RNA–Protein interactions for RNA: ENSMUST00000127836.7

Pdlim2-204, Transcript of PDZ and LIM domain protein 2, mousemouse

TSL 5 BASIC

Gene Pdlim2, Length 920 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2-204ENSMUST00000127836 Gm35339A0A140LHH9 1649 aa28.77■■■□□ 2.2
Pdlim2-204ENSMUST00000127836 Abcc9P70170 1546 aa28.65■■■□□ 2.18
Pdlim2-204ENSMUST00000127836 NischQ80TM9 1593 aa27.89■■■□□ 2.05
Pdlim2-204ENSMUST00000127836 Dnajc5bQ9CQ94 199 aa27.54■■■□□ 2
Pdlim2-204ENSMUST00000127836 Abcc8B2RUS7 1588 aa27.39■■□□□ 1.98
Pdlim2-204ENSMUST00000127836 ScribQ80U72 1612 aa27.35■■□□□ 1.97
Pdlim2-204ENSMUST00000127836 Dnajc5P60904 198 aa26.22■■□□□ 1.79
Pdlim2-204ENSMUST00000127836 NacadQ5SWP3 1504 aa26.18■■□□□ 1.78
Pdlim2-204ENSMUST00000127836 Kdm5dQ62240 1548 aa26.06■■□□□ 1.76
Pdlim2-204ENSMUST00000127836 Sycp2Q9CUU3 1500 aa25.78■■□□□ 1.72
Pdlim2-204ENSMUST00000127836 BicraF8VPZ9 1578 aa25.76■■□□□ 1.71
Pdlim2-204ENSMUST00000127836 Thoc2B1AZI6 1594 aaKnown RBP25.59■■□□□ 1.69
Pdlim2-204ENSMUST00000127836 Trim41Q5NCC3 630 aa25.35■■□□□ 1.65
Pdlim2-204ENSMUST00000127836 Pds5bQ4VA53 1446 aaKnown RBP25.2■■□□□ 1.63
Pdlim2-204ENSMUST00000127836 Cc2d2aQ8CFW7 1633 aa25.2■■□□□ 1.62
Pdlim2-204ENSMUST00000127836 Dcaf1Q80TR8 1506 aa24.81■■□□□ 1.56
Pdlim2-204ENSMUST00000127836 Atad2bE9Q166 1460 aaKnown RBP24.68■■□□□ 1.54
Pdlim2-204ENSMUST00000127836 Fam135aQ6NS59 1506 aa24.66■■□□□ 1.54
Pdlim2-204ENSMUST00000127836 Ercc6F8VPZ5 1481 aa24.63■■□□□ 1.53
Pdlim2-204ENSMUST00000127836 Smarca2Q6DIC0 1577 aa24.26■■□□□ 1.47
Pdlim2-204ENSMUST00000127836 Ubl4bQ9CQ84 188 aa24.23■■□□□ 1.47
Pdlim2-204ENSMUST00000127836 Phldb1Q6PDH0 1371 aaKnown RBP24.23■■□□□ 1.47
Pdlim2-204ENSMUST00000127836 Rb1cc1Q9ESK9 1588 aa24.23■■□□□ 1.47
Pdlim2-204ENSMUST00000127836 Mrc2Q64449 1479 aa24.13■■□□□ 1.45
Pdlim2-204ENSMUST00000127836 Baz1bQ9Z277 1479 aa24.08■■□□□ 1.45
Pdlim2-204ENSMUST00000127836 Frmpd1A2AKB4 1549 aa24.07■■□□□ 1.44
Pdlim2-204ENSMUST00000127836 Wdr62Q3U3T8 1523 aa24.03■■□□□ 1.44
Pdlim2-204ENSMUST00000127836 Iqgap2Q3UQ44 1575 aa24.02■■□□□ 1.44
Pdlim2-204ENSMUST00000127836 Col17a1Q07563 1470 aa23.98■■□□□ 1.43
Pdlim2-204ENSMUST00000127836 Smarca4Q3TKT4 1613 aaKnown RBP23.9■■□□□ 1.42
Pdlim2-204ENSMUST00000127836 Shroom2A2ALU4 1481 aa23.89■■□□□ 1.42
Pdlim2-204ENSMUST00000127836 Lrriq1Q0P5X1 1673 aa23.77■■□□□ 1.4
Pdlim2-204ENSMUST00000127836 Pcdh10E9PXQ7 1057 aa23.74■■□□□ 1.39
Pdlim2-204ENSMUST00000127836 Zcchc6Q5BLK4 1491 aaKnown RBP23.73■■□□□ 1.39
Pdlim2-204ENSMUST00000127836 Crybg2B7ZCC2 1516 aa23.7■■□□□ 1.38
Pdlim2-204ENSMUST00000127836 Unc13aQ4KUS2 1712 aa23.7■■□□□ 1.38
Pdlim2-204ENSMUST00000127836 Rsf1E9PWW9 1441 aaKnown RBP23.67■■□□□ 1.38
Pdlim2-204ENSMUST00000127836 Baz1aO88379 1555 aa23.66■■□□□ 1.38
Pdlim2-204ENSMUST00000127836 Cecr2E9Q2Z1 1453 aa23.58■■□□□ 1.37
Pdlim2-204ENSMUST00000127836 Pabpn1Q8CCS6 302 aaKnown RBP23.52■■□□□ 1.36
Pdlim2-204ENSMUST00000127836 Top2bQ64511 1612 aa23.39■■□□□ 1.33
Pdlim2-204ENSMUST00000127836 Eif4g3Q80XI3 1579 aaKnown RBP23.32■■□□□ 1.32
Pdlim2-204ENSMUST00000127836 Pelp1Q9DBD5 1123 aaKnown RBP23.3■■□□□ 1.32
Pdlim2-204ENSMUST00000127836 Ccdc180J3QNE4 1664 aa23.26■■□□□ 1.31
Pdlim2-204ENSMUST00000127836 Kif21aQ9QXL2 1672 aa23.2■■□□□ 1.3
Pdlim2-204ENSMUST00000127836 Zcchc11B2RX14 1644 aaKnown RBP23.15■■□□□ 1.3
Pdlim2-204ENSMUST00000127836 Arhgef5E9Q7D5 1581 aa23.13■■□□□ 1.29
Pdlim2-204ENSMUST00000127836 Cux2P70298 1426 aa23.07■■□□□ 1.28
Pdlim2-204ENSMUST00000127836 Ttbk1Q6PCN3 1308 aa22.99■■□□□ 1.27
Pdlim2-204ENSMUST00000127836 Cypt1Q8CH20 168 aa22.87■■□□□ 1.25
Pdlim2-204ENSMUST00000127836 Plb1Q3TTY0 1478 aa22.85■■□□□ 1.25
Pdlim2-204ENSMUST00000127836 Rhox8Q6VSS7 320 aa22.84■■□□□ 1.25
Pdlim2-204ENSMUST00000127836 Urb2E9Q7L1 1524 aaKnown RBP22.81■■□□□ 1.24
Pdlim2-204ENSMUST00000127836 Adgrl3Q80TS3 1537 aa22.77■■□□□ 1.24
Pdlim2-204ENSMUST00000127836 Plekhg3Q4VAC9 1341 aa22.77■■□□□ 1.24
Pdlim2-204ENSMUST00000127836 Kif15Q6P9L6 1387 aa22.75■■□□□ 1.23
Pdlim2-204ENSMUST00000127836 Npm1Q61937 292 aaKnown RBP22.73■■□□□ 1.23
Pdlim2-204ENSMUST00000127836 CftrP26361 1476 aa22.64■■□□□ 1.21
Pdlim2-204ENSMUST00000127836 PtprtQ99M80 1454 aa22.64■■□□□ 1.21
Pdlim2-204ENSMUST00000127836 Gm156Q58A37 223 aa22.6■■□□□ 1.21
Pdlim2-204ENSMUST00000127836 Cttnbp2B9EJA2 1648 aa22.56■■□□□ 1.2
Pdlim2-204ENSMUST00000127836 Rusc2Q80U22 1514 aa22.52■■□□□ 1.2
Pdlim2-204ENSMUST00000127836 PtprkP35822 1457 aa22.51■■□□□ 1.19
Pdlim2-204ENSMUST00000127836 Synj1Q8CHC4 1574 aa22.48■■□□□ 1.19
Pdlim2-204ENSMUST00000127836 Dhx29Q6PGC1 1365 aaKnown RBP22.46■■□□□ 1.19
Pdlim2-204ENSMUST00000127836 Cep164Q5DU05 1446 aa22.44■■□□□ 1.18
Pdlim2-204ENSMUST00000127836 Cep170Q6A065 1588 aa22.44■■□□□ 1.18
Pdlim2-204ENSMUST00000127836 Gapvd1Q6PAR5 1458 aa22.34■■□□□ 1.17
Pdlim2-204ENSMUST00000127836 Pprc1Q6NZN1 1644 aa22.31■■□□□ 1.16
Pdlim2-204ENSMUST00000127836 Esf1Q3V1V3 845 aaKnown RBP22.28■■□□□ 1.16
Pdlim2-204ENSMUST00000127836 Lamc3Q9R0B6 1581 aa22.26■■□□□ 1.15
Pdlim2-204ENSMUST00000127836 Il27Q8K3I6 234 aa22.26■■□□□ 1.15
Pdlim2-204ENSMUST00000127836 Crocc2F6XLV1 1638 aa22.26■■□□□ 1.15
Pdlim2-204ENSMUST00000127836 Ift140E9PY46 1464 aa22.26■■□□□ 1.15
Pdlim2-204ENSMUST00000127836 Ppp1r18Q8BQ30 594 aa22.14■■□□□ 1.13
Pdlim2-204ENSMUST00000127836 LrpprcQ6PB66 1392 aaKnown RBP22.13■■□□□ 1.13
Pdlim2-204ENSMUST00000127836 Cyb5rlB1AS42 316 aa22.1■■□□□ 1.13
Pdlim2-204ENSMUST00000127836 Fbxo41Q6NS60 873 aa22.08■■□□□ 1.13
Pdlim2-204ENSMUST00000127836 Brd4Q9ESU6 1400 aaKnown RBP22.06■■□□□ 1.12
Pdlim2-204ENSMUST00000127836 Rapgef2Q8CHG7 1496 aa22.04■■□□□ 1.12
Pdlim2-204ENSMUST00000127836 Disp1Q3TDN0 1521 aa22.01■■□□□ 1.11
Pdlim2-204ENSMUST00000127836 Setd1bQ8CFT2 1985 aa21.99■■□□□ 1.11
Pdlim2-204ENSMUST00000127836 Ythdc2B2RR83 1445 aaKnown RBP21.99■■□□□ 1.11
Pdlim2-204ENSMUST00000127836 Alpk3Q924C5 1678 aa21.99■■□□□ 1.11
Pdlim2-204ENSMUST00000127836 Plppr3Q7TPB0 716 aa21.95■■□□□ 1.1
Pdlim2-204ENSMUST00000127836 Fgd6Q69ZL1 1399 aa21.95■■□□□ 1.1
Pdlim2-204ENSMUST00000127836 Ccdc18Q640L5 1455 aa21.93■■□□□ 1.1
Pdlim2-204ENSMUST00000127836 Setbp1Q9Z180 1582 aa21.91■■□□□ 1.1
Pdlim2-204ENSMUST00000127836 Cc2d2bA0A286YDU8 1405 aa21.89■■□□□ 1.09
Pdlim2-204ENSMUST00000127836 Ccdc88bQ4QRL3 1481 aa21.88■■□□□ 1.09
Pdlim2-204ENSMUST00000127836 Camsap1A2AHC3 1581 aa21.87■■□□□ 1.09
Pdlim2-204ENSMUST00000127836 Nup160Q9Z0W3 1402 aaKnown RBP21.87■■□□□ 1.09
Pdlim2-204ENSMUST00000127836 Abcc1O35379 1528 aa21.85■■□□□ 1.09
Pdlim2-204ENSMUST00000127836 AknaQ80VW7 1404 aa21.85■■□□□ 1.09
Pdlim2-204ENSMUST00000127836 PogzQ8BZH4 1409 aaKnown RBP21.85■■□□□ 1.09
Pdlim2-204ENSMUST00000127836 Ercc6l2Q9JIM3 1537 aa21.82■■□□□ 1.08
Pdlim2-204ENSMUST00000127836 Hecw2Q6I6G8 1578 aa21.81■■□□□ 1.08
Pdlim2-204ENSMUST00000127836 Golga3P55937 1487 aa21.8■■□□□ 1.08
Pdlim2-204ENSMUST00000127836 MlecQ6ZQI3 291 aaKnown RBP21.79■■□□□ 1.08
Pdlim2-204ENSMUST00000127836 Ak9G3UYQ4 1894 aa21.78■■□□□ 1.08
Retrieved 100 of 22,080 RNA–protein pairs in 92.4 ms