RNA–Protein interactions for RNA: ENSMUST00000173004.1

Lsm2-207, Transcript of U6 snRNA-associated Sm-like protein LSm2, mousemouse

TSL 1 (best) BASIC

Gene Lsm2, Length 870 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2-207ENSMUST00000173004 Gm35339A0A140LHH9 1649 aa30.06■■■□□ 2.4
Lsm2-207ENSMUST00000173004 Abcc9P70170 1546 aa29.62■■■□□ 2.33
Lsm2-207ENSMUST00000173004 NischQ80TM9 1593 aa29.17■■■□□ 2.26
Lsm2-207ENSMUST00000173004 Abcc8B2RUS7 1588 aa28.67■■■□□ 2.18
Lsm2-207ENSMUST00000173004 ScribQ80U72 1612 aa28.51■■■□□ 2.15
Lsm2-207ENSMUST00000173004 Dnajc5bQ9CQ94 199 aa28.43■■■□□ 2.14
Lsm2-207ENSMUST00000173004 NacadQ5SWP3 1504 aa27.25■■□□□ 1.95
Lsm2-207ENSMUST00000173004 Kdm5dQ62240 1548 aa27.17■■□□□ 1.94
Lsm2-207ENSMUST00000173004 Sycp2Q9CUU3 1500 aa26.86■■□□□ 1.89
Lsm2-207ENSMUST00000173004 BicraF8VPZ9 1578 aa26.84■■□□□ 1.89
Lsm2-207ENSMUST00000173004 Dnajc5P60904 198 aa26.77■■□□□ 1.88
Lsm2-207ENSMUST00000173004 Thoc2B1AZI6 1594 aaKnown RBP26.51■■□□□ 1.83
Lsm2-207ENSMUST00000173004 Pds5bQ4VA53 1446 aaKnown RBP26.12■■□□□ 1.77
Lsm2-207ENSMUST00000173004 Cc2d2aQ8CFW7 1633 aa26.03■■□□□ 1.76
Lsm2-207ENSMUST00000173004 Dcaf1Q80TR8 1506 aa26■■□□□ 1.75
Lsm2-207ENSMUST00000173004 Trim41Q5NCC3 630 aa25.89■■□□□ 1.74
Lsm2-207ENSMUST00000173004 Atad2bE9Q166 1460 aaKnown RBP25.66■■□□□ 1.7
Lsm2-207ENSMUST00000173004 Fam135aQ6NS59 1506 aa25.58■■□□□ 1.68
Lsm2-207ENSMUST00000173004 Ercc6F8VPZ5 1481 aa25.45■■□□□ 1.66
Lsm2-207ENSMUST00000173004 Rb1cc1Q9ESK9 1588 aa25.27■■□□□ 1.64
Lsm2-207ENSMUST00000173004 Smarca2Q6DIC0 1577 aa25.23■■□□□ 1.63
Lsm2-207ENSMUST00000173004 Phldb1Q6PDH0 1371 aaKnown RBP25.13■■□□□ 1.61
Lsm2-207ENSMUST00000173004 Frmpd1A2AKB4 1549 aa25.07■■□□□ 1.6
Lsm2-207ENSMUST00000173004 Ubl4bQ9CQ84 188 aa25.06■■□□□ 1.6
Lsm2-207ENSMUST00000173004 Wdr62Q3U3T8 1523 aa25■■□□□ 1.59
Lsm2-207ENSMUST00000173004 Iqgap2Q3UQ44 1575 aa24.98■■□□□ 1.59
Lsm2-207ENSMUST00000173004 Mrc2Q64449 1479 aa24.96■■□□□ 1.59
Lsm2-207ENSMUST00000173004 Baz1bQ9Z277 1479 aa24.94■■□□□ 1.58
Lsm2-207ENSMUST00000173004 Smarca4Q3TKT4 1613 aaKnown RBP24.88■■□□□ 1.57
Lsm2-207ENSMUST00000173004 Crybg2B7ZCC2 1516 aa24.85■■□□□ 1.57
Lsm2-207ENSMUST00000173004 Baz1aO88379 1555 aa24.78■■□□□ 1.56
Lsm2-207ENSMUST00000173004 Zcchc6Q5BLK4 1491 aaKnown RBP24.74■■□□□ 1.55
Lsm2-207ENSMUST00000173004 Col17a1Q07563 1470 aa24.72■■□□□ 1.55
Lsm2-207ENSMUST00000173004 Cecr2E9Q2Z1 1453 aa24.71■■□□□ 1.55
Lsm2-207ENSMUST00000173004 Shroom2A2ALU4 1481 aa24.64■■□□□ 1.54
Lsm2-207ENSMUST00000173004 Unc13aQ4KUS2 1712 aa24.58■■□□□ 1.53
Lsm2-207ENSMUST00000173004 Lrriq1Q0P5X1 1673 aa24.56■■□□□ 1.52
Lsm2-207ENSMUST00000173004 Rsf1E9PWW9 1441 aaKnown RBP24.46■■□□□ 1.51
Lsm2-207ENSMUST00000173004 Pcdh10E9PXQ7 1057 aa24.41■■□□□ 1.5
Lsm2-207ENSMUST00000173004 Ccdc180J3QNE4 1664 aa24.34■■□□□ 1.49
Lsm2-207ENSMUST00000173004 Pabpn1Q8CCS6 302 aaKnown RBP24.19■■□□□ 1.46
Lsm2-207ENSMUST00000173004 Eif4g3Q80XI3 1579 aaKnown RBP24.11■■□□□ 1.45
Lsm2-207ENSMUST00000173004 Kif21aQ9QXL2 1672 aa24.05■■□□□ 1.44
Lsm2-207ENSMUST00000173004 Top2bQ64511 1612 aa24.02■■□□□ 1.44
Lsm2-207ENSMUST00000173004 Cux2P70298 1426 aa23.96■■□□□ 1.43
Lsm2-207ENSMUST00000173004 Rhox8Q6VSS7 320 aa23.89■■□□□ 1.41
Lsm2-207ENSMUST00000173004 Pelp1Q9DBD5 1123 aaKnown RBP23.89■■□□□ 1.41
Lsm2-207ENSMUST00000173004 Zcchc11B2RX14 1644 aaKnown RBP23.84■■□□□ 1.41
Lsm2-207ENSMUST00000173004 Arhgef5E9Q7D5 1581 aa23.74■■□□□ 1.39
Lsm2-207ENSMUST00000173004 CftrP26361 1476 aa23.73■■□□□ 1.39
Lsm2-207ENSMUST00000173004 Urb2E9Q7L1 1524 aaKnown RBP23.7■■□□□ 1.38
Lsm2-207ENSMUST00000173004 Plb1Q3TTY0 1478 aa23.69■■□□□ 1.38
Lsm2-207ENSMUST00000173004 Kif15Q6P9L6 1387 aa23.65■■□□□ 1.38
Lsm2-207ENSMUST00000173004 Synj1Q8CHC4 1574 aa23.55■■□□□ 1.36
Lsm2-207ENSMUST00000173004 Cttnbp2B9EJA2 1648 aa23.54■■□□□ 1.36
Lsm2-207ENSMUST00000173004 Npm1Q61937 292 aaKnown RBP23.53■■□□□ 1.36
Lsm2-207ENSMUST00000173004 Adgrl3Q80TS3 1537 aa23.49■■□□□ 1.35
Lsm2-207ENSMUST00000173004 Ttbk1Q6PCN3 1308 aa23.48■■□□□ 1.35
Lsm2-207ENSMUST00000173004 PtprtQ99M80 1454 aa23.39■■□□□ 1.34
Lsm2-207ENSMUST00000173004 Gm156Q58A37 223 aa23.37■■□□□ 1.33
Lsm2-207ENSMUST00000173004 Rusc2Q80U22 1514 aa23.36■■□□□ 1.33
Lsm2-207ENSMUST00000173004 Dhx29Q6PGC1 1365 aaKnown RBP23.36■■□□□ 1.33
Lsm2-207ENSMUST00000173004 Cep164Q5DU05 1446 aa23.29■■□□□ 1.32
Lsm2-207ENSMUST00000173004 Lamc3Q9R0B6 1581 aa23.25■■□□□ 1.31
Lsm2-207ENSMUST00000173004 PtprkP35822 1457 aa23.24■■□□□ 1.31
Lsm2-207ENSMUST00000173004 Plekhg3Q4VAC9 1341 aa23.19■■□□□ 1.3
Lsm2-207ENSMUST00000173004 Cep170Q6A065 1588 aa23.18■■□□□ 1.3
Lsm2-207ENSMUST00000173004 Chic1Q8CBW7 227 aa23.17■■□□□ 1.3
Lsm2-207ENSMUST00000173004 Cypt1Q8CH20 168 aa23.15■■□□□ 1.3
Lsm2-207ENSMUST00000173004 Pprc1Q6NZN1 1644 aa23.12■■□□□ 1.29
Lsm2-207ENSMUST00000173004 Esf1Q3V1V3 845 aaKnown RBP23.12■■□□□ 1.29
Lsm2-207ENSMUST00000173004 Ift140E9PY46 1464 aa23.11■■□□□ 1.29
Lsm2-207ENSMUST00000173004 Crocc2F6XLV1 1638 aa23.1■■□□□ 1.29
Lsm2-207ENSMUST00000173004 Gapvd1Q6PAR5 1458 aa23.1■■□□□ 1.29
Lsm2-207ENSMUST00000173004 Brd4Q9ESU6 1400 aaKnown RBP23.09■■□□□ 1.29
Lsm2-207ENSMUST00000173004 Il27Q8K3I6 234 aa23.08■■□□□ 1.29
Lsm2-207ENSMUST00000173004 LrpprcQ6PB66 1392 aaKnown RBP23.06■■□□□ 1.28
Lsm2-207ENSMUST00000173004 Disp1Q3TDN0 1521 aa22.96■■□□□ 1.27
Lsm2-207ENSMUST00000173004 Mapk8ip2Q9ERE9 830 aa22.88■■□□□ 1.25
Lsm2-207ENSMUST00000173004 Rapgef2Q8CHG7 1496 aa22.84■■□□□ 1.25
Lsm2-207ENSMUST00000173004 PogzQ8BZH4 1409 aaKnown RBP22.82■■□□□ 1.24
Lsm2-207ENSMUST00000173004 Ythdc2B2RR83 1445 aaKnown RBP22.81■■□□□ 1.24
Lsm2-207ENSMUST00000173004 Nup160Q9Z0W3 1402 aaKnown RBP22.81■■□□□ 1.24
Lsm2-207ENSMUST00000173004 Ccdc18Q640L5 1455 aa22.79■■□□□ 1.24
Lsm2-207ENSMUST00000173004 Setd1bQ8CFT2 1985 aa22.78■■□□□ 1.24
Lsm2-207ENSMUST00000173004 Ccdc136Q3TVA9 1136 aa22.78■■□□□ 1.24
Lsm2-207ENSMUST00000173004 Fgd6Q69ZL1 1399 aa22.76■■□□□ 1.23
Lsm2-207ENSMUST00000173004 Cc2d2bA0A286YDU8 1405 aa22.74■■□□□ 1.23
Lsm2-207ENSMUST00000173004 Ppp1r18Q8BQ30 594 aa22.74■■□□□ 1.23
Lsm2-207ENSMUST00000173004 Setbp1Q9Z180 1582 aa22.72■■□□□ 1.23
Lsm2-207ENSMUST00000173004 Camsap1A2AHC3 1581 aa22.69■■□□□ 1.22
Lsm2-207ENSMUST00000173004 Duox2A2AQ99 1517 aa22.69■■□□□ 1.22
Lsm2-207ENSMUST00000173004 Golga3P55937 1487 aa22.69■■□□□ 1.22
Lsm2-207ENSMUST00000173004 Abcc1O35379 1528 aa22.66■■□□□ 1.22
Lsm2-207ENSMUST00000173004 Alpk3Q924C5 1678 aa22.65■■□□□ 1.22
Lsm2-207ENSMUST00000173004 TnnQ80Z71 1560 aa22.59■■□□□ 1.21
Lsm2-207ENSMUST00000173004 AknaQ80VW7 1404 aa22.59■■□□□ 1.21
Lsm2-207ENSMUST00000173004 Ccdc88bQ4QRL3 1481 aa22.57■■□□□ 1.2
Lsm2-207ENSMUST00000173004 Cyb5rlB1AS42 316 aa22.55■■□□□ 1.2
Lsm2-207ENSMUST00000173004 AqrQ8CFQ3 1481 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 22,080 RNA–protein pairs in 127.6 ms