RNA–Protein interactions for RNA: ENST00000278612.8

NPAT-201, Transcript of nuclear protein, coactivator of histone transcription, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NPAT, Length 6,117 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAT-201ENST00000278612 AEBP2Q6ZN18 517 aaPredicted RBP5.11□□□□□ -1.59
NPAT-201ENST00000278612 CHIC1Q5VXU3 224 aa4.84□□□□□ -1.63
NPAT-201ENST00000278612 PHF23Q9BUL5 403 aaPredicted RBP4.47□□□□□ -1.69
NPAT-201ENST00000278612 DNAJC5BQ9UF47 199 aa4.43□□□□□ -1.7
NPAT-201ENST00000278612 ADRA2BP18089 450 aa4.12□□□□□ -1.75
NPAT-201ENST00000278612 PPP6R1Q9UPN7 881 aa4.04□□□□□ -1.76
NPAT-201ENST00000278612 SENP3Q9H4L4 574 aaPredicted RBP4.03□□□□□ -1.76
NPAT-201ENST00000278612 EHMT2Q96KQ7 1210 aa4.01□□□□□ -1.77
NPAT-201ENST00000278612 PLPPR3Q6T4P5 718 aa3.97□□□□□ -1.77
NPAT-201ENST00000278612 FOXD1Q16676 465 aa3.94□□□□□ -1.78
NPAT-201ENST00000278612 KCNA4P22459 653 aa3.88□□□□□ -1.79
NPAT-201ENST00000278612 PIAS4Q8N2W9 510 aaPredicted RBP3.81□□□□□ -1.8
NPAT-201ENST00000278612 MAPK8IP2Q13387 824 aaPredicted RBP3.71□□□□□ -1.82
NPAT-201ENST00000278612 PPP4R3CPQ6ZMV5 832 aa3.62□□□□□ -1.83
NPAT-201ENST00000278612 ZBTB22O15209 634 aa3.6□□□□□ -1.83
NPAT-201ENST00000278612 CSRNP3Q8WYN3 585 aa3.59□□□□□ -1.83
NPAT-201ENST00000278612 SLC4A1APQ9BWU0 796 aaKnown RBP3.59□□□□□ -1.83
NPAT-201ENST00000278612 DCAF8L1A6NGE4 600 aa3.57□□□□□ -1.84
NPAT-201ENST00000278612 NPM3O75607 178 aaKnown RBP3.56□□□□□ -1.84
NPAT-201ENST00000278612 POTEDQ86YR6 584 aa3.52□□□□□ -1.85
NPAT-201ENST00000278612 ATF5Q9Y2D1 282 aaPredicted RBP3.37□□□□□ -1.87
NPAT-201ENST00000278612 RTN4Q9NQC3 1192 aaKnown RBP3.36□□□□□ -1.87
NPAT-201ENST00000278612 NCBP3Q53F19 620 aaKnown RBP3.36□□□□□ -1.87
NPAT-201ENST00000278612 SLC4A2P04920 1241 aa3.35□□□□□ -1.87
NPAT-201ENST00000278612 FKBP8Q14318 412 aa3.34□□□□□ -1.87
NPAT-201ENST00000278612 CNKSR2Q8WXI2 1034 aa3.34□□□□□ -1.87
NPAT-201ENST00000278612 PROM2Q8N271 834 aa3.32□□□□□ -1.88
NPAT-201ENST00000278612 MSH5O43196 834 aa3.3□□□□□ -1.88
NPAT-201ENST00000278612 FOXD4L1Q9NU39 408 aa3.3□□□□□ -1.88
NPAT-201ENST00000278612 DCAF8L2P0C7V8 631 aa3.29□□□□□ -1.88
NPAT-201ENST00000278612 SCAF1Q9H7N4 1312 aaKnown RBP3.28□□□□□ -1.88
NPAT-201ENST00000278612 ABCB7O75027 752 aa3.28□□□□□ -1.88
NPAT-201ENST00000278612 TRHP20396 242 aaPredicted RBP3.27□□□□□ -1.89
NPAT-201ENST00000278612 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.27□□□□□ -1.89
NPAT-201ENST00000278612 SPINK5Q9NQ38 1064 aaPredicted RBP3.26□□□□□ -1.89
NPAT-201ENST00000278612 DMRT2Q9Y5R5 561 aa3.22□□□□□ -1.89
NPAT-201ENST00000278612 DNAJC5Q9H3Z4 198 aa3.22□□□□□ -1.89
NPAT-201ENST00000278612 RNF216Q9NWF9 866 aaPredicted RBP3.21□□□□□ -1.9
NPAT-201ENST00000278612 U3KPZ7 1027 aaPredicted RBP3.2□□□□□ -1.9
NPAT-201ENST00000278612 CAPN15O75808 1086 aa3.18□□□□□ -1.9
NPAT-201ENST00000278612 HOXD11P31277 338 aaPredicted RBP3.14□□□□□ -1.91
NPAT-201ENST00000278612 POLA2Q14181 598 aa3.14□□□□□ -1.91
NPAT-201ENST00000278612 TRIM41Q8WV44 630 aa3.14□□□□□ -1.91
NPAT-201ENST00000278612 ZFHX3Q15911 3703 aa3.12□□□□□ -1.91
NPAT-201ENST00000278612 PRKCSHP14314 528 aaPredicted RBP3.12□□□□□ -1.91
NPAT-201ENST00000278612 RBAK-RBAKDNI3L0D1 243 aa3.12□□□□□ -1.91
NPAT-201ENST00000278612 MYCNP04198 464 aaPredicted RBP3.12□□□□□ -1.91
NPAT-201ENST00000278612 SRCAPQ6ZRS2 3230 aa3.12□□□□□ -1.91
NPAT-201ENST00000278612 MKRN4PQ13434 485 aaPredicted RBP3.11□□□□□ -1.91
NPAT-201ENST00000278612 OSCARQ8IYS5 282 aa3.1□□□□□ -1.91
NPAT-201ENST00000278612 SLC24A1O60721 1099 aa3.1□□□□□ -1.91
NPAT-201ENST00000278612 UTRNP46939 3433 aa3.1□□□□□ -1.91
NPAT-201ENST00000278612 ZNF219Q9P2Y4 722 aaPredicted RBP3.07□□□□□ -1.92
NPAT-201ENST00000278612 SPDYE4A6NLX3 237 aa3.06□□□□□ -1.92
NPAT-201ENST00000278612 KLHL34Q8N239 644 aa3.04□□□□□ -1.92
NPAT-201ENST00000278612 HAP1P54257 671 aaPredicted RBP3.04□□□□□ -1.92
NPAT-201ENST00000278612 USP34Q70CQ2 3546 aa3.04□□□□□ -1.92
NPAT-201ENST00000278612 FBLN2P98095 1184 aa3.04□□□□□ -1.92
NPAT-201ENST00000278612 IFNLR1Q8IU57 520 aaPredicted RBP3.03□□□□□ -1.92
NPAT-201ENST00000278612 CFAP44Q96MT7 982 aa3.03□□□□□ -1.92
NPAT-201ENST00000278612 CLEC11AQ9Y240 323 aa3.02□□□□□ -1.93
NPAT-201ENST00000278612 CIZ1Q9ULV3 898 aaPredicted RBP3.01□□□□□ -1.93
NPAT-201ENST00000278612 PLCD3Q8N3E9 789 aa2.99□□□□□ -1.93
NPAT-201ENST00000278612 PABPN1Q86U42 306 aaKnown RBP eCLIP2.99□□□□□ -1.93
NPAT-201ENST00000278612 VASPP50552 380 aaPredicted RBP2.98□□□□□ -1.93
NPAT-201ENST00000278612 CHADLQ6NUI6 762 aa2.98□□□□□ -1.93
NPAT-201ENST00000278612 RGL2O15211 777 aa2.97□□□□□ -1.93
NPAT-201ENST00000278612 SAMD1Q6SPF0 538 aaPredicted RBP2.97□□□□□ -1.93
NPAT-201ENST00000278612 ZNF692Q9BU19 519 aaPredicted RBP2.97□□□□□ -1.93
NPAT-201ENST00000278612 AMER1Q5JTC6 1135 aaPredicted RBP2.97□□□□□ -1.93
NPAT-201ENST00000278612 MIER1Q8N108 512 aa2.97□□□□□ -1.93
NPAT-201ENST00000278612 CACNB1Q02641 598 aaPredicted RBP2.96□□□□□ -1.94
NPAT-201ENST00000278612 PAXIP1Q6ZW49 1069 aaPredicted RBP2.96□□□□□ -1.94
NPAT-201ENST00000278612 NPM1P06748 294 aaKnown RBP eCLIP2.96□□□□□ -1.94
NPAT-201ENST00000278612 RNF39Q9H2S5 420 aa2.96□□□□□ -1.94
NPAT-201ENST00000278612 CHGAP10645 457 aaKnown RBP2.95□□□□□ -1.94
NPAT-201ENST00000278612 PKD2Q13563 968 aa2.95□□□□□ -1.94
NPAT-201ENST00000278612 DSG3P32926 999 aa2.93□□□□□ -1.94
NPAT-201ENST00000278612 TSHZ2Q9NRE2 1034 aa2.93□□□□□ -1.94
NPAT-201ENST00000278612 ECM2O94769 699 aaPredicted RBP2.92□□□□□ -1.94
NPAT-201ENST00000278612 PYGBP11216 843 aa2.92□□□□□ -1.94
NPAT-201ENST00000278612 PCNTO95613 3336 aa2.92□□□□□ -1.94
NPAT-201ENST00000278612 KDM2AQ9Y2K7 1162 aa2.92□□□□□ -1.94
NPAT-201ENST00000278612 GOLGB1Q14789 3259 aaKnown RBP2.91□□□□□ -1.94
NPAT-201ENST00000278612 TSPYL2Q9H2G4 693 aaPredicted RBP2.91□□□□□ -1.94
NPAT-201ENST00000278612 RNF25Q96BH1 459 aaPredicted RBP2.91□□□□□ -1.94
NPAT-201ENST00000278612 TPRNQ4KMQ1 711 aa2.9□□□□□ -1.94
NPAT-201ENST00000278612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.89□□□□□ -1.95
NPAT-201ENST00000278612 HNRNPUL2Q1KMD3 747 aaKnown RBP2.89□□□□□ -1.95
NPAT-201ENST00000278612 EP400Q96L91 3159 aa2.89□□□□□ -1.95
NPAT-201ENST00000278612 PLCB2Q00722 1185 aa2.89□□□□□ -1.95
NPAT-201ENST00000278612 KRTAP17-1Q9BYP8 105 aa2.88□□□□□ -1.95
NPAT-201ENST00000278612 ATXN8OSP0DMR3 200 aa2.87□□□□□ -1.95
NPAT-201ENST00000278612 STK25O00506 426 aa2.86□□□□□ -1.95
NPAT-201ENST00000278612 WDFY3Q8IZQ1 3526 aa2.86□□□□□ -1.95
NPAT-201ENST00000278612 DCAF8Q5TAQ9 597 aa2.86□□□□□ -1.95
NPAT-201ENST00000278612 PCDHB8Q9UN66 801 aa2.85□□□□□ -1.95
NPAT-201ENST00000278612 PCDHB13Q9Y5F0 798 aa2.85□□□□□ -1.95
NPAT-201ENST00000278612 RASEFQ8IZ41 740 aa2.85□□□□□ -1.95
NPAT-201ENST00000278612 ILDR1Q86SU0 546 aaPredicted RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms