RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 POTEDQ86YR6 584 aa6.96□□□□□ -1.3
SNORA48.1-201ENST00000390879 AEBP2Q6ZN18 517 aaPredicted RBP6.81□□□□□ -1.32
SNORA48.1-201ENST00000390879 CHIC1Q5VXU3 224 aa6.7□□□□□ -1.34
SNORA48.1-201ENST00000390879 PHF23Q9BUL5 403 aaPredicted RBP5.95□□□□□ -1.46
SNORA48.1-201ENST00000390879 SENP3Q9H4L4 574 aaPredicted RBP5.72□□□□□ -1.49
SNORA48.1-201ENST00000390879 FOXD1Q16676 465 aa5.59□□□□□ -1.51
SNORA48.1-201ENST00000390879 PLPPR3Q6T4P5 718 aa5.56□□□□□ -1.52
SNORA48.1-201ENST00000390879 MSH5O43196 834 aa5.4□□□□□ -1.54
SNORA48.1-201ENST00000390879 ADRA2BP18089 450 aa5.26□□□□□ -1.57
SNORA48.1-201ENST00000390879 CACNB1Q02641 598 aaPredicted RBP5.23□□□□□ -1.57
SNORA48.1-201ENST00000390879 EHMT2Q96KQ7 1210 aa5.23□□□□□ -1.57
SNORA48.1-201ENST00000390879 POTEHQ6S545 545 aa5.22□□□□□ -1.57
SNORA48.1-201ENST00000390879 KCNA4P22459 653 aa5.19□□□□□ -1.58
SNORA48.1-201ENST00000390879 PPP6R1Q9UPN7 881 aa5.17□□□□□ -1.58
SNORA48.1-201ENST00000390879 SLC4A1APQ9BWU0 796 aaKnown RBP4.99□□□□□ -1.61
SNORA48.1-201ENST00000390879 PPP4R3CPQ6ZMV5 832 aa4.96□□□□□ -1.62
SNORA48.1-201ENST00000390879 CSRNP3Q8WYN3 585 aa4.96□□□□□ -1.62
SNORA48.1-201ENST00000390879 PIAS4Q8N2W9 510 aaPredicted RBP4.93□□□□□ -1.62
SNORA48.1-201ENST00000390879 NCBP3Q53F19 620 aaKnown RBP4.89□□□□□ -1.63
SNORA48.1-201ENST00000390879 NPM3O75607 178 aaKnown RBP4.85□□□□□ -1.63
SNORA48.1-201ENST00000390879 ZBTB22O15209 634 aa4.79□□□□□ -1.64
SNORA48.1-201ENST00000390879 CNKSR2Q8WXI2 1034 aa4.74□□□□□ -1.65
SNORA48.1-201ENST00000390879 SCAF1Q9H7N4 1312 aaKnown RBP4.7□□□□□ -1.66
SNORA48.1-201ENST00000390879 PLSCR2Q9NRY7 297 aa4.67□□□□□ -1.66
SNORA48.1-201ENST00000390879 FOXD4L1Q9NU39 408 aa4.66□□□□□ -1.66
SNORA48.1-201ENST00000390879 MAPK8IP2Q13387 824 aaPredicted RBP4.64□□□□□ -1.67
SNORA48.1-201ENST00000390879 RNF39Q9H2S5 420 aa4.63□□□□□ -1.67
SNORA48.1-201ENST00000390879 SLC24A1O60721 1099 aa4.61□□□□□ -1.67
SNORA48.1-201ENST00000390879 RTN4Q9NQC3 1192 aaKnown RBP4.61□□□□□ -1.67
SNORA48.1-201ENST00000390879 AMER1Q5JTC6 1135 aaPredicted RBP4.56□□□□□ -1.68
SNORA48.1-201ENST00000390879 RNF216Q9NWF9 866 aaPredicted RBP4.56□□□□□ -1.68
SNORA48.1-201ENST00000390879 DNAJC5BQ9UF47 199 aa4.55□□□□□ -1.68
SNORA48.1-201ENST00000390879 SLC4A2P04920 1241 aa4.5□□□□□ -1.69
SNORA48.1-201ENST00000390879 FKBP8Q14318 412 aa4.5□□□□□ -1.69
SNORA48.1-201ENST00000390879 MYCNP04198 464 aaPredicted RBP4.46□□□□□ -1.7
SNORA48.1-201ENST00000390879 HOXD11P31277 338 aaPredicted RBP4.46□□□□□ -1.7
SNORA48.1-201ENST00000390879 DMRT2Q9Y5R5 561 aa4.46□□□□□ -1.7
SNORA48.1-201ENST00000390879 SP7Q8TDD2 431 aaPredicted RBP4.45□□□□□ -1.7
SNORA48.1-201ENST00000390879 ATXN8OSP0DMR3 200 aa4.43□□□□□ -1.7
SNORA48.1-201ENST00000390879 C1QBPQ07021 282 aaKnown RBP4.41□□□□□ -1.7
SNORA48.1-201ENST00000390879 ATF5Q9Y2D1 282 aaPredicted RBP4.36□□□□□ -1.71
SNORA48.1-201ENST00000390879 DCAF8L1A6NGE4 600 aa4.34□□□□□ -1.71
SNORA48.1-201ENST00000390879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.31□□□□□ -1.72
SNORA48.1-201ENST00000390879 SAMD1Q6SPF0 538 aaPredicted RBP4.27□□□□□ -1.73
SNORA48.1-201ENST00000390879 U3KPZ7 1027 aaPredicted RBP4.26□□□□□ -1.73
SNORA48.1-201ENST00000390879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.25□□□□□ -1.73
SNORA48.1-201ENST00000390879 HNRNPUL2Q1KMD3 747 aaKnown RBP4.25□□□□□ -1.73
SNORA48.1-201ENST00000390879 ZNF219Q9P2Y4 722 aaPredicted RBP4.23□□□□□ -1.73
SNORA48.1-201ENST00000390879 DCAF8L2P0C7V8 631 aa4.22□□□□□ -1.73
SNORA48.1-201ENST00000390879 SPDYE4A6NLX3 237 aa4.21□□□□□ -1.74
SNORA48.1-201ENST00000390879 PLCB2Q00722 1185 aa4.21□□□□□ -1.74
SNORA48.1-201ENST00000390879 FBXO3Q9UK99 471 aa4.21□□□□□ -1.74
SNORA48.1-201ENST00000390879 HAP1P54257 671 aaPredicted RBP4.2□□□□□ -1.74
SNORA48.1-201ENST00000390879 VASPP50552 380 aaPredicted RBP4.18□□□□□ -1.74
SNORA48.1-201ENST00000390879 MKRN4PQ13434 485 aaPredicted RBP4.16□□□□□ -1.74
SNORA48.1-201ENST00000390879 LHX8Q68G74 356 aa4.16□□□□□ -1.74
SNORA48.1-201ENST00000390879 PRKCSHP14314 528 aaPredicted RBP4.14□□□□□ -1.75
SNORA48.1-201ENST00000390879 APLP2Q06481 763 aa4.14□□□□□ -1.75
SNORA48.1-201ENST00000390879 IFNLR1Q8IU57 520 aaPredicted RBP4.14□□□□□ -1.75
SNORA48.1-201ENST00000390879 FBLN2P98095 1184 aa4.13□□□□□ -1.75
SNORA48.1-201ENST00000390879 PROM2Q8N271 834 aa4.12□□□□□ -1.75
SNORA48.1-201ENST00000390879 BCANQ96GW7 911 aa4.12□□□□□ -1.75
SNORA48.1-201ENST00000390879 TRHP20396 242 aaPredicted RBP4.11□□□□□ -1.75
SNORA48.1-201ENST00000390879 PKD2Q13563 968 aa4.11□□□□□ -1.75
SNORA48.1-201ENST00000390879 CHRDL2Q6WN34 429 aa4.11□□□□□ -1.75
SNORA48.1-201ENST00000390879 POLA2Q14181 598 aa4.09□□□□□ -1.75
SNORA48.1-201ENST00000390879 SPINK5Q9NQ38 1064 aaPredicted RBP4.08□□□□□ -1.76
SNORA48.1-201ENST00000390879 TAOK2Q9UL54 1235 aa4.08□□□□□ -1.76
SNORA48.1-201ENST00000390879 VSIG10Q8N0Z9 540 aa4.07□□□□□ -1.76
SNORA48.1-201ENST00000390879 KLHL34Q8N239 644 aa4.07□□□□□ -1.76
SNORA48.1-201ENST00000390879 ECM2O94769 699 aaPredicted RBP4.06□□□□□ -1.76
SNORA48.1-201ENST00000390879 PAXIP1Q6ZW49 1069 aaPredicted RBP4.06□□□□□ -1.76
SNORA48.1-201ENST00000390879 CFAP44Q96MT7 982 aa4.06□□□□□ -1.76
SNORA48.1-201ENST00000390879 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.06□□□□□ -1.76
SNORA48.1-201ENST00000390879 CAPN15O75808 1086 aa4.05□□□□□ -1.76
SNORA48.1-201ENST00000390879 EVX2Q03828 476 aa4.05□□□□□ -1.76
SNORA48.1-201ENST00000390879 TPRNQ4KMQ1 711 aa4.05□□□□□ -1.76
SNORA48.1-201ENST00000390879 KDM2AQ9Y2K7 1162 aa4.05□□□□□ -1.76
SNORA48.1-201ENST00000390879 NPM1P06748 294 aaKnown RBP eCLIP4.04□□□□□ -1.76
SNORA48.1-201ENST00000390879 DSG3P32926 999 aa4.04□□□□□ -1.76
SNORA48.1-201ENST00000390879 SPOCK2Q92563 424 aa4.04□□□□□ -1.76
SNORA48.1-201ENST00000390879 ABCB7O75027 752 aa4.03□□□□□ -1.76
SNORA48.1-201ENST00000390879 BBXQ8WY36 941 aaPredicted RBP4.03□□□□□ -1.76
SNORA48.1-201ENST00000390879 RGL2O15211 777 aa4.01□□□□□ -1.77
SNORA48.1-201ENST00000390879 PLCD3Q8N3E9 789 aa4.01□□□□□ -1.77
SNORA48.1-201ENST00000390879 POTEMA6NI47 508 aa3.99□□□□□ -1.77
SNORA48.1-201ENST00000390879 TSHZ2Q9NRE2 1034 aa3.99□□□□□ -1.77
SNORA48.1-201ENST00000390879 ZBTB12Q9Y330 459 aaPredicted RBP3.99□□□□□ -1.77
SNORA48.1-201ENST00000390879 SPRYD3Q8NCJ5 442 aa3.98□□□□□ -1.77
SNORA48.1-201ENST00000390879 CHGAP10645 457 aaKnown RBP3.97□□□□□ -1.77
SNORA48.1-201ENST00000390879 MIER1Q8N108 512 aa3.97□□□□□ -1.77
SNORA48.1-201ENST00000390879 ZNF692Q9BU19 519 aaPredicted RBP3.97□□□□□ -1.77
SNORA48.1-201ENST00000390879 CIZ1Q9ULV3 898 aaPredicted RBP3.97□□□□□ -1.77
SNORA48.1-201ENST00000390879 HAX1O00165 279 aa3.96□□□□□ -1.78
SNORA48.1-201ENST00000390879 STAG3Q9UJ98 1225 aa3.96□□□□□ -1.78
SNORA48.1-201ENST00000390879 OSCARQ8IYS5 282 aa3.95□□□□□ -1.78
SNORA48.1-201ENST00000390879 POTEGQ6S5H5 508 aa3.94□□□□□ -1.78
SNORA48.1-201ENST00000390879 PABPN1Q86U42 306 aaKnown RBP eCLIP3.94□□□□□ -1.78
SNORA48.1-201ENST00000390879 NBR1Q14596 966 aa3.93□□□□□ -1.78
SNORA48.1-201ENST00000390879 SPDYE2BA6NHP3 402 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms