RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W CIC1P38779 376 aaKnown RBP4.79□□□□□ -1.64
CTK3YML112W GCV1P48015 400 aa4.79□□□□□ -1.64
CTK3YML112W UTP22P53254 1237 aaPredicted RBP4.79□□□□□ -1.64
CTK3YML112W YAF9P53930 226 aa4.79□□□□□ -1.64
CTK3YML112W YCS4Q06156 1176 aa4.79□□□□□ -1.64
CTK3YML112W GIC2Q06648 383 aa4.79□□□□□ -1.64
CTK3YML112W YIG1Q08956 461 aa4.79□□□□□ -1.64
CTK3YML112W YOR223WQ12015 292 aa4.79□□□□□ -1.64
CTK3YML112W YGR130CP53278 816 aa4.78□□□□□ -1.64
CTK3YML112W MEC3Q02574 474 aa4.78□□□□□ -1.64
CTK3YML112W PHO4P07270 312 aaKnown RBP4.77□□□□□ -1.65
CTK3YML112W RNQ1P25367 405 aa4.77□□□□□ -1.65
CTK3YML112W VPS35P34110 944 aa4.77□□□□□ -1.65
CTK3YML112W PPX1P38698 397 aa4.77□□□□□ -1.65
CTK3YML112W DOT1Q04089 582 aaKnown RBP4.77□□□□□ -1.65
CTK3YML112W MSB1P21339 1137 aaKnown RBP4.76□□□□□ -1.65
CTK3YML112W MET4P32389 672 aa4.76□□□□□ -1.65
CTK3YML112W PUB1P32588 453 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
CTK3YML112W YKL077WP36081 392 aa4.76□□□□□ -1.65
CTK3YML112W GPT2P36148 743 aa4.76□□□□□ -1.65
CTK3YML112W REI1P38344 393 aaPredicted RBP4.76□□□□□ -1.65
CTK3YML112W THI12P42883 340 aa4.76□□□□□ -1.65
CTK3YML112W THI5P43534 340 aa4.76□□□□□ -1.65
CTK3YML112W SPO74P45819 413 aa4.76□□□□□ -1.65
CTK3YML112W THI11P47183 340 aa4.76□□□□□ -1.65
CTK3YML112W BRE4Q07660 1125 aa4.76□□□□□ -1.65
CTK3YML112W THI13Q07748 340 aa4.76□□□□□ -1.65
CTK3YML112W GCD6P32501 712 aaKnown RBP4.75□□□□□ -1.65
CTK3YML112W ALG6Q12001 544 aaKnown RBP4.75□□□□□ -1.65
CTK3YML112W WHI5Q12416 295 aa4.75□□□□□ -1.65
CTK3YML112W CYC7P00045 113 aa4.74□□□□□ -1.65
CTK3YML112W SEC20P28791 383 aa4.74□□□□□ -1.65
CTK3YML112W IPL1P38991 367 aa4.74□□□□□ -1.65
CTK3YML112W UBP5P39944 805 aa4.74□□□□□ -1.65
CTK3YML112W DAK2P43550 591 aa4.74□□□□□ -1.65
CTK3YML112W PRP40P33203 583 aaKnown RBP4.73□□□□□ -1.65
CTK3YML112W SLD2P34252 453 aa4.73□□□□□ -1.65
CTK3YML112W ARL1P38116 183 aaKnown RBP4.73□□□□□ -1.65
CTK3YML112W SHU2P38957 223 aa4.73□□□□□ -1.65
CTK3YML112W DAL4Q04895 635 aa4.73□□□□□ -1.65
CTK3YML112W OXR1Q08952 273 aa4.73□□□□□ -1.65
CTK3YML112W TY1A-LR4P0C2I8 440 aaKnown RBP4.72□□□□□ -1.65
CTK3YML112W TY1A-DR6P0CX70 440 aa4.72□□□□□ -1.65
CTK3YML112W TY1A-ER1P0CX71 440 aa4.72□□□□□ -1.65
CTK3YML112W TY1A-LR2P0CX72 440 aa4.72□□□□□ -1.65
CTK3YML112W TY1A-PLP0CX73 440 aa4.72□□□□□ -1.65
CTK3YML112W TY1A-JR1P0CX74 440 aa4.72□□□□□ -1.65
CTK3YML112W TY1A-LR3P0CX75 440 aa4.72□□□□□ -1.65
CTK3YML112W TY1A-ML2P0CX76 440 aa4.72□□□□□ -1.65
CTK3YML112W EXO5P38289 585 aa4.72□□□□□ -1.65
CTK3YML112W MMM1P41800 426 aa4.72□□□□□ -1.65
CTK3YML112W SLS1P42900 643 aa4.72□□□□□ -1.65
CTK3YML112W YGR045CP53229 120 aa4.72□□□□□ -1.65
CTK3YML112W SEN54Q02825 467 aaPredicted RBP4.72□□□□□ -1.65
CTK3YML112W NOG1Q02892 647 aaKnown RBP4.72□□□□□ -1.65
CTK3YML112W AVO1Q08236 1176 aa4.72□□□□□ -1.65
CTK3YML112W TY1A-GR1Q12085 440 aa4.72□□□□□ -1.65
CTK3YML112W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.72□□□□□ -1.65
CTK3YML112W TY1A-OLQ92392 440 aaKnown RBP4.72□□□□□ -1.65
CTK3YML112W RPS4AP0CX35 261 aaKnown RBP4.71□□□□□ -1.66
CTK3YML112W RPS4BP0CX36 261 aaKnown RBP4.71□□□□□ -1.66
CTK3YML112W KAR2P16474 682 aaKnown RBP4.71□□□□□ -1.66
CTK3YML112W UGA4P32837 571 aa4.71□□□□□ -1.66
CTK3YML112W WHI3P34761 661 aaKnown RBP4.71□□□□□ -1.66
CTK3YML112W MSH4P40965 878 aaPredicted RBP4.71□□□□□ -1.66
CTK3YML112W ELA1P53861 379 aaPredicted RBP4.71□□□□□ -1.66
CTK3YML112W PEX13P80667 386 aa4.71□□□□□ -1.66
CTK3YML112W MAG2Q06436 670 aaKnown RBP4.71□□□□□ -1.66
CTK3YML112W MSH3P25336 1018 aa4.7□□□□□ -1.66
CTK3YML112W CIT3P43635 486 aa4.7□□□□□ -1.66
CTK3YML112W ULP1Q02724 621 aa4.7□□□□□ -1.66
CTK3YML112W TOS4Q06266 489 aa4.7□□□□□ -1.66
CTK3YML112W RPT1P33299 467 aaKnown RBP4.69□□□□□ -1.66
CTK3YML112W NEM1P38757 446 aa4.69□□□□□ -1.66
CTK3YML112W RSM26P47141 266 aa4.69□□□□□ -1.66
CTK3YML112W RCM1P53972 490 aa4.69□□□□□ -1.66
CTK3YML112W YOR059CQ08448 450 aaKnown RBP4.69□□□□□ -1.66
CTK3YML112W GCD1P09032 578 aaPredicted RBP4.68□□□□□ -1.66
CTK3YML112W NFS1P25374 497 aa4.68□□□□□ -1.66
CTK3YML112W SQT1P35184 431 aa4.68□□□□□ -1.66
CTK3YML112W SEA4P38164 1038 aa4.68□□□□□ -1.66
CTK3YML112W MTR4P47047 1073 aaKnown RBP4.68□□□□□ -1.66
CTK3YML112W ALT1P52893 592 aa4.68□□□□□ -1.66
CTK3YML112W NSI1Q12457 570 aa4.68□□□□□ -1.66
CTK3YML112W NNK1P36003 928 aa4.67□□□□□ -1.66
CTK3YML112W PEX28P38848 579 aa4.67□□□□□ -1.66
CTK3YML112W SDH1Q00711 640 aa4.67□□□□□ -1.66
CTK3YML112W EAR1Q03212 550 aa4.67□□□□□ -1.66
CTK3YML112W ADI1Q03677 179 aa4.67□□□□□ -1.66
CTK3YML112W YML020WQ03722 664 aa4.67□□□□□ -1.66
CTK3YML112W GIS1Q03833 894 aa4.67□□□□□ -1.66
CTK3YML112W UTP5Q04177 643 aaKnown RBP4.67□□□□□ -1.66
CTK3YML112W VMA4P22203 233 aaKnown RBP4.66□□□□□ -1.66
CTK3YML112W YCR015CP25616 317 aa4.66□□□□□ -1.66
CTK3YML112W SMY2P32909 740 aaKnown RBP4.66□□□□□ -1.66
CTK3YML112W YPL109CQ02981 657 aa4.66□□□□□ -1.66
CTK3YML112W HXK1P04806 485 aaKnown RBP4.65□□□□□ -1.67
CTK3YML112W YKL222CP35995 705 aa4.65□□□□□ -1.67
CTK3YML112W FAA3P39002 694 aa4.65□□□□□ -1.67
CTK3YML112W YAR028WP39548 234 aa4.65□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 71.4 ms