468134 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.81□□□□□ -1.32
LRMDA-202ENST00000468134 HAP1P54257 671 aaPredicted RBP6.79□□□□□ -1.32
LRMDA-202ENST00000468134 BCANQ96GW7 911 aa6.79□□□□□ -1.32
LRMDA-202ENST00000468134 RB1CC1Q8TDY2 1594 aa6.78□□□□□ -1.32
LRMDA-202ENST00000468134 CYB5RLQ6IPT4 315 aa6.76□□□□□ -1.33
LRMDA-202ENST00000468134 BICRAQ9NZM4 1560 aa6.76□□□□□ -1.33
LRMDA-202ENST00000468134 OSCARQ8IYS5 282 aa6.75□□□□□ -1.33
LRMDA-202ENST00000468134 DCAF8L1A6NGE4 600 aa6.74□□□□□ -1.33
LRMDA-202ENST00000468134 DCAF8L2P0C7V8 631 aa6.74□□□□□ -1.33
LRMDA-202ENST00000468134 SPATA31D1Q6ZQQ2 1576 aa6.74□□□□□ -1.33
LRMDA-202ENST00000468134 UNC13AQ9UPW8 1703 aa6.73□□□□□ -1.33
LRMDA-202ENST00000468134 SPDYE4A6NLX3 237 aa6.73□□□□□ -1.33
LRMDA-202ENST00000468134 VASPP50552 380 aaPredicted RBP6.72□□□□□ -1.33
LRMDA-202ENST00000468134 APLP2Q06481 763 aa6.72□□□□□ -1.33
LRMDA-202ENST00000468134 ZNF219Q9P2Y4 722 aaPredicted RBP6.72□□□□□ -1.33
LRMDA-202ENST00000468134 U3KPZ7 1027 aaPredicted RBP6.72□□□□□ -1.33
LRMDA-202ENST00000468134 HECW2Q9P2P5 1572 aa6.72□□□□□ -1.33
LRMDA-202ENST00000468134 VSIG10Q8N0Z9 540 aa6.71□□□□□ -1.34
LRMDA-202ENST00000468134 PROM2Q8N271 834 aa6.68□□□□□ -1.34
LRMDA-202ENST00000468134 ARHGEF11O15085 1522 aa6.67□□□□□ -1.34
LRMDA-202ENST00000468134 TAOK2Q9UL54 1235 aa6.67□□□□□ -1.34
LRMDA-202ENST00000468134 EIF4G1Q04637 1599 aaKnown RBP6.65□□□□□ -1.34
LRMDA-202ENST00000468134 BAZ1AQ9NRL2 1556 aaPredicted RBP6.65□□□□□ -1.35
LRMDA-202ENST00000468134 PRKCSHP14314 528 aaPredicted RBP6.64□□□□□ -1.35
LRMDA-202ENST00000468134 IFFO2Q5TF58 517 aa6.63□□□□□ -1.35
LRMDA-202ENST00000468134 IFNLR1Q8IU57 520 aaPredicted RBP6.63□□□□□ -1.35
LRMDA-202ENST00000468134 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.63□□□□□ -1.35
LRMDA-202ENST00000468134 SYNJ2O15056 1496 aa6.62□□□□□ -1.35
LRMDA-202ENST00000468134 FBLN2P98095 1184 aa6.62□□□□□ -1.35
LRMDA-202ENST00000468134 PKD2Q13563 968 aa6.61□□□□□ -1.35
LRMDA-202ENST00000468134 BBXQ8WY36 941 aaPredicted RBP6.59□□□□□ -1.35
LRMDA-202ENST00000468134 MKRN4PQ13434 485 aaPredicted RBP6.58□□□□□ -1.36
LRMDA-202ENST00000468134 THOC2Q8NI27 1593 aaKnown RBP6.57□□□□□ -1.36
LRMDA-202ENST00000468134 TPRNQ4KMQ1 711 aa6.56□□□□□ -1.36
LRMDA-202ENST00000468134 ARAP1Q96P48 1450 aa6.53□□□□□ -1.36
LRMDA-202ENST00000468134 PAXIP1Q6ZW49 1069 aaPredicted RBP6.53□□□□□ -1.36
LRMDA-202ENST00000468134 ECM2O94769 699 aaPredicted RBP6.52□□□□□ -1.37
LRMDA-202ENST00000468134 SPOCK2Q92563 424 aa6.52□□□□□ -1.37
LRMDA-202ENST00000468134 KDM2AQ9Y2K7 1162 aa6.52□□□□□ -1.37
LRMDA-202ENST00000468134 KLHL34Q8N239 644 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms