Protein–RNA interactions for Protein: P39112

DSS1, Exoribonuclease II, mitochondrial, yeastyeast

Predictions only

Length 969 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DSS1P39112 NSR1YGR159C 1245 nt19.36■□□□□ 0.69
DSS1P39112 YML009W-BYML009W-B 477 nt19.18■□□□□ 0.66
DSS1P39112 NOP1YDL014W 984 nt18.44■□□□□ 0.54
DSS1P39112 MDJ1YFL016C 1536 nt17.64■□□□□ 0.41
DSS1P39112 YKL036CYKL036C 393 nt16.78■□□□□ 0.28
DSS1P39112 YJL027CYJL027C 417 nt16.24■□□□□ 0.19
DSS1P39112 SRX1YKL086W 384 nt16.1■□□□□ 0.17
DSS1P39112 Q0297Q0297 156 nt15.98■□□□□ 0.15
DSS1P39112 DBP2YNL112W 1641 nt15.39■□□□□ 0.05
DSS1P39112 SCS3YGL126W 1143 nt15.36■□□□□ 0.05
DSS1P39112 YCR051WYCR051W 669 nt15.28■□□□□ 0.04
DSS1P39112 YBR190WYBR190W 312 nt15.12■□□□□ 0.01
DSS1P39112 TRN1tP(UGG)A 72 nt14.81□□□□□ -0.04
DSS1P39112 SUF9tP(UGG)F 72 nt14.81□□□□□ -0.04
DSS1P39112 SUF8tP(UGG)H 72 nt14.81□□□□□ -0.04
DSS1P39112 tP(UGG)LtP(UGG)L 72 nt14.81□□□□□ -0.04
DSS1P39112 SUF7tP(UGG)M 72 nt14.81□□□□□ -0.04
DSS1P39112 tP(UGG)N1tP(UGG)N1 72 nt14.81□□□□□ -0.04
DSS1P39112 tP(UGG)N2tP(UGG)N2 72 nt14.81□□□□□ -0.04
DSS1P39112 tP(UGG)O1tP(UGG)O1 72 nt14.81□□□□□ -0.04
DSS1P39112 SUF11tP(UGG)O2 72 nt14.81□□□□□ -0.04
DSS1P39112 RTC3YHR087W 336 nt14.81□□□□□ -0.04
DSS1P39112 CCC1YLR220W 969 nt14.7□□□□□ -0.06
DSS1P39112 YOL085CYOL085C 342 nt14.45□□□□□ -0.1
DSS1P39112 RVS167YDR388W 1449 nt14.42□□□□□ -0.1
DSS1P39112 RPP1BYDL130W 321 nt14.35□□□□□ -0.11
DSS1P39112 PKP1YIL042C 1185 nt14.27□□□□□ -0.13
DSS1P39112 SCJ1YMR214W 1134 nt14.25□□□□□ -0.13
DSS1P39112 SSA3YBL075C 1950 nt14.1□□□□□ -0.15
DSS1P39112 Q0182Q0182 405 nt14.09□□□□□ -0.15
DSS1P39112 PUT4YOR348C 1884 nt14.04□□□□□ -0.16
DSS1P39112 ATS1YAL020C 1002 nt13.88□□□□□ -0.19
DSS1P39112 tP(UGG)O3tP(UGG)O3 72 nt13.87□□□□□ -0.19
DSS1P39112 SHR5YOL110W 714 nt13.8□□□□□ -0.2
DSS1P39112 PET122YER153C 765 nt13.78□□□□□ -0.2
DSS1P39112 URN1YPR152C 1398 nt13.7□□□□□ -0.22
DSS1P39112 ARE1YCR048W 1833 nt13.66□□□□□ -0.22
DSS1P39112 MOT3YMR070W 1473 nt13.61□□□□□ -0.23
DSS1P39112 SAH1YER043C 1350 nt13.59□□□□□ -0.23
DSS1P39112 DEP1YAL013W 1218 nt13.59□□□□□ -0.23
DSS1P39112 POA1YBR022W 534 nt13.59□□□□□ -0.23
DSS1P39112 OPI9YLR338W 858 nt13.56□□□□□ -0.24
DSS1P39112 YHR049C-AYHR049C-A 297 nt13.53□□□□□ -0.24
DSS1P39112 SCR1SCR1 522 nt13.52□□□□□ -0.25
DSS1P39112 YDJ1YNL064C 1230 nt13.41□□□□□ -0.26
DSS1P39112 RPN10YHR200W 807 nt13.39□□□□□ -0.27
DSS1P39112 BSC6YOL137W 1494 nt13.38□□□□□ -0.27
DSS1P39112 RRN5YLR141W 1092 nt13.32□□□□□ -0.28
DSS1P39112 YNL208WYNL208W 600 nt13.29□□□□□ -0.28
DSS1P39112 GAR1YHR089C 618 nt13.21□□□□□ -0.29
DSS1P39112 BUD23YCR047C 828 nt13.2□□□□□ -0.3
DSS1P39112 PUN1YLR414C 792 nt13.17□□□□□ -0.3
DSS1P39112 PTC2YER089C 1395 nt13.08□□□□□ -0.31
DSS1P39112 YER088W-BYER088W-B 147 nt13.05□□□□□ -0.32
DSS1P39112 YJR018WYJR018W 363 nt13.03□□□□□ -0.32
DSS1P39112 SPT5YML010W 3192 nt12.96□□□□□ -0.33
DSS1P39112 NAB2YGL122C 1578 nt12.96□□□□□ -0.33
DSS1P39112 RSB1YOR049C 1065 nt12.96□□□□□ -0.33
DSS1P39112 TIR1YER011W 765 nt12.78□□□□□ -0.36
DSS1P39112 SSA4YER103W 1929 nt12.77□□□□□ -0.37
DSS1P39112 PST2YDR032C 597 nt12.74□□□□□ -0.37
DSS1P39112 FIS1YIL065C 468 nt12.74□□□□□ -0.37
DSS1P39112 YJR120WYJR120W 351 nt12.72□□□□□ -0.37
DSS1P39112 FPR4YLR449W 1179 nt12.72□□□□□ -0.37
DSS1P39112 DAL1YIR027C 1383 nt12.71□□□□□ -0.37
DSS1P39112 SSA1YAL005C 1929 nt12.7□□□□□ -0.38
DSS1P39112 RPP2BYDR382W 333 nt12.66□□□□□ -0.38
DSS1P39112 PHO4YFR034C 939 nt12.61□□□□□ -0.39
DSS1P39112 INM2YDR287W 879 nt12.6□□□□□ -0.39
DSS1P39112 MEP2YNL142W 1500 nt12.58□□□□□ -0.4
DSS1P39112 YKL097CYKL097C 411 nt12.54□□□□□ -0.4
DSS1P39112 YPS1YLR120C 1710 nt12.49□□□□□ -0.41
DSS1P39112 YBL100CYBL100C 315 nt12.44□□□□□ -0.42
DSS1P39112 YHR165W-AYHR165W-A 312 nt12.42□□□□□ -0.42
DSS1P39112 SRB2YHR041C 633 nt12.4□□□□□ -0.42
DSS1P39112 DCW1YKL046C 1350 nt12.4□□□□□ -0.42
DSS1P39112 YDR095CYDR095C 411 nt12.35□□□□□ -0.43
DSS1P39112 BDH2YAL061W 1254 nt12.32□□□□□ -0.44
DSS1P39112 BDF1YLR399C 2061 nt12.27□□□□□ -0.45
DSS1P39112 FUN26YAL022C 1554 nt12.26□□□□□ -0.45
DSS1P39112 EMI2YDR516C 1503 nt12.22□□□□□ -0.45
DSS1P39112 ALF1YNL148C 765 nt12.2□□□□□ -0.46
DSS1P39112 YMR090WYMR090W 684 nt12.18□□□□□ -0.46
DSS1P39112 TRM9YML014W 840 nt12.16□□□□□ -0.46
DSS1P39112 WWM1YFL010C 636 nt12.15□□□□□ -0.46
DSS1P39112 SHU1YHL006C 453 nt12.12□□□□□ -0.47
DSS1P39112 RPP2AYOL039W 321 nt12.12□□□□□ -0.47
DSS1P39112 TAT1YBR069C 1860 nt12.12□□□□□ -0.47
DSS1P39112 YBR220CYBR220C 1683 nt12.11□□□□□ -0.47
DSS1P39112 YDL221WYDL221W 552 nt12.09□□□□□ -0.47
DSS1P39112 PTP1YDL230W 1008 nt12.09□□□□□ -0.47
DSS1P39112 CAC2YML102W 1407 nt12.09□□□□□ -0.47
DSS1P39112 LSM3YLR438C-A 270 nt12.05□□□□□ -0.48
DSS1P39112 CCT6YDR188W 1641 nt12.04□□□□□ -0.48
DSS1P39112 SDH1YKL148C 1923 nt12.01□□□□□ -0.49
DSS1P39112 SUF2tP(AGG)C 72 nt11.99□□□□□ -0.49
DSS1P39112 SUF10tP(AGG)N 72 nt11.99□□□□□ -0.49
DSS1P39112 SIS1YNL007C 1059 nt11.98□□□□□ -0.49
DSS1P39112 YFL021C-AYFL021C-A 855 nt11.95□□□□□ -0.5
DSS1P39112 YGR021WYGR021W 873 nt11.95□□□□□ -0.5
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms