RNA–Protein interactions for RNA: ENST00000392393.7

VNN3-203, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-203ENST00000392393 CHIC1Q5VXU3 224 aa19.7■□□□□ 0.74
VNN3-203ENST00000392393 AEBP2Q6ZN18 517 aaPredicted RBP19.04■□□□□ 0.64
VNN3-203ENST00000392393 PHF23Q9BUL5 403 aaPredicted RBP17.61■□□□□ 0.41
VNN3-203ENST00000392393 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
VNN3-203ENST00000392393 PLPPR3Q6T4P5 718 aa16.48■□□□□ 0.23
VNN3-203ENST00000392393 KCNA4P22459 653 aa15.99■□□□□ 0.15
VNN3-203ENST00000392393 SLC24A1O60721 1099 aa15.83■□□□□ 0.13
VNN3-203ENST00000392393 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
VNN3-203ENST00000392393 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
VNN3-203ENST00000392393 ADRA2BP18089 450 aa15.63■□□□□ 0.09
VNN3-203ENST00000392393 SLC4A1APQ9BWU0 796 aaKnown RBP15.35■□□□□ 0.05
VNN3-203ENST00000392393 RTN4Q9NQC3 1192 aaKnown RBP15.21■□□□□ 0.02
VNN3-203ENST00000392393 PPP6R1Q9UPN7 881 aa15.14■□□□□ 0.01
VNN3-203ENST00000392393 AMER1Q5JTC6 1135 aaPredicted RBP14.99□□□□□ -0.01
VNN3-203ENST00000392393 ZBTB22O15209 634 aa14.82□□□□□ -0.04
VNN3-203ENST00000392393 PPP4R3CPQ6ZMV5 832 aa14.77□□□□□ -0.04
VNN3-203ENST00000392393 NCBP3Q53F19 620 aaKnown RBP14.59□□□□□ -0.07
VNN3-203ENST00000392393 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
VNN3-203ENST00000392393 FOXD1Q16676 465 aa14.59□□□□□ -0.07
VNN3-203ENST00000392393 FOXD4L1Q9NU39 408 aa14.22□□□□□ -0.13
VNN3-203ENST00000392393 FKBP8Q14318 412 aa14.08□□□□□ -0.16
VNN3-203ENST00000392393 PRKCSHP14314 528 aaPredicted RBP14□□□□□ -0.17
VNN3-203ENST00000392393 PIAS4Q8N2W9 510 aaPredicted RBP14□□□□□ -0.17
VNN3-203ENST00000392393 CNKSR2Q8WXI2 1034 aa14□□□□□ -0.17
VNN3-203ENST00000392393 DNAJC5BQ9UF47 199 aa13.83□□□□□ -0.2
VNN3-203ENST00000392393 PLCB2Q00722 1185 aa13.82□□□□□ -0.2
VNN3-203ENST00000392393 TAOK2Q9UL54 1235 aa13.74□□□□□ -0.21
VNN3-203ENST00000392393 BCANQ96GW7 911 aa13.71□□□□□ -0.22
VNN3-203ENST00000392393 HAP1P54257 671 aaPredicted RBP13.64□□□□□ -0.23
VNN3-203ENST00000392393 SCAF1Q9H7N4 1312 aaKnown RBP13.57□□□□□ -0.24
VNN3-203ENST00000392393 SLC4A2P04920 1241 aa13.52□□□□□ -0.25
VNN3-203ENST00000392393 ATXN8OSP0DMR3 200 aa13.52□□□□□ -0.25
VNN3-203ENST00000392393 TPRNQ4KMQ1 711 aa13.52□□□□□ -0.25
VNN3-203ENST00000392393 DAXXQ9UER7 740 aaPredicted RBP13.42□□□□□ -0.26
VNN3-203ENST00000392393 MAPK8IP2Q13387 824 aaPredicted RBP13.41□□□□□ -0.26
VNN3-203ENST00000392393 VSIG10Q8N0Z9 540 aa13.41□□□□□ -0.26
VNN3-203ENST00000392393 RNF216Q9NWF9 866 aaPredicted RBP13.41□□□□□ -0.26
VNN3-203ENST00000392393 TIMELESSQ9UNS1 1208 aa13.37□□□□□ -0.27
VNN3-203ENST00000392393 MYCNP04198 464 aaPredicted RBP13.33□□□□□ -0.28
VNN3-203ENST00000392393 KDM2AQ9Y2K7 1162 aa13.28□□□□□ -0.28
VNN3-203ENST00000392393 DCAF8L2P0C7V8 631 aa13.24□□□□□ -0.29
VNN3-203ENST00000392393 TULP1O00294 542 aaPredicted RBP13.23□□□□□ -0.29
VNN3-203ENST00000392393 FBLN2P98095 1184 aa13.19□□□□□ -0.3
VNN3-203ENST00000392393 ARXQ96QS3 562 aa13.18□□□□□ -0.3
VNN3-203ENST00000392393 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
VNN3-203ENST00000392393 HOXD11P31277 338 aaPredicted RBP13.06□□□□□ -0.32
VNN3-203ENST00000392393 PKD2Q13563 968 aa13.04□□□□□ -0.32
VNN3-203ENST00000392393 FBXO3Q9UK99 471 aa13.03□□□□□ -0.32
VNN3-203ENST00000392393 GTF3C3Q9Y5Q9 886 aa13.02□□□□□ -0.32
VNN3-203ENST00000392393 VASPP50552 380 aaPredicted RBP12.97□□□□□ -0.33
VNN3-203ENST00000392393 IFNLR1Q8IU57 520 aaPredicted RBP12.97□□□□□ -0.33
VNN3-203ENST00000392393 PAXIP1Q6ZW49 1069 aaPredicted RBP12.95□□□□□ -0.34
VNN3-203ENST00000392393 NPM1P06748 294 aaKnown RBP eCLIP12.91□□□□□ -0.34
VNN3-203ENST00000392393 BBXQ8WY36 941 aaPredicted RBP12.91□□□□□ -0.34
VNN3-203ENST00000392393 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.9□□□□□ -0.34
VNN3-203ENST00000392393 CFAP44Q96MT7 982 aa12.89□□□□□ -0.35
VNN3-203ENST00000392393 HOMEZQ8IX15 550 aa12.84□□□□□ -0.35
VNN3-203ENST00000392393 TSHZ2Q9NRE2 1034 aa12.84□□□□□ -0.35
VNN3-203ENST00000392393 DMRT2Q9Y5R5 561 aa12.8□□□□□ -0.36
VNN3-203ENST00000392393 PROM2Q8N271 834 aa12.8□□□□□ -0.36
VNN3-203ENST00000392393 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.36
VNN3-203ENST00000392393 TMEM132AQ24JP5 1023 aa12.77□□□□□ -0.36
VNN3-203ENST00000392393 ERICH6Q7L0X2 663 aa12.75□□□□□ -0.37
VNN3-203ENST00000392393 MSH5O43196 834 aa12.73□□□□□ -0.37
VNN3-203ENST00000392393 NBR1Q14596 966 aa12.69□□□□□ -0.38
VNN3-203ENST00000392393 SPRYD3Q8NCJ5 442 aa12.67□□□□□ -0.38
VNN3-203ENST00000392393 DNAJC5Q9H3Z4 198 aa12.65□□□□□ -0.38
VNN3-203ENST00000392393 ECM2O94769 699 aaPredicted RBP12.63□□□□□ -0.39
VNN3-203ENST00000392393 C14orf37Q86TY3 774 aa12.62□□□□□ -0.39
VNN3-203ENST00000392393 RGL2O15211 777 aa12.57□□□□□ -0.4
VNN3-203ENST00000392393 MKRN4PQ13434 485 aaPredicted RBP12.57□□□□□ -0.4
VNN3-203ENST00000392393 SAMD1Q6SPF0 538 aaPredicted RBP12.56□□□□□ -0.4
VNN3-203ENST00000392393 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
VNN3-203ENST00000392393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.48□□□□□ -0.41
VNN3-203ENST00000392393 HNRNPUL2Q1KMD3 747 aaKnown RBP12.48□□□□□ -0.41
VNN3-203ENST00000392393 SPOCK2Q92563 424 aa12.47□□□□□ -0.41
VNN3-203ENST00000392393 U3KPZ7 1027 aaPredicted RBP12.46□□□□□ -0.41
VNN3-203ENST00000392393 PODXL2Q9NZ53 605 aa12.42□□□□□ -0.42
VNN3-203ENST00000392393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.4□□□□□ -0.42
VNN3-203ENST00000392393 CHGAP10645 457 aaKnown RBP12.39□□□□□ -0.43
VNN3-203ENST00000392393 KLHL34Q8N239 644 aa12.38□□□□□ -0.43
VNN3-203ENST00000392393 SUPT5HO00267 1087 aaKnown RBP12.37□□□□□ -0.43
VNN3-203ENST00000392393 RANGAP1P46060 587 aaPredicted RBP12.32□□□□□ -0.44
VNN3-203ENST00000392393 DCAF8L1A6NGE4 600 aa12.18□□□□□ -0.46
VNN3-203ENST00000392393 HS6ST3Q8IZP7 471 aa12.18□□□□□ -0.46
VNN3-203ENST00000392393 UBTFP17480 764 aaKnown RBP12.15□□□□□ -0.46
VNN3-203ENST00000392393 BRPF1P55201 1214 aaPredicted RBP12.15□□□□□ -0.46
VNN3-203ENST00000392393 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
VNN3-203ENST00000392393 TRIM26Q12899 539 aaPredicted RBP12.11□□□□□ -0.47
VNN3-203ENST00000392393 CIZ1Q9ULV3 898 aaPredicted RBP12.08□□□□□ -0.48
VNN3-203ENST00000392393 GTPBP6O43824 516 aaPredicted RBP12.08□□□□□ -0.48
VNN3-203ENST00000392393 PLCD3Q8N3E9 789 aa12.06□□□□□ -0.48
VNN3-203ENST00000392393 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
VNN3-203ENST00000392393 POTEDQ86YR6 584 aa12.04□□□□□ -0.48
VNN3-203ENST00000392393 NPM2Q86SE8 214 aaKnown RBP12.03□□□□□ -0.48
VNN3-203ENST00000392393 HRCP23327 699 aa12.02□□□□□ -0.49
VNN3-203ENST00000392393 LMOD2Q6P5Q4 547 aa12.02□□□□□ -0.49
VNN3-203ENST00000392393 RNF25Q96BH1 459 aaPredicted RBP12.02□□□□□ -0.49
VNN3-203ENST00000392393 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.01□□□□□ -0.49
VNN3-203ENST00000392393 APLP2Q06481 763 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms