RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT1YKL145W RPB10P22139 70 aa6.76□□□□□ -1.33
RPT1YKL145W PRP40P33203 583 aaKnown RBP6.76□□□□□ -1.33
RPT1YKL145W IXR1P33417 597 aa6.76□□□□□ -1.33
RPT1YKL145W NPL4P33755 580 aa6.76□□□□□ -1.33
RPT1YKL145W TAT2P38967 592 aa6.76□□□□□ -1.33
RPT1YKL145W UBP9P39967 754 aa6.76□□□□□ -1.33
RPT1YKL145W YJL181WP46987 611 aa6.76□□□□□ -1.33
RPT1YKL145W TY1A-JR2P47099 440 aa6.76□□□□□ -1.33
RPT1YKL145W UFD2P54860 961 aa6.76□□□□□ -1.33
RPT1YKL145W SRT1Q03175 343 aa6.76□□□□□ -1.33
RPT1YKL145W TY1A-DR1Q03856 440 aa6.76□□□□□ -1.33
RPT1YKL145W TY1A-ML1Q04706 440 aaKnown RBP6.76□□□□□ -1.33
RPT1YKL145W TY1A-BRQ12217 440 aa6.76□□□□□ -1.33
RPT1YKL145W TY1A-NL2Q12470 440 aa6.76□□□□□ -1.33
RPT1YKL145W TY1A-GR2Q12485 440 aa6.76□□□□□ -1.33
RPT1YKL145W TRP5P00931 707 aaKnown RBP6.75□□□□□ -1.33
RPT1YKL145W RAD4P14736 754 aa6.75□□□□□ -1.33
RPT1YKL145W GCD6P32501 712 aaKnown RBP6.75□□□□□ -1.33
RPT1YKL145W PEP7P32609 515 aa6.75□□□□□ -1.33
RPT1YKL145W MNR2P35724 969 aa6.75□□□□□ -1.33
RPT1YKL145W YBR197CP38306 217 aa6.75□□□□□ -1.33
RPT1YKL145W YIL092WP40497 633 aa6.75□□□□□ -1.33
RPT1YKL145W CWH41P53008 833 aa6.75□□□□□ -1.33
RPT1YKL145W MTO1P53070 669 aa6.75□□□□□ -1.33
RPT1YKL145W NMA111P53920 997 aa6.75□□□□□ -1.33
RPT1YKL145W ISR1Q06098 443 aaKnown RBP6.75□□□□□ -1.33
RPT1YKL145W LYS2P07702 1392 aa6.75□□□□□ -1.33
RPT1YKL145W RAD2P07276 1031 aa6.74□□□□□ -1.33
RPT1YKL145W PDR1P12383 1068 aa6.74□□□□□ -1.33
RPT1YKL145W CYC8P14922 966 aa6.74□□□□□ -1.33
RPT1YKL145W ISC10P32645 267 aa6.74□□□□□ -1.33
RPT1YKL145W NGR1P32831 672 aaKnown RBP6.74□□□□□ -1.33
RPT1YKL145W EAP1P36041 632 aaKnown RBP6.74□□□□□ -1.33
RPT1YKL145W NPR2P39923 615 aa6.74□□□□□ -1.33
RPT1YKL145W YGR122WP53272 402 aa6.74□□□□□ -1.33
RPT1YKL145W ZDS2P54786 942 aa6.74□□□□□ -1.33
RPT1YKL145W RMT2Q03305 412 aa6.74□□□□□ -1.33
RPT1YKL145W VPS72Q03388 795 aa6.74□□□□□ -1.33
RPT1YKL145W HDA3Q06623 655 aa6.74□□□□□ -1.33
RPT1YKL145W CYT1P07143 309 aa6.73□□□□□ -1.33
RPT1YKL145W SEC2P17065 759 aa6.73□□□□□ -1.33
RPT1YKL145W KTR2P33550 425 aa6.73□□□□□ -1.33
RPT1YKL145W PET112P33893 541 aa6.73□□□□□ -1.33
RPT1YKL145W VPS35P34110 944 aa6.73□□□□□ -1.33
RPT1YKL145W PML39Q03760 334 aa6.73□□□□□ -1.33
RPT1YKL145W YOR131CQ12486 218 aa6.73□□□□□ -1.33
RPT1YKL145W GRX1P25373 110 aaKnown RBP6.72□□□□□ -1.33
RPT1YKL145W VAC17P25591 423 aa6.72□□□□□ -1.33
RPT1YKL145W MNN1P39106 762 aa6.72□□□□□ -1.33
RPT1YKL145W PEX29Q03370 554 aa6.72□□□□□ -1.33
RPT1YKL145W YOL057WQ08225 711 aa6.72□□□□□ -1.33
RPT1YKL145W PPM2Q08282 695 aa6.72□□□□□ -1.33
RPT1YKL145W PAC1P39946 494 aaKnown RBP6.71□□□□□ -1.34
RPT1YKL145W YJR142WP47173 342 aa6.71□□□□□ -1.34
RPT1YKL145W YGL081WP53156 320 aa6.71□□□□□ -1.34
RPT1YKL145W TOS4Q06266 489 aa6.71□□□□□ -1.34
RPT1YKL145W RPS6AP0CX37 236 aaKnown RBP6.7□□□□□ -1.34
RPT1YKL145W RPS6BP0CX38 236 aaPredicted RBP6.7□□□□□ -1.34
RPT1YKL145W BUD27P43573 796 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
RPT1YKL145W HUL5P53119 910 aa6.7□□□□□ -1.34
RPT1YKL145W CDC55Q00362 526 aa6.7□□□□□ -1.34
RPT1YKL145W VPS64Q03944 604 aa6.7□□□□□ -1.34
RPT1YKL145W BDS1Q08347 646 aa6.7□□□□□ -1.34
RPT1YKL145W YGR161W-CQ3E744 92 aa6.7□□□□□ -1.34
RPT1YKL145W MRP7P12687 371 aa6.69□□□□□ -1.34
RPT1YKL145W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
RPT1YKL145W LYS4P49367 693 aaPredicted RBP6.69□□□□□ -1.34
RPT1YKL145W CWC24P53769 259 aa6.69□□□□□ -1.34
RPT1YKL145W CSI1Q04368 295 aa6.69□□□□□ -1.34
RPT1YKL145W MET6P05694 767 aaKnown RBP6.68□□□□□ -1.34
RPT1YKL145W GCD11P32481 527 aaKnown RBP6.68□□□□□ -1.34
RPT1YKL145W RAD24P32641 659 aa6.68□□□□□ -1.34
RPT1YKL145W APL2P36000 726 aaPredicted RBP6.68□□□□□ -1.34
RPT1YKL145W NUP82P40368 713 aa6.68□□□□□ -1.34
RPT1YKL145W TPM2P40414 161 aa6.68□□□□□ -1.34
RPT1YKL145W TPO2P53283 614 aa6.68□□□□□ -1.34
RPT1YKL145W HXK1P04806 485 aaKnown RBP6.67□□□□□ -1.34
RPT1YKL145W NOP2P40991 618 aaKnown RBP6.67□□□□□ -1.34
RPT1YKL145W SAM37P50110 327 aa6.67□□□□□ -1.34
RPT1YKL145W KXD1P53158 218 aa6.67□□□□□ -1.34
RPT1YKL145W YNL011CP53980 444 aa6.67□□□□□ -1.34
RPT1YKL145W YDR306CQ06640 478 aa6.67□□□□□ -1.34
RPT1YKL145W SSP2Q08646 371 aa6.67□□□□□ -1.34
RPT1YKL145W UTP10P42945 1769 aaKnown RBP6.67□□□□□ -1.34
RPT1YKL145W SWI5P08153 709 aa6.67□□□□□ -1.34
RPT1YKL145W SWC3P31376 625 aa6.67□□□□□ -1.34
RPT1YKL145W NUP133P36161 1157 aa6.67□□□□□ -1.34
RPT1YKL145W FAA3P39002 694 aa6.67□□□□□ -1.34
RPT1YKL145W UBP12P39538 1254 aa6.67□□□□□ -1.34
RPT1YKL145W HXT10P43581 546 aa6.67□□□□□ -1.34
RPT1YKL145W YFR016CP43597 1233 aaKnown RBP6.67□□□□□ -1.34
RPT1YKL145W YGL082WP53155 381 aa6.67□□□□□ -1.34
RPT1YKL145W DNM1P54861 757 aa6.67□□□□□ -1.34
RPT1YKL145W OXR1Q08952 273 aa6.67□□□□□ -1.34
RPT1YKL145W WSC3Q12215 556 aa6.67□□□□□ -1.34
RPT1YKL145W SWI1P09547 1314 aa6.66□□□□□ -1.34
RPT1YKL145W CIC1P38779 376 aaKnown RBP6.66□□□□□ -1.34
RPT1YKL145W FAA4P47912 694 aaKnown RBP6.66□□□□□ -1.34
RPT1YKL145W UTP14Q04500 899 aaKnown RBP6.66□□□□□ -1.34
RPT1YKL145W ATG20Q07528 640 aa6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms