RNA–Protein interactions for RNA: ENST00000409751.1

RAB1A-202, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB1A, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-202ENST00000409751 UPF1Q92900 1129 aaKnown RBP eCLIP28.42■■■□□ 2.142e-32■■■■□ 19.8
RAB1A-202ENST00000409751 DDX3XO00571 662 aaKnown RBP eCLIP22.33■■□□□ 1.172e-21■■□□□ 12.4
RAB1A-202ENST00000409751 NCBP2P52298 156 aaKnown RBP eCLIP19.91■□□□□ 0.787e-18■■□□□ 12.1
RAB1A-202ENST00000409751 RPS3P23396 243 aaKnown RBP eCLIP20.95■□□□□ 0.943e-15■■□□□ 12.5
RAB1A-202ENST00000409751 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.58■■□□□ 1.363e-15■■■■■ 45.6
RAB1A-202ENST00000409751 DDX6P26196 483 aaKnown RBP eCLIP22.48■■□□□ 1.194e-15■□□□□ 9.1
RAB1A-202ENST00000409751 PCBP2Q15366 365 aaKnown RBP eCLIP20.43■□□□□ 0.861e-13■■■■□ 25.9
RAB1A-202ENST00000409751 TIAL1Q01085 375 aaKnown RBP eCLIP20.79■□□□□ 0.922e-11■■■■■ 40
RAB1A-202ENST00000409751 RBM22Q9NW64 420 aaKnown RBP eCLIP21.66■■□□□ 1.061e-10■■■■□ 26.3
RAB1A-202ENST00000409751 ZC3H11AO75152 810 aaKnown RBP eCLIP23.3■■□□□ 1.324e-10■■■□□ 16.3
RAB1A-202ENST00000409751 FUSP35637 526 aaKnown RBP eCLIP14.13□□□□□ -0.156e-10■■■■■ 31.5
RAB1A-202ENST00000409751 PRPF4O43172 522 aaKnown RBP eCLIP20.31■□□□□ 0.849e-10■■■■■ 29.6
RAB1A-202ENST00000409751 EFTUD2Q15029 972 aaKnown RBP eCLIP20.89■□□□□ 0.931e-9■■□□□ 11.5
RAB1A-202ENST00000409751 SUB1P53999 127 aaKnown RBP eCLIP16.51■□□□□ 0.232e-9■■■□□ 15.2
RAB1A-202ENST00000409751 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.55■■□□□ 1.23e-9■■□□□ 13.6
RAB1A-202ENST00000409751 GTF2F1P35269 517 aaKnown RBP eCLIP22.97■■□□□ 1.278e-9■■■■■ 35.3
RAB1A-202ENST00000409751 FUBP3Q96I24 572 aaKnown RBP eCLIP22.71■■□□□ 1.231e-8■■□□□ 13.2
RAB1A-202ENST00000409751 PABPC4Q13310 644 aaKnown RBP eCLIP25.16■■□□□ 1.623e-8■■□□□ 11.9
RAB1A-202ENST00000409751 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.82■□□□□ 0.763e-8■■■□□ 16.7
RAB1A-202ENST00000409751 HNRNPLP14866 589 aaKnown RBP eCLIP21.89■■□□□ 1.15e-8■■■□□ 15.6
RAB1A-202ENST00000409751 EWSR1Q01844 656 aaKnown RBP eCLIP16.18■□□□□ 0.181e-7■■■■□ 20.5
RAB1A-202ENST00000409751 MATR3P43243 847 aaKnown RBP eCLIP23.47■■□□□ 1.351e-7■□□□□ 9.4
RAB1A-202ENST00000409751 AQRO60306 1485 aaKnown RBP eCLIP36.42■■■■□ 3.421e-7■■■□□ 16.7
RAB1A-202ENST00000409751 TIA1P31483 386 aaKnown RBP eCLIP20.09■□□□□ 0.811e-7■■■■□ 19.4
RAB1A-202ENST00000409751 QKIQ96PU8 341 aaKnown RBP eCLIP21.64■■□□□ 1.052e-7■■□□□ 13.9
RAB1A-202ENST00000409751 PTBP1P26599 531 aaKnown RBP eCLIP17.04■□□□□ 0.322e-7■■■■□ 19.8
RAB1A-202ENST00000409751 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.31■■□□□ 12e-7■■■■■ 27.2
RAB1A-202ENST00000409751 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.77■□□□□ 0.433e-7■■■■□ 19.3
RAB1A-202ENST00000409751 SF3B1O75533 1304 aaKnown RBP eCLIP23.1■■□□□ 1.293e-7■■■■■ 75
RAB1A-202ENST00000409751 HNRNPMP52272 730 aaKnown RBP eCLIP33■■■□□ 2.874e-7■■■□□ 18.1
RAB1A-202ENST00000409751 SFPQP23246 707 aaKnown RBP eCLIP23.63■■□□□ 1.374e-7■□□□□ 11
RAB1A-202ENST00000409751 ILF3Q12906 894 aaKnown RBP eCLIP21.11■□□□□ 0.974e-7■■■■□ 26.2
RAB1A-202ENST00000409751 KHSRPQ92945 711 aaKnown RBP eCLIP22.31■■□□□ 1.165e-7■■□□□ 14.5
RAB1A-202ENST00000409751 SND1Q7KZF4 910 aaKnown RBP eCLIP22.23■■□□□ 1.156e-7■□□□□ 9.7
RAB1A-202ENST00000409751 U2AF2P26368 475 aaKnown RBP eCLIP24.21■■□□□ 1.478e-7■■■■□ 19.5
RAB1A-202ENST00000409751 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.8■■□□□ 1.089e-7■■□□□ 12.9
RAB1A-202ENST00000409751 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.35■□□□□ 0.379e-7■■□□□ 12.4
RAB1A-202ENST00000409751 AKAP1Q92667 903 aaKnown RBP eCLIP18.56■□□□□ 0.561e-6■■□□□ 13
RAB1A-202ENST00000409751 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.3■■□□□ 1.161e-6■■■■■ 26.8
RAB1A-202ENST00000409751 HNRNPCP07910 306 aaKnown RBP eCLIP16.14■□□□□ 0.173e-6■■□□□ 12.2
RAB1A-202ENST00000409751 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.51■■□□□ 1.514e-6■□□□□ 10.6
Retrieved 41 of 41 RNA–protein pairs in 9.5 ms