Protein–RNA interactions for Protein: P42900

SLS1, Sigma-like sequence protein 1, mitochondrial, yeastyeast

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLS1P42900 NSR1YGR159C 1245 nt17.93■□□□□ 0.46
SLS1P42900 YML009W-BYML009W-B 477 nt17.78■□□□□ 0.44
SLS1P42900 NOP1YDL014W 984 nt17.16■□□□□ 0.34
SLS1P42900 MDJ1YFL016C 1536 nt16.19■□□□□ 0.18
SLS1P42900 YKL036CYKL036C 393 nt15.85■□□□□ 0.13
SLS1P42900 SRX1YKL086W 384 nt15□□□□□ -0.01
SLS1P42900 Q0297Q0297 156 nt14.93□□□□□ -0.02
SLS1P42900 YJL027CYJL027C 417 nt14.92□□□□□ -0.02
SLS1P42900 SCS3YGL126W 1143 nt14.45□□□□□ -0.1
SLS1P42900 DBP2YNL112W 1641 nt14.23□□□□□ -0.13
SLS1P42900 YCR051WYCR051W 669 nt14.2□□□□□ -0.14
SLS1P42900 YBR190WYBR190W 312 nt13.9□□□□□ -0.18
SLS1P42900 TRN1tP(UGG)A 72 nt13.74□□□□□ -0.21
SLS1P42900 SUF9tP(UGG)F 72 nt13.74□□□□□ -0.21
SLS1P42900 SUF8tP(UGG)H 72 nt13.74□□□□□ -0.21
SLS1P42900 tP(UGG)LtP(UGG)L 72 nt13.74□□□□□ -0.21
SLS1P42900 SUF7tP(UGG)M 72 nt13.74□□□□□ -0.21
SLS1P42900 tP(UGG)N1tP(UGG)N1 72 nt13.74□□□□□ -0.21
SLS1P42900 tP(UGG)N2tP(UGG)N2 72 nt13.74□□□□□ -0.21
SLS1P42900 tP(UGG)O1tP(UGG)O1 72 nt13.74□□□□□ -0.21
SLS1P42900 SUF11tP(UGG)O2 72 nt13.74□□□□□ -0.21
SLS1P42900 YOL085CYOL085C 342 nt13.67□□□□□ -0.22
SLS1P42900 CCC1YLR220W 969 nt13.59□□□□□ -0.23
SLS1P42900 RTC3YHR087W 336 nt13.56□□□□□ -0.24
SLS1P42900 Q0182Q0182 405 nt13.45□□□□□ -0.26
SLS1P42900 PKP1YIL042C 1185 nt13.42□□□□□ -0.26
SLS1P42900 RPP1BYDL130W 321 nt13.39□□□□□ -0.27
SLS1P42900 SSA3YBL075C 1950 nt13.37□□□□□ -0.27
SLS1P42900 RVS167YDR388W 1449 nt13.3□□□□□ -0.28
SLS1P42900 MOT3YMR070W 1473 nt13.26□□□□□ -0.29
SLS1P42900 SCJ1YMR214W 1134 nt13.17□□□□□ -0.3
SLS1P42900 ATS1YAL020C 1002 nt13.01□□□□□ -0.33
SLS1P42900 tP(UGG)O3tP(UGG)O3 72 nt12.89□□□□□ -0.35
SLS1P42900 PUT4YOR348C 1884 nt12.85□□□□□ -0.35
SLS1P42900 PET122YER153C 765 nt12.83□□□□□ -0.36
SLS1P42900 SCR1SCR1 522 nt12.76□□□□□ -0.37
SLS1P42900 SHR5YOL110W 714 nt12.76□□□□□ -0.37
SLS1P42900 URN1YPR152C 1398 nt12.6□□□□□ -0.39
SLS1P42900 ARE1YCR048W 1833 nt12.53□□□□□ -0.4
SLS1P42900 DEP1YAL013W 1218 nt12.5□□□□□ -0.41
SLS1P42900 OPI9YLR338W 858 nt12.48□□□□□ -0.41
SLS1P42900 YDJ1YNL064C 1230 nt12.48□□□□□ -0.41
SLS1P42900 SAH1YER043C 1350 nt12.47□□□□□ -0.41
SLS1P42900 RRN5YLR141W 1092 nt12.42□□□□□ -0.42
SLS1P42900 POA1YBR022W 534 nt12.42□□□□□ -0.42
SLS1P42900 YHR049C-AYHR049C-A 297 nt12.36□□□□□ -0.43
SLS1P42900 RPN10YHR200W 807 nt12.34□□□□□ -0.43
SLS1P42900 YNL208WYNL208W 600 nt12.27□□□□□ -0.45
SLS1P42900 GAR1YHR089C 618 nt12.24□□□□□ -0.45
SLS1P42900 RSB1YOR049C 1065 nt12.23□□□□□ -0.45
SLS1P42900 BSC6YOL137W 1494 nt12.21□□□□□ -0.46
SLS1P42900 YER088W-BYER088W-B 147 nt12.18□□□□□ -0.46
SLS1P42900 PUN1YLR414C 792 nt12.11□□□□□ -0.47
SLS1P42900 BUD23YCR047C 828 nt12.05□□□□□ -0.48
SLS1P42900 PTC2YER089C 1395 nt12.01□□□□□ -0.49
SLS1P42900 YJR018WYJR018W 363 nt12□□□□□ -0.49
SLS1P42900 PST2YDR032C 597 nt11.99□□□□□ -0.49
SLS1P42900 NAB2YGL122C 1578 nt11.9□□□□□ -0.5
SLS1P42900 SPT5YML010W 3192 nt11.87□□□□□ -0.51
SLS1P42900 TIR1YER011W 765 nt11.85□□□□□ -0.51
SLS1P42900 SSA1YAL005C 1929 nt11.78□□□□□ -0.52
SLS1P42900 YJR120WYJR120W 351 nt11.75□□□□□ -0.53
SLS1P42900 FIS1YIL065C 468 nt11.7□□□□□ -0.54
SLS1P42900 YKL097CYKL097C 411 nt11.69□□□□□ -0.54
SLS1P42900 DAL1YIR027C 1383 nt11.68□□□□□ -0.54
SLS1P42900 RPP2BYDR382W 333 nt11.67□□□□□ -0.54
SLS1P42900 FPR4YLR449W 1179 nt11.65□□□□□ -0.54
SLS1P42900 INM2YDR287W 879 nt11.6□□□□□ -0.55
SLS1P42900 NME1NME1 340 nt11.6□□□□□ -0.55
SLS1P42900 SSA4YER103W 1929 nt11.58□□□□□ -0.56
SLS1P42900 PHO4YFR034C 939 nt11.57□□□□□ -0.56
SLS1P42900 SRB2YHR041C 633 nt11.52□□□□□ -0.57
SLS1P42900 MEP2YNL142W 1500 nt11.49□□□□□ -0.57
SLS1P42900 YPS1YLR120C 1710 nt11.46□□□□□ -0.58
SLS1P42900 YBL100CYBL100C 315 nt11.45□□□□□ -0.58
SLS1P42900 YGR139WYGR139W 339 nt11.43□□□□□ -0.58
SLS1P42900 SHU1YHL006C 453 nt11.43□□□□□ -0.58
SLS1P42900 BDH2YAL061W 1254 nt11.4□□□□□ -0.58
SLS1P42900 PAC11YDR488C 1602 nt11.35□□□□□ -0.59
SLS1P42900 YHR165W-AYHR165W-A 312 nt11.35□□□□□ -0.59
SLS1P42900 YDR095CYDR095C 411 nt11.34□□□□□ -0.59
SLS1P42900 DCW1YKL046C 1350 nt11.3□□□□□ -0.6
SLS1P42900 FUN26YAL022C 1554 nt11.3□□□□□ -0.6
SLS1P42900 WWM1YFL010C 636 nt11.28□□□□□ -0.6
SLS1P42900 TRM9YML014W 840 nt11.23□□□□□ -0.61
SLS1P42900 ALF1YNL148C 765 nt11.2□□□□□ -0.62
SLS1P42900 YAL037C-BYAL037C-B 975 nt11.19□□□□□ -0.62
SLS1P42900 NVJ2YPR091C 2313 nt11.18□□□□□ -0.62
SLS1P42900 LSM3YLR438C-A 270 nt11.18□□□□□ -0.62
SLS1P42900 BDF1YLR399C 2061 nt11.16□□□□□ -0.62
SLS1P42900 EMI2YDR516C 1503 nt11.15□□□□□ -0.62
SLS1P42900 CCT6YDR188W 1641 nt11.13□□□□□ -0.63
SLS1P42900 YGR021WYGR021W 873 nt11.12□□□□□ -0.63
SLS1P42900 RPP2AYOL039W 321 nt11.12□□□□□ -0.63
SLS1P42900 PTP1YDL230W 1008 nt11.11□□□□□ -0.63
SLS1P42900 YFL021C-AYFL021C-A 855 nt11.1□□□□□ -0.63
SLS1P42900 YMR090WYMR090W 684 nt11.1□□□□□ -0.63
SLS1P42900 CAC2YML102W 1407 nt11.08□□□□□ -0.64
SLS1P42900 NPL3YDR432W 1245 nt11.07□□□□□ -0.64
SLS1P42900 HOM6YJR139C 1080 nt11.07□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 21.4 ms