RNA–Protein interactions for RNA: ENST00000442034.5

RAB3GAP1-203, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 1 (best) BASIC

Gene RAB3GAP1, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-203ENST00000442034 DKC1O60832 514 aaKnown RBP eCLIP10.04□□□□□ -0.82e-25■■■■■ 27.4
RAB3GAP1-203ENST00000442034 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.98□□□□□ -0.976e-11■■■■■ 36.8
RAB3GAP1-203ENST00000442034 PTBP1P26599 531 aaKnown RBP eCLIP8.74□□□□□ -1.012e-10■■■■■ 49.1
RAB3GAP1-203ENST00000442034 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.74□□□□□ -0.858e-10■■■■□ 19.7
RAB3GAP1-203ENST00000442034 GPKOWQ92917 476 aaPredicted RBP eCLIP10.34□□□□□ -0.752e-9■■■■□ 22.7
RAB3GAP1-203ENST00000442034 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.12□□□□□ -0.954e-9■■■■■ 34.7
RAB3GAP1-203ENST00000442034 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.33□□□□□ -0.926e-9■■■□□ 19.1
RAB3GAP1-203ENST00000442034 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.81□□□□□ -12e-8■■■■□ 26.1
RAB3GAP1-203ENST00000442034 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.98□□□□□ -0.652e-8■■■■■ 39.5
RAB3GAP1-203ENST00000442034 TIAL1Q01085 375 aaKnown RBP eCLIP8.9□□□□□ -0.982e-8■□□□□ 11.1
RAB3GAP1-203ENST00000442034 UPF1Q92900 1129 aaKnown RBP eCLIP9.62□□□□□ -0.875e-8■■■□□ 18.7
RAB3GAP1-203ENST00000442034 HNRNPKP61978 463 aaKnown RBP eCLIP8.44□□□□□ -1.065e-8■□□□□ 10.7
RAB3GAP1-203ENST00000442034 FXR2P51116 673 aaKnown RBP eCLIP10.12□□□□□ -0.796e-8■■■□□ 16.9
RAB3GAP1-203ENST00000442034 TIA1P31483 386 aaKnown RBP eCLIP8.96□□□□□ -0.989e-8■■□□□ 13
RAB3GAP1-203ENST00000442034 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.32□□□□□ -1.081e-7■■■■■ 28.9
RAB3GAP1-203ENST00000442034 ILF3Q12906 894 aaKnown RBP eCLIP8.72□□□□□ -1.011e-7■■□□□ 14.1
RAB3GAP1-203ENST00000442034 EIF3DO15371 548 aaKnown RBP eCLIP10□□□□□ -0.811e-7■□□□□ 8.6
RAB3GAP1-203ENST00000442034 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.45□□□□□ -0.92e-7■■■■■ 62.8
RAB3GAP1-203ENST00000442034 AQRO60306 1485 aaKnown RBP eCLIP12.33□□□□□ -0.443e-7■■■■■ 39.6
RAB3GAP1-203ENST00000442034 PCBP2Q15366 365 aaKnown RBP eCLIP9.08□□□□□ -0.964e-7■■■■■ 36.3
RAB3GAP1-203ENST00000442034 HNRNPLP14866 589 aaKnown RBP eCLIP9.4□□□□□ -0.94e-7■■■□□ 18.9
RAB3GAP1-203ENST00000442034 SND1Q7KZF4 910 aaKnown RBP eCLIP10.36□□□□□ -0.755e-7■□□□□ 10.8
RAB3GAP1-203ENST00000442034 U2AF2P26368 475 aaKnown RBP eCLIP10.74□□□□□ -0.695e-7■■■■□ 20.2
RAB3GAP1-203ENST00000442034 KHSRPQ92945 711 aaKnown RBP eCLIP9.26□□□□□ -0.935e-7■■□□□ 13
RAB3GAP1-203ENST00000442034 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.64□□□□□ -0.716e-7■■■□□ 15.4
RAB3GAP1-203ENST00000442034 RBM15Q96T37 977 aaKnown RBP eCLIP9.89□□□□□ -0.837e-7■■□□□ 13
RAB3GAP1-203ENST00000442034 QKIQ96PU8 341 aaKnown RBP eCLIP9.49□□□□□ -0.897e-7■■■■■ 26.8
RAB3GAP1-203ENST00000442034 ZNF622Q969S3 477 aaKnown RBP eCLIP10.13□□□□□ -0.797e-7■■□□□ 12.3
RAB3GAP1-203ENST00000442034 G3BP1Q13283 466 aaKnown RBP eCLIP11.18□□□□□ -0.628e-7■□□□□ 8.4
RAB3GAP1-203ENST00000442034 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.5□□□□□ -1.211e-6■■■■□ 23.8
RAB3GAP1-203ENST00000442034 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.81□□□□□ -11e-6■■■■□ 19.6
RAB3GAP1-203ENST00000442034 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.62□□□□□ -0.711e-6■■□□□ 12.6
RAB3GAP1-203ENST00000442034 SUB1P53999 127 aaKnown RBP eCLIP7.89□□□□□ -1.151e-6■■□□□ 12.7
RAB3GAP1-203ENST00000442034 PPIGQ13427 754 aaKnown RBP eCLIP8.98□□□□□ -0.971e-6■■□□□ 14
RAB3GAP1-203ENST00000442034 HNRNPMP52272 730 aaKnown RBP eCLIP12.13□□□□□ -0.471e-6■■■■□ 20.9
RAB3GAP1-203ENST00000442034 HNRNPCP07910 306 aaKnown RBP eCLIP9.49□□□□□ -0.891e-6■■□□□ 12.5
RAB3GAP1-203ENST00000442034 MATR3P43243 847 aaKnown RBP eCLIP10.46□□□□□ -0.742e-6■■■■□ 23.9
RAB3GAP1-203ENST00000442034 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.05□□□□□ -0.82e-6■■■■■ 154
RAB3GAP1-203ENST00000442034 EFTUD2Q15029 972 aaKnown RBP eCLIP9.62□□□□□ -0.872e-6■□□□□ 10.2
RAB3GAP1-203ENST00000442034 TARDBPQ13148 414 aaKnown RBP eCLIP8.97□□□□□ -0.972e-6■■□□□ 12.4
RAB3GAP1-203ENST00000442034 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.68□□□□□ -1.022e-6■□□□□ 9.4
RAB3GAP1-203ENST00000442034 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.11□□□□□ -0.792e-6■■■□□ 15
RAB3GAP1-203ENST00000442034 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.6□□□□□ -0.872e-6■■□□□ 11.7
RAB3GAP1-203ENST00000442034 CSTF2P33240 577 aaKnown RBP eCLIP8.94□□□□□ -0.983e-6■■■□□ 17.8
RAB3GAP1-203ENST00000442034 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10□□□□□ -0.813e-6■□□□□ 9.5
RAB3GAP1-203ENST00000442034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.36□□□□□ -0.433e-6■□□□□ 8.6
RAB3GAP1-203ENST00000442034 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.56□□□□□ -1.044e-6■■■□□ 15.4
RAB3GAP1-203ENST00000442034 IGF2BP3O00425 579 aaKnown RBP eCLIP9.88□□□□□ -0.834e-6■■■■□ 19.3
RAB3GAP1-203ENST00000442034 SF3B1O75533 1304 aaKnown RBP eCLIP9.37□□□□□ -0.914e-6■■■■■ 67.2
RAB3GAP1-203ENST00000442034 SF3B4Q15427 424 aaKnown RBP eCLIP8.83□□□□□ -14e-6■■■■□ 21.5
RAB3GAP1-203ENST00000442034 SF3A3Q12874 501 aaKnown RBP eCLIP10.09□□□□□ -0.794e-6■■■■□ 22.2
RAB3GAP1-203ENST00000442034 TRA2AQ13595 282 aaKnown RBP eCLIP8.08□□□□□ -1.125e-6■■■□□ 14.9
Retrieved 52 of 52 RNA–protein pairs in 12.7 ms