RNA–Protein interactions for RNA: ENSMUST00000068992.7

Pcdh9-201, Transcript of Protocadherin 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pcdh9, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-201ENSMUST00000068992 Gm35339A0A140LHH9 1649 aa16.69■□□□□ 0.26
Pcdh9-201ENSMUST00000068992 NischQ80TM9 1593 aa16.29■□□□□ 0.2
Pcdh9-201ENSMUST00000068992 Abcc9P70170 1546 aa16.13■□□□□ 0.17
Pcdh9-201ENSMUST00000068992 Abcc8B2RUS7 1588 aa15.63■□□□□ 0.09
Pcdh9-201ENSMUST00000068992 Rtl1Q7M732 1744 aa15.5■□□□□ 0.07
Pcdh9-201ENSMUST00000068992 Zcchc6Q5BLK4 1491 aaKnown RBP15.3■□□□□ 0.04
Pcdh9-201ENSMUST00000068992 Ccdc180J3QNE4 1664 aa15.08■□□□□ 0
Pcdh9-201ENSMUST00000068992 ScribQ80U72 1612 aa14.78□□□□□ -0.04
Pcdh9-201ENSMUST00000068992 Dcaf1Q80TR8 1506 aa14.65□□□□□ -0.06
Pcdh9-201ENSMUST00000068992 Rb1cc1Q9ESK9 1588 aa14.32□□□□□ -0.12
Pcdh9-201ENSMUST00000068992 Baz1aO88379 1555 aa14.18□□□□□ -0.14
Pcdh9-201ENSMUST00000068992 Kdm5dQ62240 1548 aa14.17□□□□□ -0.14
Pcdh9-201ENSMUST00000068992 Smarca2Q6DIC0 1577 aa14.12□□□□□ -0.15
Pcdh9-201ENSMUST00000068992 Acin1Q9JIX8 1338 aaKnown RBP14.03□□□□□ -0.16
Pcdh9-201ENSMUST00000068992 Rhox8Q6VSS7 320 aa13.96□□□□□ -0.17
Pcdh9-201ENSMUST00000068992 Rpgrip1Q9EPQ2 1331 aa13.92□□□□□ -0.18
Pcdh9-201ENSMUST00000068992 Crybg2B7ZCC2 1516 aa13.9□□□□□ -0.18
Pcdh9-201ENSMUST00000068992 Trim41Q5NCC3 630 aa13.89□□□□□ -0.19
Pcdh9-201ENSMUST00000068992 HrcG5E8J6 738 aa13.84□□□□□ -0.19
Pcdh9-201ENSMUST00000068992 NacadQ5SWP3 1504 aa13.71□□□□□ -0.21
Pcdh9-201ENSMUST00000068992 Top2bQ64511 1612 aa13.7□□□□□ -0.22
Pcdh9-201ENSMUST00000068992 Pcgf6Q99NA9 353 aa13.66□□□□□ -0.22
Pcdh9-201ENSMUST00000068992 Cep164Q5DU05 1446 aa13.64□□□□□ -0.23
Pcdh9-201ENSMUST00000068992 BicraF8VPZ9 1578 aa13.64□□□□□ -0.23
Pcdh9-201ENSMUST00000068992 Sycp2Q9CUU3 1500 aa13.6□□□□□ -0.23
Pcdh9-201ENSMUST00000068992 Rsf1E9PWW9 1441 aaKnown RBP13.56□□□□□ -0.24
Pcdh9-201ENSMUST00000068992 Eif4g1Q6NZJ6 1600 aaKnown RBP13.55□□□□□ -0.24
Pcdh9-201ENSMUST00000068992 Synj1Q8CHC4 1574 aa13.52□□□□□ -0.25
Pcdh9-201ENSMUST00000068992 Cecr2E9Q2Z1 1453 aa13.52□□□□□ -0.25
Pcdh9-201ENSMUST00000068992 Ccdc88bQ4QRL3 1481 aa13.48□□□□□ -0.25
Pcdh9-201ENSMUST00000068992 Cc2d2aQ8CFW7 1633 aa13.45□□□□□ -0.26
Pcdh9-201ENSMUST00000068992 Ehmt2Q9Z148 1263 aaKnown RBP13.43□□□□□ -0.26
Pcdh9-201ENSMUST00000068992 Supt5hO55201 1082 aaKnown RBP13.36□□□□□ -0.27
Pcdh9-201ENSMUST00000068992 Kdm5bQ80Y84 1544 aa13.3□□□□□ -0.28
Pcdh9-201ENSMUST00000068992 Cttnbp2B9EJA2 1648 aa13.26□□□□□ -0.29
Pcdh9-201ENSMUST00000068992 Neurod1Q60867 357 aa13.25□□□□□ -0.29
Pcdh9-201ENSMUST00000068992 Ccdc136Q3TVA9 1136 aa13.24□□□□□ -0.29
Pcdh9-201ENSMUST00000068992 Chic1Q8CBW7 227 aa13.24□□□□□ -0.29
Pcdh9-201ENSMUST00000068992 Golga3P55937 1487 aa13.21□□□□□ -0.29
Pcdh9-201ENSMUST00000068992 CftrP26361 1476 aa13.2□□□□□ -0.3
Pcdh9-201ENSMUST00000068992 Top2aQ01320 1528 aaKnown RBP13.2□□□□□ -0.3
Pcdh9-201ENSMUST00000068992 Rapgef2Q8CHG7 1496 aa13.18□□□□□ -0.3
Pcdh9-201ENSMUST00000068992 TnnQ80Z71 1560 aa13.16□□□□□ -0.3
Pcdh9-201ENSMUST00000068992 Unc13aQ4KUS2 1712 aa13.11□□□□□ -0.31
Pcdh9-201ENSMUST00000068992 Brd4Q9ESU6 1400 aaKnown RBP13.03□□□□□ -0.32
Pcdh9-201ENSMUST00000068992 Smarca4Q3TKT4 1613 aaKnown RBP13□□□□□ -0.33
Pcdh9-201ENSMUST00000068992 Ncapd3Q6ZQK0 1506 aa12.99□□□□□ -0.33
Pcdh9-201ENSMUST00000068992 Sall2Q9QX96 1004 aa12.96□□□□□ -0.33
Pcdh9-201ENSMUST00000068992 TchhA0A0B4J1F9 1599 aa12.95□□□□□ -0.34
Pcdh9-201ENSMUST00000068992 Mier1Q5UAK0 511 aa12.9□□□□□ -0.34
Pcdh9-201ENSMUST00000068992 Erich3F6QRE9 1637 aa12.88□□□□□ -0.35
Pcdh9-201ENSMUST00000068992 1700123L14RikQ3V2K7 440 aa12.87□□□□□ -0.35
Pcdh9-201ENSMUST00000068992 Aebp2Q9Z248 504 aaKnown RBP12.84□□□□□ -0.35
Pcdh9-201ENSMUST00000068992 Fmn1Q05860 1466 aa12.82□□□□□ -0.36
Pcdh9-201ENSMUST00000068992 Cep162Q6ZQ06 1403 aa12.8□□□□□ -0.36
Pcdh9-201ENSMUST00000068992 Iqgap2Q3UQ44 1575 aa12.8□□□□□ -0.36
Pcdh9-201ENSMUST00000068992 Lmo7E9PYF4 1699 aaKnown RBP12.79□□□□□ -0.36
Pcdh9-201ENSMUST00000068992 NrkQ9R0G8 1455 aa12.75□□□□□ -0.37
Pcdh9-201ENSMUST00000068992 Arhgap35Q91YM2 1499 aa12.75□□□□□ -0.37
Pcdh9-201ENSMUST00000068992 Arap1Q4LDD4 1452 aa12.75□□□□□ -0.37
Pcdh9-201ENSMUST00000068992 Anks4bQ8K3X6 423 aa12.74□□□□□ -0.37
Pcdh9-201ENSMUST00000068992 PtprkP35822 1457 aa12.74□□□□□ -0.37
Pcdh9-201ENSMUST00000068992 Camsap1A2AHC3 1581 aa12.71□□□□□ -0.38
Pcdh9-201ENSMUST00000068992 Csrnp3P59055 597 aa12.7□□□□□ -0.38
Pcdh9-201ENSMUST00000068992 Arhgef5E9Q7D5 1581 aa12.7□□□□□ -0.38
Pcdh9-201ENSMUST00000068992 Lamc3Q9R0B6 1581 aa12.69□□□□□ -0.38
Pcdh9-201ENSMUST00000068992 Cul7Q8VE73 1689 aa12.68□□□□□ -0.38
Pcdh9-201ENSMUST00000068992 Ankrd26Q811D2 1581 aa12.67□□□□□ -0.38
Pcdh9-201ENSMUST00000068992 Slx4Q6P1D7 1565 aa12.66□□□□□ -0.38
Pcdh9-201ENSMUST00000068992 Dennd4bQ3U1Y4 1499 aa12.66□□□□□ -0.38
Pcdh9-201ENSMUST00000068992 AqrQ8CFQ3 1481 aaKnown RBP12.63□□□□□ -0.39
Pcdh9-201ENSMUST00000068992 Tiam1Q60610 1591 aa12.61□□□□□ -0.39
Pcdh9-201ENSMUST00000068992 Cngb1E1AZ71 1325 aa12.61□□□□□ -0.39
Pcdh9-201ENSMUST00000068992 Rpap1Q80TE0 1409 aa12.6□□□□□ -0.39
Pcdh9-201ENSMUST00000068992 Wdr62Q3U3T8 1523 aa12.59□□□□□ -0.39
Pcdh9-201ENSMUST00000068992 Peg3Q3URU2 1571 aa12.58□□□□□ -0.4
Pcdh9-201ENSMUST00000068992 Disp1Q3TDN0 1521 aa12.57□□□□□ -0.4
Pcdh9-201ENSMUST00000068992 NefmP08553 848 aa12.57□□□□□ -0.4
Pcdh9-201ENSMUST00000068992 Pcf11G3X9Z4 1553 aa12.55□□□□□ -0.4
Pcdh9-201ENSMUST00000068992 Fhod3Q76LL6 1578 aa12.54□□□□□ -0.4
Pcdh9-201ENSMUST00000068992 Map3k1P53349 1493 aa12.52□□□□□ -0.41
Pcdh9-201ENSMUST00000068992 Pprc1Q6NZN1 1644 aa12.52□□□□□ -0.41
Pcdh9-201ENSMUST00000068992 Frmpd1A2AKB4 1549 aa12.52□□□□□ -0.41
Pcdh9-201ENSMUST00000068992 Setbp1Q9Z180 1582 aa12.51□□□□□ -0.41
Pcdh9-201ENSMUST00000068992 3425401B19RikD3Z1D3 1412 aa12.51□□□□□ -0.41
Pcdh9-201ENSMUST00000068992 Zeb1Q64318 1117 aa12.5□□□□□ -0.41
Pcdh9-201ENSMUST00000068992 Kif21bQ9QXL1 1668 aa12.47□□□□□ -0.41
Pcdh9-201ENSMUST00000068992 Gab3Q8BSM5 595 aa12.47□□□□□ -0.41
Pcdh9-201ENSMUST00000068992 Crocc2F6XLV1 1638 aa12.47□□□□□ -0.41
Pcdh9-201ENSMUST00000068992 Ccdc18Q640L5 1455 aa12.47□□□□□ -0.41
Pcdh9-201ENSMUST00000068992 Shroom4Q1W617 1475 aa12.46□□□□□ -0.42
Pcdh9-201ENSMUST00000068992 Thoc2B1AZI6 1594 aaKnown RBP12.44□□□□□ -0.42
Pcdh9-201ENSMUST00000068992 Setd1bQ8CFT2 1985 aa12.42□□□□□ -0.42
Pcdh9-201ENSMUST00000068992 Gpatch8A2A6A1 1505 aa12.41□□□□□ -0.42
Pcdh9-201ENSMUST00000068992 ClspnQ80YR7 1315 aa12.41□□□□□ -0.42
Pcdh9-201ENSMUST00000068992 Aplp2Q06335 707 aa12.4□□□□□ -0.42
Pcdh9-201ENSMUST00000068992 Naip1Q9QWK5 1403 aa12.4□□□□□ -0.42
Pcdh9-201ENSMUST00000068992 Atad2bE9Q166 1460 aaKnown RBP12.39□□□□□ -0.43
Pcdh9-201ENSMUST00000068992 Mroh2bQ7M6Y6 1581 aa12.39□□□□□ -0.43
Pcdh9-201ENSMUST00000068992 Cux1P53564 1515 aa12.39□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms