RNA–Protein interactions for RNA: YER161C

SPT2, Transcript of Protein involved in negative regulation of transcription, yeast

Gene SPT2, Length 1,002 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT2	YER161C	THI12	P42883	340 aa		4.68	□□□□□ -1.66
SPT2	YER161C	THI5	P43534	340 aa		4.68	□□□□□ -1.66
SPT2	YER161C	THI11	P47183	340 aa		4.68	□□□□□ -1.66
SPT2	YER161C	PEX13	P80667	386 aa		4.68	□□□□□ -1.66
SPT2	YER161C	YCS4	Q06156	1176 aa		4.68	□□□□□ -1.66
SPT2	YER161C	THI13	Q07748	340 aa		4.68	□□□□□ -1.66
SPT2	YER161C	AVO1	Q08236	1176 aa		4.68	□□□□□ -1.66
SPT2	YER161C	WHI5	Q12416	295 aa		4.68	□□□□□ -1.66
SPT2	YER161C	MET4	P32389	672 aa		4.67	□□□□□ -1.66
SPT2	YER161C	ARL1	P38116	183 aa	Known RBP	4.67	□□□□□ -1.66
SPT2	YER161C	POL32	P47110	350 aa		4.67	□□□□□ -1.66
SPT2	YER161C	PHO4	P07270	312 aa	Known RBP	4.66	□□□□□ -1.66
SPT2	YER161C	MSH3	P25336	1018 aa		4.66	□□□□□ -1.66
SPT2	YER161C	PRP40	P33203	583 aa	Known RBP	4.66	□□□□□ -1.66
SPT2	YER161C	NNK1	P36003	928 aa		4.66	□□□□□ -1.66
SPT2	YER161C	YKL077W	P36081	392 aa		4.66	□□□□□ -1.66
SPT2	YER161C	SPC42	P36094	363 aa		4.66	□□□□□ -1.66
SPT2	YER161C	AIM3	P38266	947 aa	Known RBP	4.66	□□□□□ -1.66
SPT2	YER161C	OCA5	P38738	679 aa		4.66	□□□□□ -1.66
SPT2	YER161C	PTC7	P38797	343 aa		4.66	□□□□□ -1.66
SPT2	YER161C	GTS1	P40956	396 aa		4.66	□□□□□ -1.66
SPT2	YER161C	SAM37	P50110	327 aa		4.66	□□□□□ -1.66
SPT2	YER161C	YNR063W	P53749	607 aa		4.66	□□□□□ -1.66
SPT2	YER161C	TPP1	Q03796	238 aa		4.66	□□□□□ -1.66
SPT2	YER161C	DAL4	Q04895	635 aa		4.66	□□□□□ -1.66
SPT2	YER161C	HEM13	P11353	328 aa	Known RBP	4.65	□□□□□ -1.67
SPT2	YER161C	XKS1	P42826	600 aa		4.65	□□□□□ -1.67
SPT2	YER161C	NNF1	P47149	201 aa		4.65	□□□□□ -1.67
SPT2	YER161C	RIM8	P53179	542 aa		4.65	□□□□□ -1.67
SPT2	YER161C	MRPL22	P53881	309 aa		4.65	□□□□□ -1.67
SPT2	YER161C	UTP5	Q04177	643 aa	Known RBP	4.65	□□□□□ -1.67
SPT2	YER161C	JIP5	Q06214	492 aa	Predicted RBP	4.65	□□□□□ -1.67
SPT2	YER161C	PUS7	Q08647	676 aa	Known RBP	4.65	□□□□□ -1.67
SPT2	YER161C	MSC6	Q08818	692 aa	Known RBP	4.65	□□□□□ -1.67
SPT2	YER161C	YDL177C	Q12257	170 aa		4.65	□□□□□ -1.67
SPT2	YER161C	FAA3	P39002	694 aa		4.64	□□□□□ -1.67
SPT2	YER161C	YAR028W	P39548	234 aa		4.64	□□□□□ -1.67
SPT2	YER161C	DAK2	P43550	591 aa		4.64	□□□□□ -1.67
SPT2	YER161C	ULP1	Q02724	621 aa		4.64	□□□□□ -1.67
SPT2	YER161C	NOG1	Q02892	647 aa	Known RBP	4.64	□□□□□ -1.67
SPT2	YER161C	YLR257W	Q06146	321 aa	Known RBP	4.64	□□□□□ -1.67
SPT2	YER161C	TOP1	P04786	769 aa		4.63	□□□□□ -1.67
SPT2	YER161C	ATE1	P16639	503 aa		4.63	□□□□□ -1.67
SPT2	YER161C	RET1	P22276	1149 aa	Known RBP	4.63	□□□□□ -1.67
SPT2	YER161C	CIC1	P38779	376 aa	Known RBP	4.63	□□□□□ -1.67
SPT2	YER161C	OYE2	Q03558	400 aa	Known RBP	4.63	□□□□□ -1.67
SPT2	YER161C	ETP1	P38748	585 aa	Known RBP	4.62	□□□□□ -1.67
SPT2	YER161C	RSM26	P47141	266 aa		4.62	□□□□□ -1.67
SPT2	YER161C	GIS1	Q03833	894 aa		4.62	□□□□□ -1.67
SPT2	YER161C	FPR4	Q06205	392 aa	Predicted RBP	4.62	□□□□□ -1.67
SPT2	YER161C	SOD2	P00447	233 aa		4.61	□□□□□ -1.67
SPT2	YER161C	PEX28	P38848	579 aa		4.61	□□□□□ -1.67
SPT2	YER161C	SVF1	Q05515	481 aa		4.61	□□□□□ -1.67
SPT2	YER161C	RSA3	Q05942	220 aa	Known RBP	4.61	□□□□□ -1.67
SPT2	YER161C	SAM35	P14693	329 aa		4.6	□□□□□ -1.67
SPT2	YER161C	PPG1	P32838	368 aa		4.6	□□□□□ -1.67
SPT2	YER161C	SEC8	P32855	1065 aa		4.6	□□□□□ -1.67
SPT2	YER161C	MTR4	P47047	1073 aa	Known RBP	4.6	□□□□□ -1.67
SPT2	YER161C	YJL045W	P47052	634 aa		4.6	□□□□□ -1.67
SPT2	YER161C	YJR008W	P47085	338 aa		4.6	□□□□□ -1.67
SPT2	YER161C	DOS2	P54858	310 aa		4.59	□□□□□ -1.67
SPT2	YER161C	GSF2	Q04697	403 aa	Known RBP	4.59	□□□□□ -1.67
SPT2	YER161C	RRP15	Q06511	250 aa	Predicted RBP	4.59	□□□□□ -1.67
SPT2	YER161C	RCL1	Q08096	367 aa	Predicted RBP	4.59	□□□□□ -1.67
SPT2	YER161C	VPS35	P34110	944 aa		4.58	□□□□□ -1.68
SPT2	YER161C	TOD6	P34219	525 aa		4.58	□□□□□ -1.68
SPT2	YER161C	SQT1	P35184	431 aa		4.58	□□□□□ -1.68
SPT2	YER161C	RDH54	P38086	958 aa		4.58	□□□□□ -1.68
SPT2	YER161C	MGE1	P38523	228 aa		4.58	□□□□□ -1.68
SPT2	YER161C	YHL012W	P38709	493 aa		4.58	□□□□□ -1.68
SPT2	YER161C	NMD2	P38798	1089 aa	Known RBP	4.58	□□□□□ -1.68
SPT2	YER161C	SHU2	P38957	223 aa		4.58	□□□□□ -1.68
SPT2	YER161C	PIC2	P40035	300 aa		4.58	□□□□□ -1.68
SPT2	YER161C	YGL140C	P53120	1219 aa		4.58	□□□□□ -1.68
SPT2	YER161C	RTS3	P53289	263 aa		4.58	□□□□□ -1.68
SPT2	YER161C	RNH70	P53331	553 aa		4.58	□□□□□ -1.68
SPT2	YER161C	YPL277C	Q08989	487 aa		4.58	□□□□□ -1.68
SPT2	YER161C	DED1	P06634	604 aa	Known RBP	4.57	□□□□□ -1.68
SPT2	YER161C	AFG2	P32794	780 aa		4.57	□□□□□ -1.68
SPT2	YER161C	RPT1	P33299	467 aa	Known RBP	4.57	□□□□□ -1.68
SPT2	YER161C	PPX1	P38698	397 aa		4.57	□□□□□ -1.68
SPT2	YER161C	GPB2	P39717	880 aa		4.57	□□□□□ -1.68
SPT2	YER161C	SNO2	P53823	222 aa		4.57	□□□□□ -1.68
SPT2	YER161C	YPL109C	Q02981	657 aa		4.57	□□□□□ -1.68
SPT2	YER161C	RPS13	P05756	151 aa	Known RBP	4.56	□□□□□ -1.68
SPT2	YER161C	SRP40	P32583	406 aa	Predicted RBP	4.56	□□□□□ -1.68
SPT2	YER161C	NUG1	P40010	520 aa	Known RBP	4.56	□□□□□ -1.68
SPT2	YER161C	FOL2	P51601	243 aa	Known RBP	4.56	□□□□□ -1.68
SPT2	YER161C	YOL098C	Q12496	1037 aa		4.56	□□□□□ -1.68
SPT2	YER161C	HXK1	P04806	485 aa	Known RBP	4.55	□□□□□ -1.68
SPT2	YER161C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
SPT2	YER161C	GCD6	P32501	712 aa	Known RBP	4.55	□□□□□ -1.68
SPT2	YER161C	AIM26	P32858	118 aa		4.55	□□□□□ -1.68
SPT2	YER161C	MDL2	P33311	773 aa		4.55	□□□□□ -1.68
SPT2	YER161C	QNS1	P38795	714 aa	Known RBP	4.55	□□□□□ -1.68
SPT2	YER161C	VAC8	P39968	578 aa		4.55	□□□□□ -1.68
SPT2	YER161C	ADI1	Q03677	179 aa		4.55	□□□□□ -1.68
SPT2	YER161C	CLU1	Q03690	1277 aa	Known RBP	4.55	□□□□□ -1.68
SPT2	YER161C	VMA4	P22203	233 aa	Known RBP	4.54	□□□□□ -1.68
SPT2	YER161C	YFL054C	P43549	646 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms