Protein–RNA interactions for Protein: P43549

YFL054C, Uncharacterized membrane protein YFL054C, yeastyeast

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YFL054CP43549 YML009W-BYML009W-B 477 nt16.56■□□□□ 0.24
YFL054CP43549 NSR1YGR159C 1245 nt16.53■□□□□ 0.24
YFL054CP43549 NOP1YDL014W 984 nt16.21■□□□□ 0.19
YFL054CP43549 YKL036CYKL036C 393 nt14.86□□□□□ -0.03
YFL054CP43549 MDJ1YFL016C 1536 nt14.56□□□□□ -0.08
YFL054CP43549 Q0297Q0297 156 nt14.09□□□□□ -0.15
YFL054CP43549 SRX1YKL086W 384 nt14.08□□□□□ -0.16
YFL054CP43549 YJL027CYJL027C 417 nt13.86□□□□□ -0.19
YFL054CP43549 SCS3YGL126W 1143 nt13.44□□□□□ -0.26
YFL054CP43549 YCR051WYCR051W 669 nt13.36□□□□□ -0.27
YFL054CP43549 Q0182Q0182 405 nt12.91□□□□□ -0.34
YFL054CP43549 DBP2YNL112W 1641 nt12.84□□□□□ -0.35
YFL054CP43549 YOL085CYOL085C 342 nt12.81□□□□□ -0.36
YFL054CP43549 MOT3YMR070W 1473 nt12.8□□□□□ -0.36
YFL054CP43549 TRN1tP(UGG)A 72 nt12.7□□□□□ -0.38
YFL054CP43549 SUF9tP(UGG)F 72 nt12.7□□□□□ -0.38
YFL054CP43549 SUF8tP(UGG)H 72 nt12.7□□□□□ -0.38
YFL054CP43549 tP(UGG)LtP(UGG)L 72 nt12.7□□□□□ -0.38
YFL054CP43549 SUF7tP(UGG)M 72 nt12.7□□□□□ -0.38
YFL054CP43549 tP(UGG)N1tP(UGG)N1 72 nt12.7□□□□□ -0.38
YFL054CP43549 tP(UGG)N2tP(UGG)N2 72 nt12.7□□□□□ -0.38
YFL054CP43549 tP(UGG)O1tP(UGG)O1 72 nt12.7□□□□□ -0.38
YFL054CP43549 SUF11tP(UGG)O2 72 nt12.7□□□□□ -0.38
YFL054CP43549 RPP1BYDL130W 321 nt12.65□□□□□ -0.38
YFL054CP43549 CCC1YLR220W 969 nt12.58□□□□□ -0.4
YFL054CP43549 PKP1YIL042C 1185 nt12.57□□□□□ -0.4
YFL054CP43549 YBR190WYBR190W 312 nt12.53□□□□□ -0.4
YFL054CP43549 RVS167YDR388W 1449 nt12.28□□□□□ -0.44
YFL054CP43549 SSA3YBL075C 1950 nt12.27□□□□□ -0.45
YFL054CP43549 RTC3YHR087W 336 nt12.26□□□□□ -0.45
YFL054CP43549 ATS1YAL020C 1002 nt12.03□□□□□ -0.48
YFL054CP43549 SCR1SCR1 522 nt12.03□□□□□ -0.48
YFL054CP43549 PET122YER153C 765 nt12.02□□□□□ -0.49
YFL054CP43549 tP(UGG)O3tP(UGG)O3 72 nt12.01□□□□□ -0.49
YFL054CP43549 SCJ1YMR214W 1134 nt12.01□□□□□ -0.49
YFL054CP43549 SHR5YOL110W 714 nt11.78□□□□□ -0.52
YFL054CP43549 RRN5YLR141W 1092 nt11.68□□□□□ -0.54
YFL054CP43549 YDJ1YNL064C 1230 nt11.67□□□□□ -0.54
YFL054CP43549 PUT4YOR348C 1884 nt11.53□□□□□ -0.56
YFL054CP43549 RSB1YOR049C 1065 nt11.49□□□□□ -0.57
YFL054CP43549 YER088W-BYER088W-B 147 nt11.45□□□□□ -0.58
YFL054CP43549 URN1YPR152C 1398 nt11.43□□□□□ -0.58
YFL054CP43549 RPN10YHR200W 807 nt11.38□□□□□ -0.59
YFL054CP43549 DEP1YAL013W 1218 nt11.37□□□□□ -0.59
YFL054CP43549 GAR1YHR089C 618 nt11.36□□□□□ -0.59
YFL054CP43549 OPI9YLR338W 858 nt11.28□□□□□ -0.6
YFL054CP43549 YNL208WYNL208W 600 nt11.28□□□□□ -0.6
YFL054CP43549 POA1YBR022W 534 nt11.19□□□□□ -0.62
YFL054CP43549 SAH1YER043C 1350 nt11.16□□□□□ -0.62
YFL054CP43549 ARE1YCR048W 1833 nt11.15□□□□□ -0.62
YFL054CP43549 PST2YDR032C 597 nt11.13□□□□□ -0.63
YFL054CP43549 YHR049C-AYHR049C-A 297 nt11.05□□□□□ -0.64
YFL054CP43549 NME1NME1 340 nt11.03□□□□□ -0.64
YFL054CP43549 BSC6YOL137W 1494 nt11.01□□□□□ -0.65
YFL054CP43549 PUN1YLR414C 792 nt11.01□□□□□ -0.65
YFL054CP43549 TIR1YER011W 765 nt11□□□□□ -0.65
YFL054CP43549 YJR018WYJR018W 363 nt10.93□□□□□ -0.66
YFL054CP43549 PTC2YER089C 1395 nt10.8□□□□□ -0.68
YFL054CP43549 SSA1YAL005C 1929 nt10.8□□□□□ -0.68
YFL054CP43549 SPT5YML010W 3192 nt10.8□□□□□ -0.68
YFL054CP43549 BUD23YCR047C 828 nt10.8□□□□□ -0.68
YFL054CP43549 RPP2BYDR382W 333 nt10.79□□□□□ -0.68
YFL054CP43549 YGR139WYGR139W 339 nt10.78□□□□□ -0.68
YFL054CP43549 SSA4YER103W 1929 nt10.76□□□□□ -0.69
YFL054CP43549 YKL097CYKL097C 411 nt10.73□□□□□ -0.69
YFL054CP43549 NAB2YGL122C 1578 nt10.71□□□□□ -0.69
YFL054CP43549 SHU1YHL006C 453 nt10.65□□□□□ -0.7
YFL054CP43549 INM2YDR287W 879 nt10.6□□□□□ -0.71
YFL054CP43549 YJR120WYJR120W 351 nt10.6□□□□□ -0.71
YFL054CP43549 DAL1YIR027C 1383 nt10.56□□□□□ -0.72
YFL054CP43549 YGR021WYGR021W 873 nt10.53□□□□□ -0.72
YFL054CP43549 FPR4YLR449W 1179 nt10.53□□□□□ -0.72
YFL054CP43549 SRB2YHR041C 633 nt10.49□□□□□ -0.73
YFL054CP43549 BDH2YAL061W 1254 nt10.49□□□□□ -0.73
YFL054CP43549 FIS1YIL065C 468 nt10.47□□□□□ -0.73
YFL054CP43549 WWM1YFL010C 636 nt10.46□□□□□ -0.73
YFL054CP43549 YAL037C-BYAL037C-B 975 nt10.46□□□□□ -0.73
YFL054CP43549 YBL100CYBL100C 315 nt10.44□□□□□ -0.74
YFL054CP43549 PHO4YFR034C 939 nt10.43□□□□□ -0.74
YFL054CP43549 FPS1YLL043W 2010 nt10.4□□□□□ -0.74
YFL054CP43549 LSM3YLR438C-A 270 nt10.4□□□□□ -0.74
YFL054CP43549 MEP2YNL142W 1500 nt10.39□□□□□ -0.75
YFL054CP43549 YFL021C-AYFL021C-A 855 nt10.38□□□□□ -0.75
YFL054CP43549 HOM6YJR139C 1080 nt10.38□□□□□ -0.75
YFL054CP43549 BDF1YLR399C 2061 nt10.36□□□□□ -0.75
YFL054CP43549 TRM9YML014W 840 nt10.34□□□□□ -0.75
YFL054CP43549 PAC11YDR488C 1602 nt10.31□□□□□ -0.76
YFL054CP43549 FUN26YAL022C 1554 nt10.3□□□□□ -0.76
YFL054CP43549 NVJ2YPR091C 2313 nt10.29□□□□□ -0.76
YFL054CP43549 MNP1YGL068W 585 nt10.27□□□□□ -0.77
YFL054CP43549 NPL3YDR432W 1245 nt10.25□□□□□ -0.77
YFL054CP43549 RKM5YLR137W 1104 nt10.24□□□□□ -0.77
YFL054CP43549 ALF1YNL148C 765 nt10.23□□□□□ -0.77
YFL054CP43549 YOL037CYOL037C 354 nt10.23□□□□□ -0.77
YFL054CP43549 DCW1YKL046C 1350 nt10.23□□□□□ -0.77
YFL054CP43549 YPS1YLR120C 1710 nt10.21□□□□□ -0.77
YFL054CP43549 TAT1YBR069C 1860 nt10.21□□□□□ -0.78
YFL054CP43549 SUF2tP(AGG)C 72 nt10.2□□□□□ -0.78
YFL054CP43549 SUF10tP(AGG)N 72 nt10.2□□□□□ -0.78
YFL054CP43549 YOR139CYOR139C 393 nt10.19□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 8.7 ms