RNA–Protein interactions for RNA: ENST00000378567.7

PRKCZ-201, Transcript of protein kinase C zeta, humanhuman

APPRIS P1 TSL 1 (best)

Gene PRKCZ, Length 2,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCZ-201ENST00000378567 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.38■■□□□ 1.495e-8■■■■■ 188.3
PRKCZ-201ENST00000378567 SF3B1O75533 1304 aaKnown RBP eCLIP23.19■■□□□ 1.32e-6■■■■■ 160.8
PRKCZ-201ENST00000378567 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.05■■□□□ 1.445e-7■■■■■ 64.7
PRKCZ-201ENST00000378567 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.28■■□□□ 1.162e-7■■■■■ 53.1
PRKCZ-201ENST00000378567 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.53■□□□□ 0.721e-7■■■■■ 51.6
PRKCZ-201ENST00000378567 PCBP2Q15366 365 aaKnown RBP eCLIP22.17■■□□□ 1.145e-7■■■■■ 48.6
PRKCZ-201ENST00000378567 DDX6P26196 483 aaKnown RBP eCLIP22.14■■□□□ 1.145e-6■■■■■ 46.6
PRKCZ-201ENST00000378567 RBFOX2O43251 390 aaKnown RBP eCLIP18.52■□□□□ 0.564e-7■■■■■ 43.3
PRKCZ-201ENST00000378567 BCCIPQ9P287 314 aaKnown RBP eCLIP23.82■■□□□ 1.41e-6■■■■■ 35.1
PRKCZ-201ENST00000378567 RBM22Q9NW64 420 aaKnown RBP eCLIP22.89■■□□□ 1.251e-6■■■■■ 34.8
PRKCZ-201ENST00000378567 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.57■■□□□ 1.047e-7■■■■■ 34.5
PRKCZ-201ENST00000378567 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.99■■□□□ 1.439e-7■■■■■ 30.4
PRKCZ-201ENST00000378567 HNRNPMP52272 730 aaKnown RBP eCLIP31.94■■■□□ 2.77e-7■■■■■ 29.3
PRKCZ-201ENST00000378567 TROVE2P10155 538 aaKnown RBP eCLIP23.02■■□□□ 1.283e-6■■■■■ 28.8
PRKCZ-201ENST00000378567 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.86■■□□□ 1.253e-6■■■■■ 28.7
PRKCZ-201ENST00000378567 RBM5P52756 815 aaKnown RBP eCLIP25.45■■□□□ 1.668e-8■■■■■ 27.9
PRKCZ-201ENST00000378567 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.11■□□□□ 0.977e-7■■■■■ 27.8
PRKCZ-201ENST00000378567 EIF3DO15371 548 aaKnown RBP eCLIP24.72■■□□□ 1.557e-8■■■■■ 27.6
PRKCZ-201ENST00000378567 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.15■■□□□ 1.464e-6■■■■□ 26
PRKCZ-201ENST00000378567 EFTUD2Q15029 972 aaKnown RBP eCLIP23.39■■□□□ 1.346e-7■■■■□ 24.7
PRKCZ-201ENST00000378567 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.19■■□□□ 1.622e-6■■■■□ 23.4
PRKCZ-201ENST00000378567 AQRO60306 1485 aaKnown RBP eCLIP33.73■■■□□ 2.995e-7■■■■□ 23.1
PRKCZ-201ENST00000378567 HNRNPKP61978 463 aaKnown RBP eCLIP20.78■□□□□ 0.921e-7■■■■□ 22.9
PRKCZ-201ENST00000378567 NCBP2P52298 156 aaKnown RBP eCLIP21.29■■□□□ 13e-6■■■■□ 21.7
PRKCZ-201ENST00000378567 MATR3P43243 847 aaKnown RBP eCLIP24.44■■□□□ 1.53e-6■■■■□ 21.1
PRKCZ-201ENST00000378567 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.62■■□□□ 1.534e-6■■■■□ 21
PRKCZ-201ENST00000378567 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.19■■□□□ 1.31e-6■■■■□ 19.7
PRKCZ-201ENST00000378567 SF3B4Q15427 424 aaKnown RBP eCLIP20.04■□□□□ 0.82e-6■■■■□ 19.7
PRKCZ-201ENST00000378567 CSTF2P33240 577 aaKnown RBP eCLIP20.94■□□□□ 0.948e-7■■■■□ 19.5
PRKCZ-201ENST00000378567 PTBP1P26599 531 aaKnown RBP eCLIP20.36■□□□□ 0.859e-15■■■□□ 19.1
PRKCZ-201ENST00000378567 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.26■□□□□ 0.351e-6■■■□□ 18.3
PRKCZ-201ENST00000378567 SF3A3Q12874 501 aaKnown RBP eCLIP23.4■■□□□ 1.348e-8■■■□□ 17.9
PRKCZ-201ENST00000378567 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.25■□□□□ 0.837e-7■■■□□ 17.3
PRKCZ-201ENST00000378567 SFPQP23246 707 aaKnown RBP eCLIP25.5■■□□□ 1.672e-6■■■□□ 16.3
PRKCZ-201ENST00000378567 ILF3Q12906 894 aaKnown RBP eCLIP21.17■□□□□ 0.983e-6■■■□□ 16
PRKCZ-201ENST00000378567 GTF2F1P35269 517 aaKnown RBP eCLIP25.42■■□□□ 1.665e-7■■■□□ 15.3
PRKCZ-201ENST00000378567 PRPF4O43172 522 aaKnown RBP eCLIP23.31■■□□□ 1.325e-6■■■□□ 15.1
PRKCZ-201ENST00000378567 PPIGQ13427 754 aaKnown RBP eCLIP22.12■■□□□ 1.137e-8■■■□□ 14.8
PRKCZ-201ENST00000378567 UPF1Q92900 1129 aaKnown RBP eCLIP24.26■■□□□ 1.471e-7■■■□□ 14.7
PRKCZ-201ENST00000378567 NKRFO15226 690 aaKnown RBP eCLIP25.07■■□□□ 1.62e-6■■□□□ 14.2
PRKCZ-201ENST00000378567 EIF4G2P78344 907 aaKnown RBP eCLIP31.7■■■□□ 2.664e-6■■□□□ 14
PRKCZ-201ENST00000378567 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.17■■□□□ 1.621e-6■■□□□ 13.6
PRKCZ-201ENST00000378567 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.43■■■□□ 2.623e-6■■□□□ 12.9
PRKCZ-201ENST00000378567 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.37■■■□□ 2.297e-8■■□□□ 12.1
PRKCZ-201ENST00000378567 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.56■■□□□ 1.363e-6■■□□□ 11.8
PRKCZ-201ENST00000378567 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.24■■□□□ 1.473e-6■■□□□ 11.7
PRKCZ-201ENST00000378567 HNRNPLP14866 589 aaKnown RBP eCLIP22.53■■□□□ 1.21e-6■■□□□ 11.7
PRKCZ-201ENST00000378567 DDX3XO00571 662 aaKnown RBP eCLIP24.47■■□□□ 1.513e-11■■□□□ 11.5
PRKCZ-201ENST00000378567 HNRNPCP07910 306 aaKnown RBP eCLIP20.7■□□□□ 0.94e-12■□□□□ 11.1
Retrieved 49 of 49 RNA–protein pairs in 11.2 ms