RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C GGA1Q06336 557 aa10.69□□□□□ -0.7
SSN3YPL042C PSR1Q07800 427 aa10.69□□□□□ -0.7
SSN3YPL042C NOP56Q12460 504 aaKnown RBP RIP-Chip data10.69□□□□□ -0.7not detected
SSN3YPL042C MATALPHA2P0CY08 210 aa10.68□□□□□ -0.7
SSN3YPL042C HMLALPHA2P0CY09 210 aa10.68□□□□□ -0.7
SSN3YPL042C SEC6P32844 805 aa10.68□□□□□ -0.7
SSN3YPL042C YHL050CP38721 697 aa10.68□□□□□ -0.7
SSN3YPL042C ATG20Q07528 640 aa10.68□□□□□ -0.7
SSN3YPL042C YOL098CQ12496 1037 aa10.68□□□□□ -0.7
SSN3YPL042C MRD1Q06106 887 aaKnown RBP10.67□□□□□ -0.7
SSN3YPL042C BIK1P11709 440 aa10.66□□□□□ -0.7
SSN3YPL042C CTF18P49956 741 aa10.66□□□□□ -0.7
SSN3YPL042C KEL2P50090 882 aa10.66□□□□□ -0.7
SSN3YPL042C YKE2P52553 114 aa10.66□□□□□ -0.7
SSN3YPL042C TAN1P53072 289 aaPredicted RBP10.66□□□□□ -0.7
SSN3YPL042C VTI1Q04338 217 aa10.66□□□□□ -0.7
SSN3YPL042C CRF1Q04930 467 aa10.66□□□□□ -0.7
SSN3YPL042C EST2Q06163 884 aa10.66□□□□□ -0.7
SSN3YPL042C YPL260WQ08977 551 aa10.66□□□□□ -0.7
SSN3YPL042C THS1P04801 734 aaKnown RBP10.66□□□□□ -0.7
SSN3YPL042C RPL17AP05740 184 aaKnown RBP10.66□□□□□ -0.7
SSN3YPL042C CLN1P20437 546 aa10.66□□□□□ -0.7
SSN3YPL042C CBF5P33322 483 aaKnown RBP RIP-Chip data10.66□□□□□ -0.7not detected
SSN3YPL042C YHL017WP38745 532 aa10.66□□□□□ -0.7
SSN3YPL042C FPK1P53739 893 aa10.66□□□□□ -0.7
SSN3YPL042C MYO3P36006 1272 aa10.65□□□□□ -0.7
SSN3YPL042C TTI1P36097 1038 aa10.65□□□□□ -0.7
SSN3YPL042C BDH2P39713 417 aa10.65□□□□□ -0.7
SSN3YPL042C TIM54P47045 478 aa10.65□□□□□ -0.7
SSN3YPL042C SQS1P53866 767 aaKnown RBP10.65□□□□□ -0.7
SSN3YPL042C HRQ1Q05549 1077 aa10.65□□□□□ -0.7
SSN3YPL042C NOP14Q99207 810 aaKnown RBP10.65□□□□□ -0.7
SSN3YPL042C CDC31P06704 161 aaKnown RBP10.64□□□□□ -0.71
SSN3YPL042C MSP1P28737 362 aa10.64□□□□□ -0.71
SSN3YPL042C CDC3P32457 520 aaKnown RBP10.64□□□□□ -0.71
SSN3YPL042C SNF7P39929 240 aaKnown RBP10.64□□□□□ -0.71
SSN3YPL042C YJL171CP46992 396 aa10.64□□□□□ -0.71
SSN3YPL042C ALG12P53730 551 aa10.64□□□□□ -0.71
SSN3YPL042C RRP9Q06506 573 aaKnown RBP10.64□□□□□ -0.71
SSN3YPL042C ROX1P25042 368 aa10.63□□□□□ -0.71
SSN3YPL042C DEP1P31385 405 aa10.63□□□□□ -0.71
SSN3YPL042C ANP1P32629 500 aa10.63□□□□□ -0.71
SSN3YPL042C PEX5P35056 612 aa10.63□□□□□ -0.71
SSN3YPL042C MSH4P40965 878 aaPredicted RBP10.63□□□□□ -0.71
SSN3YPL042C HST1P53685 503 aa10.63□□□□□ -0.71
SSN3YPL042C HDA1P53973 706 aa10.63□□□□□ -0.71
SSN3YPL042C YLR407WQ06070 228 aa10.63□□□□□ -0.71
SSN3YPL042C AVO1Q08236 1176 aa10.63□□□□□ -0.71
SSN3YPL042C ELG1Q12050 791 aa10.63□□□□□ -0.71
SSN3YPL042C RAD61Q99359 647 aa10.63□□□□□ -0.71
SSN3YPL042C GLC3P32775 704 aa10.63□□□□□ -0.71
SSN3YPL042C VID27P40157 782 aa10.63□□□□□ -0.71
SSN3YPL042C VPS70P47161 811 aa10.63□□□□□ -0.71
SSN3YPL042C UBP10P53874 792 aaPredicted RBP10.63□□□□□ -0.71
SSN3YPL042C TFC6Q06339 672 aa10.63□□□□□ -0.71
SSN3YPL042C KEL3Q08979 651 aaPredicted RBP10.63□□□□□ -0.71
SSN3YPL042C MAK16P10962 306 aaPredicted RBP10.62□□□□□ -0.71
SSN3YPL042C PRX1P34227 261 aaKnown RBP10.62□□□□□ -0.71
SSN3YPL042C STV1P37296 890 aa10.62□□□□□ -0.71
SSN3YPL042C PTK2P47116 818 aaKnown RBP10.62□□□□□ -0.71
SSN3YPL042C HAP5Q02516 242 aa10.62□□□□□ -0.71
SSN3YPL042C TRM44Q02648 567 aaKnown RBP10.62□□□□□ -0.71
SSN3YPL042C PCL8Q08966 492 aa10.62□□□□□ -0.71
SSN3YPL042C YPL150WQ12152 901 aa10.62□□□□□ -0.71
SSN3YPL042C CPA2P03965 1118 aaKnown RBP10.61□□□□□ -0.71
SSN3YPL042C LTV1P34078 463 aa10.61□□□□□ -0.71
SSN3YPL042C SAS3P34218 831 aa10.61□□□□□ -0.71
SSN3YPL042C UTP7P40055 554 aaKnown RBP10.61□□□□□ -0.71
SSN3YPL042C HYR1P40581 163 aaKnown RBP10.61□□□□□ -0.71
SSN3YPL042C GSC2P40989 1895 aa10.61□□□□□ -0.71
SSN3YPL042C ENT3P47160 408 aa10.61□□□□□ -0.71
SSN3YPL042C MTC3P53077 123 aa10.61□□□□□ -0.71
SSN3YPL042C PEX14P53112 341 aa10.61□□□□□ -0.71
SSN3YPL042C RUD3Q12234 484 aaKnown RBP10.61□□□□□ -0.71
SSN3YPL042C DBP10Q12389 995 aaKnown RBP10.61□□□□□ -0.71
SSN3YPL042C TPS3P38426 1054 aaKnown RBP10.6□□□□□ -0.71
SSN3YPL042C YMR124WP39523 943 aaKnown RBP10.6□□□□□ -0.71
SSN3YPL042C EPL1P43572 832 aa10.6□□□□□ -0.71
SSN3YPL042C RPL34AP87262 121 aaPredicted RBP10.6□□□□□ -0.71
SSN3YPL042C PFK2P16862 959 aaKnown RBP RIP-Chip data10.6□□□□□ -0.71not detected
SSN3YPL042C GAP1P19145 602 aaPredicted RBP10.6□□□□□ -0.71
SSN3YPL042C RIT1P23796 513 aa10.6□□□□□ -0.71
SSN3YPL042C PRO3P32263 286 aaKnown RBP10.6□□□□□ -0.71
SSN3YPL042C ABZ1P37254 787 aaPredicted RBP10.6□□□□□ -0.71
SSN3YPL042C BUD6P41697 788 aa10.6□□□□□ -0.71
SSN3YPL042C RPL17BP46990 184 aaKnown RBP10.6□□□□□ -0.71
SSN3YPL042C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.6□□□□□ -0.71not detected
SSN3YPL042C CIT2P08679 460 aa10.59□□□□□ -0.71
SSN3YPL042C MAK31P23059 88 aa10.59□□□□□ -0.71
SSN3YPL042C BIO2P32451 375 aa10.59□□□□□ -0.71
SSN3YPL042C SLI15P38283 698 aa10.59□□□□□ -0.71
SSN3YPL042C AKR1P39010 764 aa10.59□□□□□ -0.71
SSN3YPL042C TIM50Q02776 476 aa10.59□□□□□ -0.71
SSN3YPL042C SPO71Q03868 1245 aa10.59□□□□□ -0.71
SSN3YPL042C CLP1Q08685 445 aaPredicted RBP10.59□□□□□ -0.71
SSN3YPL042C SXM1Q04175 944 aaKnown RBP10.58□□□□□ -0.72
SSN3YPL042C RRP15Q06511 250 aaPredicted RBP10.58□□□□□ -0.72
SSN3YPL042C ISW2Q08773 1120 aa10.58□□□□□ -0.72
SSN3YPL042C NFI1Q12216 726 aa10.58□□□□□ -0.72
SSN3YPL042C RPC82P32349 654 aa10.57□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 109.2 ms