RNA–Protein interactions for RNA: ENSMUST00000096096.10

Cep55-201, Transcript of Centrosomal protein of 55 kDa, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cep55, Length 2,385 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cep55-201ENSMUST00000096096 Gm35339A0A140LHH9 1649 aa14.54□□□□□ -0.08
Cep55-201ENSMUST00000096096 Abcc9P70170 1546 aa14.08□□□□□ -0.16
Cep55-201ENSMUST00000096096 NischQ80TM9 1593 aa13.84□□□□□ -0.19
Cep55-201ENSMUST00000096096 Abcc8B2RUS7 1588 aa13.63□□□□□ -0.23
Cep55-201ENSMUST00000096096 ScribQ80U72 1612 aa13.61□□□□□ -0.23
Cep55-201ENSMUST00000096096 Dnajc5bQ9CQ94 199 aa13.39□□□□□ -0.27
Cep55-201ENSMUST00000096096 NacadQ5SWP3 1504 aa13.11□□□□□ -0.31
Cep55-201ENSMUST00000096096 Dnajc5P60904 198 aa13.07□□□□□ -0.32
Cep55-201ENSMUST00000096096 Kdm5dQ62240 1548 aa12.95□□□□□ -0.34
Cep55-201ENSMUST00000096096 Sycp2Q9CUU3 1500 aa12.88□□□□□ -0.35
Cep55-201ENSMUST00000096096 Thoc2B1AZI6 1594 aaKnown RBP12.87□□□□□ -0.35
Cep55-201ENSMUST00000096096 BicraF8VPZ9 1578 aa12.79□□□□□ -0.36
Cep55-201ENSMUST00000096096 Pds5bQ4VA53 1446 aaKnown RBP12.65□□□□□ -0.38
Cep55-201ENSMUST00000096096 Cc2d2aQ8CFW7 1633 aa12.54□□□□□ -0.4
Cep55-201ENSMUST00000096096 Dcaf1Q80TR8 1506 aa12.51□□□□□ -0.41
Cep55-201ENSMUST00000096096 Baz1bQ9Z277 1479 aa12.45□□□□□ -0.42
Cep55-201ENSMUST00000096096 Fam135aQ6NS59 1506 aa12.43□□□□□ -0.42
Cep55-201ENSMUST00000096096 Atad2bE9Q166 1460 aaKnown RBP12.36□□□□□ -0.43
Cep55-201ENSMUST00000096096 Ercc6F8VPZ5 1481 aa12.35□□□□□ -0.43
Cep55-201ENSMUST00000096096 Trim41Q5NCC3 630 aa12.31□□□□□ -0.44
Cep55-201ENSMUST00000096096 Rb1cc1Q9ESK9 1588 aa12.12□□□□□ -0.47
Cep55-201ENSMUST00000096096 Smarca2Q6DIC0 1577 aa12.1□□□□□ -0.47
Cep55-201ENSMUST00000096096 Phldb1Q6PDH0 1371 aaKnown RBP12.1□□□□□ -0.47
Cep55-201ENSMUST00000096096 Shroom2A2ALU4 1481 aa12.07□□□□□ -0.48
Cep55-201ENSMUST00000096096 Mrc2Q64449 1479 aa12.07□□□□□ -0.48
Cep55-201ENSMUST00000096096 Wdr62Q3U3T8 1523 aa12.02□□□□□ -0.49
Cep55-201ENSMUST00000096096 Col17a1Q07563 1470 aa12□□□□□ -0.49
Cep55-201ENSMUST00000096096 Iqgap2Q3UQ44 1575 aa11.98□□□□□ -0.49
Cep55-201ENSMUST00000096096 Crybg2B7ZCC2 1516 aa11.97□□□□□ -0.49
Cep55-201ENSMUST00000096096 Smarca4Q3TKT4 1613 aaKnown RBP11.95□□□□□ -0.5
Cep55-201ENSMUST00000096096 Frmpd1A2AKB4 1549 aa11.95□□□□□ -0.5
Cep55-201ENSMUST00000096096 Ubl4bQ9CQ84 188 aa11.9□□□□□ -0.5
Cep55-201ENSMUST00000096096 Rsf1E9PWW9 1441 aaKnown RBP11.89□□□□□ -0.51
Cep55-201ENSMUST00000096096 Ccdc180J3QNE4 1664 aa11.87□□□□□ -0.51
Cep55-201ENSMUST00000096096 Lrriq1Q0P5X1 1673 aa11.86□□□□□ -0.51
Cep55-201ENSMUST00000096096 Unc13aQ4KUS2 1712 aa11.81□□□□□ -0.52
Cep55-201ENSMUST00000096096 Baz1aO88379 1555 aa11.81□□□□□ -0.52
Cep55-201ENSMUST00000096096 Zcchc11B2RX14 1644 aaKnown RBP11.76□□□□□ -0.53
Cep55-201ENSMUST00000096096 Top2bQ64511 1612 aa11.75□□□□□ -0.53
Cep55-201ENSMUST00000096096 Eif4g3Q80XI3 1579 aaKnown RBP11.75□□□□□ -0.53
Cep55-201ENSMUST00000096096 Pabpn1Q8CCS6 302 aaKnown RBP11.66□□□□□ -0.54
Cep55-201ENSMUST00000096096 Zcchc6Q5BLK4 1491 aaKnown RBP11.64□□□□□ -0.55
Cep55-201ENSMUST00000096096 Arhgef5E9Q7D5 1581 aa11.64□□□□□ -0.55
Cep55-201ENSMUST00000096096 Pcdh10E9PXQ7 1057 aa11.59□□□□□ -0.55
Cep55-201ENSMUST00000096096 Cecr2E9Q2Z1 1453 aa11.58□□□□□ -0.56
Cep55-201ENSMUST00000096096 Kif21aQ9QXL2 1672 aa11.54□□□□□ -0.56
Cep55-201ENSMUST00000096096 Cypt1Q8CH20 168 aa11.46□□□□□ -0.57
Cep55-201ENSMUST00000096096 Cux2P70298 1426 aa11.39□□□□□ -0.59
Cep55-201ENSMUST00000096096 Adgrl3Q80TS3 1537 aa11.38□□□□□ -0.59
Cep55-201ENSMUST00000096096 Pelp1Q9DBD5 1123 aaKnown RBP11.38□□□□□ -0.59
Cep55-201ENSMUST00000096096 Plb1Q3TTY0 1478 aa11.36□□□□□ -0.59
Cep55-201ENSMUST00000096096 Ttbk1Q6PCN3 1308 aa11.31□□□□□ -0.6
Cep55-201ENSMUST00000096096 Urb2E9Q7L1 1524 aaKnown RBP11.3□□□□□ -0.6
Cep55-201ENSMUST00000096096 Rusc2Q80U22 1514 aa11.3□□□□□ -0.6
Cep55-201ENSMUST00000096096 Cttnbp2B9EJA2 1648 aa11.3□□□□□ -0.6
Cep55-201ENSMUST00000096096 Plekhg3Q4VAC9 1341 aa11.29□□□□□ -0.6
Cep55-201ENSMUST00000096096 PtprtQ99M80 1454 aa11.29□□□□□ -0.6
Cep55-201ENSMUST00000096096 Kif15Q6P9L6 1387 aa11.21□□□□□ -0.61
Cep55-201ENSMUST00000096096 CftrP26361 1476 aa11.21□□□□□ -0.62
Cep55-201ENSMUST00000096096 PtprkP35822 1457 aa11.21□□□□□ -0.62
Cep55-201ENSMUST00000096096 Cep170Q6A065 1588 aa11.2□□□□□ -0.62
Cep55-201ENSMUST00000096096 Cep164Q5DU05 1446 aa11.18□□□□□ -0.62
Cep55-201ENSMUST00000096096 Npm1Q61937 292 aaKnown RBP11.18□□□□□ -0.62
Cep55-201ENSMUST00000096096 Ift140E9PY46 1464 aa11.17□□□□□ -0.62
Cep55-201ENSMUST00000096096 Gm156Q58A37 223 aa11.14□□□□□ -0.63
Cep55-201ENSMUST00000096096 Lamc3Q9R0B6 1581 aa11.13□□□□□ -0.63
Cep55-201ENSMUST00000096096 Pprc1Q6NZN1 1644 aa11.13□□□□□ -0.63
Cep55-201ENSMUST00000096096 Gapvd1Q6PAR5 1458 aa11.11□□□□□ -0.63
Cep55-201ENSMUST00000096096 Crocc2F6XLV1 1638 aa11.1□□□□□ -0.63
Cep55-201ENSMUST00000096096 Dhx29Q6PGC1 1365 aaKnown RBP11.1□□□□□ -0.63
Cep55-201ENSMUST00000096096 Synj1Q8CHC4 1574 aa11.09□□□□□ -0.63
Cep55-201ENSMUST00000096096 Fbxo41Q6NS60 873 aa11.05□□□□□ -0.64
Cep55-201ENSMUST00000096096 DiexfQ8BTT6 772 aaKnown RBP11.04□□□□□ -0.64
Cep55-201ENSMUST00000096096 Alpk3Q924C5 1678 aa11.03□□□□□ -0.64
Cep55-201ENSMUST00000096096 Pbrm1Q8BSQ9 1634 aaKnown RBP10.99□□□□□ -0.65
Cep55-201ENSMUST00000096096 Arhgef11Q68FM7 1552 aa10.99□□□□□ -0.65
Cep55-201ENSMUST00000096096 Brd4Q9ESU6 1400 aaKnown RBP10.99□□□□□ -0.65
Cep55-201ENSMUST00000096096 Setbp1Q9Z180 1582 aa10.98□□□□□ -0.65
Cep55-201ENSMUST00000096096 Cc2d2bA0A286YDU8 1405 aa10.97□□□□□ -0.65
Cep55-201ENSMUST00000096096 Ccdc88bQ4QRL3 1481 aa10.96□□□□□ -0.65
Cep55-201ENSMUST00000096096 Rapgef2Q8CHG7 1496 aa10.96□□□□□ -0.65
Cep55-201ENSMUST00000096096 LrpprcQ6PB66 1392 aaKnown RBP10.96□□□□□ -0.66
Cep55-201ENSMUST00000096096 Rhox8Q6VSS7 320 aa10.94□□□□□ -0.66
Cep55-201ENSMUST00000096096 Fgd6Q69ZL1 1399 aa10.94□□□□□ -0.66
Cep55-201ENSMUST00000096096 Ccdc18Q640L5 1455 aa10.93□□□□□ -0.66
Cep55-201ENSMUST00000096096 Ube2uB1AUC4 352 aa10.92□□□□□ -0.66
Cep55-201ENSMUST00000096096 AdgbG3UZ78 1657 aa10.91□□□□□ -0.66
Cep55-201ENSMUST00000096096 Nup160Q9Z0W3 1402 aaKnown RBP10.91□□□□□ -0.66
Cep55-201ENSMUST00000096096 Ercc6l2Q9JIM3 1537 aa10.91□□□□□ -0.66
Cep55-201ENSMUST00000096096 Golga3P55937 1487 aa10.91□□□□□ -0.66
Cep55-201ENSMUST00000096096 Hecw2Q6I6G8 1578 aa10.9□□□□□ -0.67
Cep55-201ENSMUST00000096096 Disp1Q3TDN0 1521 aa10.89□□□□□ -0.67
Cep55-201ENSMUST00000096096 Cyb5rlB1AS42 316 aa10.89□□□□□ -0.67
Cep55-201ENSMUST00000096096 Setd1bQ8CFT2 1985 aa10.89□□□□□ -0.67
Cep55-201ENSMUST00000096096 EprsQ8CGC7 1512 aaKnown RBP10.88□□□□□ -0.67
Cep55-201ENSMUST00000096096 Abcc1O35379 1528 aa10.87□□□□□ -0.67
Cep55-201ENSMUST00000096096 Ythdc2B2RR83 1445 aaKnown RBP10.86□□□□□ -0.67
Cep55-201ENSMUST00000096096 Ak9G3UYQ4 1894 aa10.86□□□□□ -0.67
Cep55-201ENSMUST00000096096 PogzQ8BZH4 1409 aaKnown RBP10.86□□□□□ -0.67
Cep55-201ENSMUST00000096096 Ppp1r18Q8BQ30 594 aa10.85□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms