RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	LSP1	Q12230	341 aa	Known RBP	1.78	□□□□□ -2.13
SSK2	YNR031C	DYN1	P36022	4092 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	SPE2	P21182	396 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	PRS1	P32895	427 aa	Known RBP	1.77	□□□□□ -2.13
SSK2	YNR031C	KSP1	P38691	1029 aa	Known RBP	1.77	□□□□□ -2.13
SSK2	YNR031C	ARP1	P38696	384 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	YPT35	P38815	214 aa	Known RBP	1.77	□□□□□ -2.13
SSK2	YNR031C	SSP1	P38871	571 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	RCM1	P53972	490 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	HEH2	Q03281	663 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	YML053C	Q04978	212 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	FPR4	Q06205	392 aa	Predicted RBP	1.77	□□□□□ -2.13
SSK2	YNR031C	RNA1	P11745	407 aa	Known RBP	1.77	□□□□□ -2.13
SSK2	YNR031C	TPM1	P17536	199 aa	Known RBP	1.77	□□□□□ -2.13
SSK2	YNR031C	FMO1	P38866	432 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	CSL4	P53859	292 aa	Predicted RBP	1.77	□□□□□ -2.13
SSK2	YNR031C	ADE16	P54113	591 aa	Known RBP	1.77	□□□□□ -2.13
SSK2	YNR031C	VPS72	Q03388	795 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	MTC5	Q03897	1148 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	STT4	P37297	1900 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	SRS2	P12954	1174 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	MIP1	P15801	1254 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	PPZ1	P26570	692 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	ARL1	P38116	183 aa	Known RBP	1.77	□□□□□ -2.13
SSK2	YNR031C	PPE1	P38796	400 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	FPR3	P38911	411 aa	Known RBP	1.77	□□□□□ -2.13
SSK2	YNR031C	SET4	P42948	560 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	CAF120	P53836	1060 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	KRE33	P53914	1056 aa	Known RBP	1.77	□□□□□ -2.13
SSK2	YNR031C	YNL058C	P53947	316 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	YNL035C	P53962	389 aa	Known RBP	1.77	□□□□□ -2.13
SSK2	YNR031C	RLF2	Q12495	606 aa		1.77	□□□□□ -2.13
SSK2	YNR031C	TLG1	Q03322	224 aa		1.76	□□□□□ -2.13
SSK2	YNR031C	GSF2	Q04697	403 aa	Known RBP	1.76	□□□□□ -2.13
SSK2	YNR031C	UTP13	Q05946	817 aa	Known RBP	1.76	□□□□□ -2.13
SSK2	YNR031C	PDI1	P17967	522 aa	Known RBP	1.76	□□□□□ -2.13
SSK2	YNR031C	BRN1	P38170	754 aa		1.76	□□□□□ -2.13
SSK2	YNR031C	PIL1	P53252	339 aa	Known RBP	1.76	□□□□□ -2.13
SSK2	YNR031C	RMD1	Q03441	430 aa		1.76	□□□□□ -2.13
SSK2	YNR031C	GPR1	Q12361	961 aa		1.76	□□□□□ -2.13
SSK2	YNR031C	ILV6	P25605	309 aa	Known RBP	1.76	□□□□□ -2.13
SSK2	YNR031C	MPE1	P35728	441 aa	Known RBP	1.76	□□□□□ -2.13
SSK2	YNR031C	NIT1	P40447	199 aa		1.76	□□□□□ -2.13
SSK2	YNR031C	ULI1	P43604	169 aa		1.76	□□□□□ -2.13
SSK2	YNR031C	YNL011C	P53980	444 aa		1.76	□□□□□ -2.13
SSK2	YNR031C	YOL036W	Q08206	761 aa		1.76	□□□□□ -2.13
SSK2	YNR031C	YRR1	Q12172	810 aa		1.76	□□□□□ -2.13
SSK2	YNR031C	SEC16	P48415	2195 aa	Known RBP	1.76	□□□□□ -2.13
SSK2	YNR031C	RPS19A	P07280	144 aa	Known RBP	1.76	□□□□□ -2.13
SSK2	YNR031C	RPS19B	P07281	144 aa	Predicted RBP	1.76	□□□□□ -2.13
SSK2	YNR031C	DIT2	P21595	489 aa		1.76	□□□□□ -2.13
SSK2	YNR031C	SAS4	Q04003	481 aa		1.76	□□□□□ -2.13
SSK2	YNR031C	CDC45	Q08032	650 aa		1.76	□□□□□ -2.13
SSK2	YNR031C	TRP5	P00931	707 aa	Known RBP	1.75	□□□□□ -2.13
SSK2	YNR031C	MAK16	P10962	306 aa	Predicted RBP	1.75	□□□□□ -2.13
SSK2	YNR031C	RPC82	P32349	654 aa		1.75	□□□□□ -2.13
SSK2	YNR031C	ASF1	P32447	279 aa		1.75	□□□□□ -2.13
SSK2	YNR031C	SPC42	P36094	363 aa		1.75	□□□□□ -2.13
SSK2	YNR031C	BFA1	P47113	574 aa		1.75	□□□□□ -2.13
SSK2	YNR031C	ROM1	P53046	1155 aa		1.75	□□□□□ -2.13
SSK2	YNR031C	UBP16	Q02863	499 aa		1.75	□□□□□ -2.13
SSK2	YNR031C	NOG1	Q02892	647 aa	Known RBP	1.75	□□□□□ -2.13
SSK2	YNR031C	GAS5	Q08193	484 aa		1.75	□□□□□ -2.13
SSK2	YNR031C	CFT2	Q12102	859 aa	Predicted RBP	1.75	□□□□□ -2.13
SSK2	YNR031C	CHO2	P05374	869 aa	Known RBP	1.75	□□□□□ -2.13
SSK2	YNR031C	PDR1	P12383	1068 aa		1.75	□□□□□ -2.13
SSK2	YNR031C	SEG2	P34250	1132 aa		1.75	□□□□□ -2.13
SSK2	YNR031C	PTI1	P39927	425 aa	Predicted RBP	1.75	□□□□□ -2.13
SSK2	YNR031C	PTK2	P47116	818 aa	Known RBP	1.75	□□□□□ -2.13
SSK2	YNR031C	KRS1	P15180	591 aa	Known RBP	1.75	□□□□□ -2.13
SSK2	YNR031C	YTA12	P40341	825 aa		1.75	□□□□□ -2.13
SSK2	YNR031C	YNL034W	P53963	612 aa		1.75	□□□□□ -2.13
SSK2	YNR031C	YNL018C	P53976	612 aa		1.75	□□□□□ -2.13
SSK2	YNR031C	YDR461C-A	Q2V2P7	80 aa		1.75	□□□□□ -2.13
SSK2	YNR031C	LAM4	P38800	1345 aa		1.75	□□□□□ -2.13
SSK2	YNR031C	SPB4	P25808	606 aa	Predicted RBP	1.75	□□□□□ -2.13
SSK2	YNR031C	SFP1	P32432	683 aa		1.75	□□□□□ -2.13
SSK2	YNR031C	BRL1	P38770	471 aa		1.75	□□□□□ -2.13
SSK2	YNR031C	SSF1	P38789	453 aa	Predicted RBP	1.75	□□□□□ -2.13
SSK2	YNR031C	YJL049W	P47048	450 aa		1.75	□□□□□ -2.13
SSK2	YNR031C	SVL3	Q03088	825 aa	Known RBP	1.75	□□□□□ -2.13
SSK2	YNR031C	CIR2	Q08822	631 aa		1.75	□□□□□ -2.13
SSK2	YNR031C	KGD2	P19262	463 aa	Predicted RBP	1.74	□□□□□ -2.13
SSK2	YNR031C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	1.74	□□□□□ -2.13	not detected
SSK2	YNR031C	OSM1	P21375	501 aa	Known RBP	1.74	□□□□□ -2.13
SSK2	YNR031C	NAR1	P23503	491 aa	Known RBP	1.74	□□□□□ -2.13
SSK2	YNR031C	NFU1	P32860	256 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	RPS0A	P32905	252 aa	Known RBP	1.74	□□□□□ -2.13
SSK2	YNR031C	MCD4	P36051	919 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	POA1	P38218	177 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	VAB2	P40003	282 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	RRP46	P53256	223 aa	Predicted RBP	1.74	□□□□□ -2.13
SSK2	YNR031C	COG8	Q04632	607 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	SDH5	Q08230	162 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	PUP3	P25451	205 aa	Known RBP	1.74	□□□□□ -2.13
SSK2	YNR031C	RAD51	P25454	400 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	UGA3	P26370	528 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	STV1	P37296	890 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	RGD1	P38339	666 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	DAN4	P47179	1161 aa		1.74	□□□□□ -2.13

Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms