RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP1	YOR098C	UTR2	P32623	467 aa		6.32	□□□□□ -1.4
NUP1	YOR098C	MUM2	P38236	366 aa		6.32	□□□□□ -1.4
NUP1	YOR098C	HXT10	P43581	546 aa		6.32	□□□□□ -1.4
NUP1	YOR098C	BNA1	P47096	177 aa		6.32	□□□□□ -1.4
NUP1	YOR098C	MON1	P53129	644 aa		6.32	□□□□□ -1.4
NUP1	YOR098C	YLR225C	Q05948	407 aa	Known RBP	6.32	□□□□□ -1.4
NUP1	YOR098C	NUP170	P38181	1502 aa		6.32	□□□□□ -1.4
NUP1	YOR098C	PTP2	P29461	750 aa		6.32	□□□□□ -1.4
NUP1	YOR098C	PBY1	P38254	753 aa		6.32	□□□□□ -1.4
NUP1	YOR098C	NTA1	P40354	457 aa		6.32	□□□□□ -1.4
NUP1	YOR098C	YDL124W	Q07551	312 aa	Known RBP	6.32	□□□□□ -1.4
NUP1	YOR098C	BUD4	P47136	1447 aa		6.31	□□□□□ -1.4
NUP1	YOR098C	PTH2	P34222	208 aa		6.31	□□□□□ -1.4
NUP1	YOR098C	PSY2	P40164	858 aa		6.31	□□□□□ -1.4
NUP1	YOR098C	KXD1	P53158	218 aa		6.31	□□□□□ -1.4
NUP1	YOR098C	ALA1	P40825	983 aa	Known RBP	6.31	□□□□□ -1.4
NUP1	YOR098C	RRP6	Q12149	733 aa	Known RBP	6.31	□□□□□ -1.4
NUP1	YOR098C	AMN1	P38285	549 aa	Predicted RBP	6.31	□□□□□ -1.4
NUP1	YOR098C	NMD3	P38861	518 aa	Known RBP	6.31	□□□□□ -1.4
NUP1	YOR098C	RRP8	P38961	392 aa	Known RBP	6.31	□□□□□ -1.4
NUP1	YOR098C	REH1	Q06709	432 aa		6.31	□□□□□ -1.4
NUP1	YOR098C	MYO2	P19524	1574 aa	Known RBP	6.3	□□□□□ -1.4
NUP1	YOR098C	TAF1	P46677	1066 aa		6.3	□□□□□ -1.4
NUP1	YOR098C	GRC3	Q07845	632 aa		6.3	□□□□□ -1.4
NUP1	YOR098C	MDM12	Q92328	271 aa		6.3	□□□□□ -1.4
NUP1	YOR098C	CDC31	P06704	161 aa	Known RBP	6.3	□□□□□ -1.4
NUP1	YOR098C	IRS4	P36115	615 aa	Known RBP	6.3	□□□□□ -1.4
NUP1	YOR098C	DSS1	P39112	969 aa		6.3	□□□□□ -1.4
NUP1	YOR098C	MNT3	P40549	630 aa		6.3	□□□□□ -1.4
NUP1	YOR098C	HFD1	Q04458	532 aa		6.3	□□□□□ -1.4
NUP1	YOR098C	VIP1	Q06685	1146 aa	Known RBP	6.3	□□□□□ -1.4
NUP1	YOR098C	COB	P00163	385 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	MST1	P07236	462 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	MSN1	P22148	382 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	DBF20	P32328	564 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	6.29	□□□□□ -1.4	not detected
NUP1	YOR098C	PEX29	Q03370	554 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	MTQ2	Q03920	221 aa	Predicted RBP	6.29	□□□□□ -1.4
NUP1	YOR098C	NHA1	Q99271	985 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	SPP41	P38904	1435 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	SPT7	P35177	1332 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	STU1	P38198	1513 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	NIC96	P34077	839 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	SCD5	P34758	872 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	CAB3	P36076	571 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	SRB7	P47822	140 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	CTR9	P89105	1077 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	YPQ2	Q06328	317 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	SSP2	Q08646	371 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	THO2	P53552	1597 aa	Known RBP	6.29	□□□□□ -1.4
NUP1	YOR098C	SSM4	P40318	1319 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	EAP1	P36041	632 aa	Known RBP	6.29	□□□□□ -1.4
NUP1	YOR098C	KTR4	P38131	464 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	LDH1	P38139	375 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	MGS1	P40151	587 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	RSC8	P43609	557 aa	Known RBP	6.29	□□□□□ -1.4
NUP1	YOR098C	PSR2	Q07949	397 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	MSB4	Q12317	492 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	BPT1	P14772	1559 aa		6.29	□□□□□ -1.4
NUP1	YOR098C	TOP3	P13099	656 aa		6.28	□□□□□ -1.4
NUP1	YOR098C	LYP1	P32487	611 aa		6.28	□□□□□ -1.4
NUP1	YOR098C	EBP2	P36049	427 aa	Known RBP	6.28	□□□□□ -1.4
NUP1	YOR098C	SSK2	P53599	1579 aa		6.28	□□□□□ -1.4
NUP1	YOR098C	HOM3	P10869	527 aa		6.28	□□□□□ -1.4
NUP1	YOR098C	MCM10	P32354	571 aa		6.28	□□□□□ -1.4
NUP1	YOR098C	RER2	P35196	286 aa		6.28	□□□□□ -1.4
NUP1	YOR098C	HXT13	P39924	564 aa		6.28	□□□□□ -1.4
NUP1	YOR098C	RRD1	P40454	393 aa	Known RBP	6.28	□□□□□ -1.4
NUP1	YOR098C	MTR4	P47047	1073 aa	Known RBP	6.28	□□□□□ -1.4
NUP1	YOR098C	RSC1	P53236	928 aa		6.28	□□□□□ -1.4
NUP1	YOR098C	HXT17	P53631	564 aa		6.28	□□□□□ -1.4
NUP1	YOR098C	HXT15	P54854	567 aa		6.28	□□□□□ -1.4
NUP1	YOR098C	PML39	Q03760	334 aa		6.28	□□□□□ -1.4
NUP1	YOR098C	SXM1	Q04175	944 aa	Known RBP	6.28	□□□□□ -1.4
NUP1	YOR098C	CMR1	Q12510	522 aa	Known RBP	6.28	□□□□□ -1.4
NUP1	YOR098C	YGL015C	P33199	130 aa		6.27	□□□□□ -1.41
NUP1	YOR098C	MOT2	P34909	587 aa	Known RBP	6.27	□□□□□ -1.41
NUP1	YOR098C	YHL041W	P38730	149 aa		6.27	□□□□□ -1.41
NUP1	YOR098C	RIM4	P38741	713 aa		6.27	□□□□□ -1.41
NUP1	YOR098C	XDJ1	P39102	459 aa		6.27	□□□□□ -1.41
NUP1	YOR098C	ESL1	P40456	1118 aa		6.27	□□□□□ -1.41
NUP1	YOR098C	SIN3	P22579	1536 aa		6.27	□□□□□ -1.41
NUP1	YOR098C	PRP5	P21372	849 aa	Predicted RBP	6.27	□□□□□ -1.41
NUP1	YOR098C	VBA3	P25594	458 aa		6.27	□□□□□ -1.41
NUP1	YOR098C	DUR3	P33413	735 aa		6.27	□□□□□ -1.41
NUP1	YOR098C	APM2	P38700	605 aa		6.27	□□□□□ -1.41
NUP1	YOR098C	ISU1	Q03020	165 aa		6.27	□□□□□ -1.41
NUP1	YOR098C	HEH2	Q03281	663 aa		6.27	□□□□□ -1.41
NUP1	YOR098C	HDA2	Q06629	674 aa		6.27	□□□□□ -1.41
NUP1	YOR098C	YDR056C	Q12025	205 aa		6.27	□□□□□ -1.41
NUP1	YOR098C	MLC2	Q06580	163 aa		6.27	□□□□□ -1.41
NUP1	YOR098C	HBN1	Q96VH4	193 aa		6.27	□□□□□ -1.41
NUP1	YOR098C	MCM1	P11746	286 aa		6.26	□□□□□ -1.41
NUP1	YOR098C	DAT1	P13483	248 aa	Known RBP	6.26	□□□□□ -1.41
NUP1	YOR098C	MRF1	P30775	413 aa	Predicted RBP	6.26	□□□□□ -1.41
NUP1	YOR098C	SPT16	P32558	1035 aa	Known RBP	6.26	□□□□□ -1.41
NUP1	YOR098C	SAP185	P40856	1058 aa		6.26	□□□□□ -1.41
NUP1	YOR098C	NUT1	P53114	1132 aa		6.26	□□□□□ -1.41
NUP1	YOR098C	TSR2	Q06672	205 aa	Known RBP	6.26	□□□□□ -1.41
NUP1	YOR098C	PRP9	P19736	530 aa	Known RBP	6.26	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 51.7 ms