RNA–Protein interactions for RNA: ENST00000466552.1

HELLS-210, Transcript of helicase, lymphoid specific, humanhuman

TSL 2

Gene HELLS, Length 2,724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HELLS-210ENST00000466552 CHIC1Q5VXU3 224 aa19.9■□□□□ 0.78
HELLS-210ENST00000466552 AEBP2Q6ZN18 517 aaPredicted RBP19.31■□□□□ 0.68
HELLS-210ENST00000466552 PHF23Q9BUL5 403 aaPredicted RBP17.83■□□□□ 0.44
HELLS-210ENST00000466552 EHMT2Q96KQ7 1210 aa16.7■□□□□ 0.26
HELLS-210ENST00000466552 PLPPR3Q6T4P5 718 aa16.65■□□□□ 0.26
HELLS-210ENST00000466552 KCNA4P22459 653 aa16.18■□□□□ 0.18
HELLS-210ENST00000466552 SLC24A1O60721 1099 aa15.91■□□□□ 0.14
HELLS-210ENST00000466552 SENP3Q9H4L4 574 aaPredicted RBP15.88■□□□□ 0.13
HELLS-210ENST00000466552 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
HELLS-210ENST00000466552 ADRA2BP18089 450 aa15.85■□□□□ 0.13
HELLS-210ENST00000466552 SLC4A1APQ9BWU0 796 aaKnown RBP15.5■□□□□ 0.07
HELLS-210ENST00000466552 PPP6R1Q9UPN7 881 aa15.36■□□□□ 0.05
HELLS-210ENST00000466552 RTN4Q9NQC3 1192 aaKnown RBP15.34■□□□□ 0.05
HELLS-210ENST00000466552 AMER1Q5JTC6 1135 aaPredicted RBP15.06■□□□□ 0
HELLS-210ENST00000466552 ZBTB22O15209 634 aa15□□□□□ -0.01
HELLS-210ENST00000466552 PPP4R3CPQ6ZMV5 832 aa14.93□□□□□ -0.02
HELLS-210ENST00000466552 FOXD1Q16676 465 aa14.78□□□□□ -0.04
HELLS-210ENST00000466552 NPM3O75607 178 aaKnown RBP14.75□□□□□ -0.05
HELLS-210ENST00000466552 NCBP3Q53F19 620 aaKnown RBP14.71□□□□□ -0.06
HELLS-210ENST00000466552 FOXD4L1Q9NU39 408 aa14.34□□□□□ -0.11
HELLS-210ENST00000466552 FKBP8Q14318 412 aa14.22□□□□□ -0.13
HELLS-210ENST00000466552 PIAS4Q8N2W9 510 aaPredicted RBP14.19□□□□□ -0.14
HELLS-210ENST00000466552 PRKCSHP14314 528 aaPredicted RBP14.14□□□□□ -0.15
HELLS-210ENST00000466552 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
HELLS-210ENST00000466552 PLCB2Q00722 1185 aa13.92□□□□□ -0.18
HELLS-210ENST00000466552 DNAJC5BQ9UF47 199 aa13.89□□□□□ -0.19
HELLS-210ENST00000466552 TAOK2Q9UL54 1235 aa13.83□□□□□ -0.2
HELLS-210ENST00000466552 BCANQ96GW7 911 aa13.77□□□□□ -0.2
HELLS-210ENST00000466552 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
HELLS-210ENST00000466552 SCAF1Q9H7N4 1312 aaKnown RBP13.69□□□□□ -0.22
HELLS-210ENST00000466552 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
HELLS-210ENST00000466552 MAPK8IP2Q13387 824 aaPredicted RBP13.62□□□□□ -0.23
HELLS-210ENST00000466552 TPRNQ4KMQ1 711 aa13.62□□□□□ -0.23
HELLS-210ENST00000466552 ATXN8OSP0DMR3 200 aa13.59□□□□□ -0.23
HELLS-210ENST00000466552 RNF216Q9NWF9 866 aaPredicted RBP13.53□□□□□ -0.24
HELLS-210ENST00000466552 VSIG10Q8N0Z9 540 aa13.47□□□□□ -0.25
HELLS-210ENST00000466552 TIMELESSQ9UNS1 1208 aa13.47□□□□□ -0.25
HELLS-210ENST00000466552 MYCNP04198 464 aaPredicted RBP13.45□□□□□ -0.26
HELLS-210ENST00000466552 DAXXQ9UER7 740 aaPredicted RBP13.44□□□□□ -0.26
HELLS-210ENST00000466552 KDM2AQ9Y2K7 1162 aa13.41□□□□□ -0.26
HELLS-210ENST00000466552 DCAF8L2P0C7V8 631 aa13.4□□□□□ -0.27
HELLS-210ENST00000466552 FBLN2P98095 1184 aa13.33□□□□□ -0.28
HELLS-210ENST00000466552 TULP1O00294 542 aaPredicted RBP13.33□□□□□ -0.28
HELLS-210ENST00000466552 ATF5Q9Y2D1 282 aaPredicted RBP13.28□□□□□ -0.28
HELLS-210ENST00000466552 ARXQ96QS3 562 aa13.2□□□□□ -0.3
HELLS-210ENST00000466552 HOXD11P31277 338 aaPredicted RBP13.17□□□□□ -0.3
HELLS-210ENST00000466552 PKD2Q13563 968 aa13.17□□□□□ -0.3
HELLS-210ENST00000466552 FBXO3Q9UK99 471 aa13.12□□□□□ -0.31
HELLS-210ENST00000466552 IFNLR1Q8IU57 520 aaPredicted RBP13.11□□□□□ -0.31
HELLS-210ENST00000466552 GTF3C3Q9Y5Q9 886 aa13.1□□□□□ -0.31
HELLS-210ENST00000466552 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
HELLS-210ENST00000466552 PAXIP1Q6ZW49 1069 aaPredicted RBP13.06□□□□□ -0.32
HELLS-210ENST00000466552 NPM1P06748 294 aaKnown RBP eCLIP13.04□□□□□ -0.32
HELLS-210ENST00000466552 CFAP44Q96MT7 982 aa13.03□□□□□ -0.32
HELLS-210ENST00000466552 BBXQ8WY36 941 aaPredicted RBP12.99□□□□□ -0.33
HELLS-210ENST00000466552 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.98□□□□□ -0.33
HELLS-210ENST00000466552 TSHZ2Q9NRE2 1034 aa12.97□□□□□ -0.33
HELLS-210ENST00000466552 DMRT2Q9Y5R5 561 aa12.94□□□□□ -0.34
HELLS-210ENST00000466552 SPDYE4A6NLX3 237 aa12.9□□□□□ -0.34
HELLS-210ENST00000466552 MSH5O43196 834 aa12.88□□□□□ -0.35
HELLS-210ENST00000466552 HOMEZQ8IX15 550 aa12.88□□□□□ -0.35
HELLS-210ENST00000466552 PROM2Q8N271 834 aa12.87□□□□□ -0.35
HELLS-210ENST00000466552 TMEM132AQ24JP5 1023 aa12.84□□□□□ -0.35
HELLS-210ENST00000466552 NBR1Q14596 966 aa12.78□□□□□ -0.36
HELLS-210ENST00000466552 SPRYD3Q8NCJ5 442 aa12.77□□□□□ -0.36
HELLS-210ENST00000466552 ECM2O94769 699 aaPredicted RBP12.75□□□□□ -0.37
HELLS-210ENST00000466552 ERICH6Q7L0X2 663 aa12.73□□□□□ -0.37
HELLS-210ENST00000466552 MKRN4PQ13434 485 aaPredicted RBP12.71□□□□□ -0.38
HELLS-210ENST00000466552 RGL2O15211 777 aa12.7□□□□□ -0.38
HELLS-210ENST00000466552 C14orf37Q86TY3 774 aa12.7□□□□□ -0.38
HELLS-210ENST00000466552 DNAJC5Q9H3Z4 198 aa12.69□□□□□ -0.38
HELLS-210ENST00000466552 ZNF219Q9P2Y4 722 aaPredicted RBP12.69□□□□□ -0.38
HELLS-210ENST00000466552 SAMD1Q6SPF0 538 aaPredicted RBP12.67□□□□□ -0.38
HELLS-210ENST00000466552 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
HELLS-210ENST00000466552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.58□□□□□ -0.4
HELLS-210ENST00000466552 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
HELLS-210ENST00000466552 SPOCK2Q92563 424 aa12.56□□□□□ -0.4
HELLS-210ENST00000466552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.55□□□□□ -0.4
HELLS-210ENST00000466552 CHGAP10645 457 aaKnown RBP12.53□□□□□ -0.4
HELLS-210ENST00000466552 KLHL34Q8N239 644 aa12.52□□□□□ -0.41
HELLS-210ENST00000466552 PODXL2Q9NZ53 605 aa12.49□□□□□ -0.41
HELLS-210ENST00000466552 SUPT5HO00267 1087 aaKnown RBP12.48□□□□□ -0.41
HELLS-210ENST00000466552 DCAF8L1A6NGE4 600 aa12.39□□□□□ -0.43
HELLS-210ENST00000466552 RANGAP1P46060 587 aaPredicted RBP12.34□□□□□ -0.43
HELLS-210ENST00000466552 UBTFP17480 764 aaKnown RBP12.26□□□□□ -0.45
HELLS-210ENST00000466552 HS6ST3Q8IZP7 471 aa12.26□□□□□ -0.45
HELLS-210ENST00000466552 NKX1-1Q15270 411 aaPredicted RBP12.25□□□□□ -0.45
HELLS-210ENST00000466552 BRPF1P55201 1214 aaPredicted RBP12.24□□□□□ -0.45
HELLS-210ENST00000466552 CIZ1Q9ULV3 898 aaPredicted RBP12.23□□□□□ -0.45
HELLS-210ENST00000466552 TRIM26Q12899 539 aaPredicted RBP12.21□□□□□ -0.46
HELLS-210ENST00000466552 PLCD3Q8N3E9 789 aa12.19□□□□□ -0.46
HELLS-210ENST00000466552 TRHP20396 242 aaPredicted RBP12.19□□□□□ -0.46
HELLS-210ENST00000466552 GTPBP6O43824 516 aaPredicted RBP12.18□□□□□ -0.46
HELLS-210ENST00000466552 RNF25Q96BH1 459 aaPredicted RBP12.16□□□□□ -0.46
HELLS-210ENST00000466552 HRCP23327 699 aa12.11□□□□□ -0.47
HELLS-210ENST00000466552 LMOD2Q6P5Q4 547 aa12.11□□□□□ -0.47
HELLS-210ENST00000466552 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.1□□□□□ -0.47
HELLS-210ENST00000466552 POLA2Q14181 598 aa12.1□□□□□ -0.47
HELLS-210ENST00000466552 NPM2Q86SE8 214 aaKnown RBP12.09□□□□□ -0.47
HELLS-210ENST00000466552 MIER1Q8N108 512 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 210.1 ms