RNA–Protein interactions for RNA: YEL060C

PRB1, Transcript of Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity, yeast

Gene PRB1, Length 1,908 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRB1	YEL060C	EFM4	P40516	257 aa		8	□□□□□ -1.13
PRB1	YEL060C	TRS85	P46944	698 aa		8	□□□□□ -1.13
PRB1	YEL060C	FYV8	P46949	817 aa	Known RBP	8	□□□□□ -1.13
PRB1	YEL060C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	8	□□□□□ -1.13	not detected
PRB1	YEL060C	CUE3	P53137	624 aa	Known RBP	8	□□□□□ -1.13
PRB1	YEL060C	HOT1	Q03213	719 aa		8	□□□□□ -1.13
PRB1	YEL060C	LAM6	Q08001	693 aa		8	□□□□□ -1.13
PRB1	YEL060C	DCS2	Q12123	353 aa		8	□□□□□ -1.13
PRB1	YEL060C	SEC14	P24280	304 aa	Known RBP	7.99	□□□□□ -1.13
PRB1	YEL060C	ATG3	P40344	310 aa		7.99	□□□□□ -1.13
PRB1	YEL060C	TAN1	P53072	289 aa	Predicted RBP	7.99	□□□□□ -1.13
PRB1	YEL060C	RMP1	Q12530	201 aa		7.99	□□□□□ -1.13
PRB1	YEL060C	MPH3	P0CE00	602 aa		7.99	□□□□□ -1.13
PRB1	YEL060C	RPS6A	P0CX37	236 aa	Known RBP	7.99	□□□□□ -1.13
PRB1	YEL060C	RPS6B	P0CX38	236 aa	Predicted RBP	7.99	□□□□□ -1.13
PRB1	YEL060C	MTF2	P10849	440 aa		7.99	□□□□□ -1.13
PRB1	YEL060C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	7.99	□□□□□ -1.13	not detected
PRB1	YEL060C	HCA4	P20448	770 aa	Known RBP	7.99	□□□□□ -1.13
PRB1	YEL060C	RAD53	P22216	821 aa		7.99	□□□□□ -1.13
PRB1	YEL060C	URA1	P28272	314 aa	Predicted RBP	7.99	□□□□□ -1.13
PRB1	YEL060C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	7.99	□□□□□ -1.13	not detected
PRB1	YEL060C	YET1	P35723	206 aa		7.99	□□□□□ -1.13
PRB1	YEL060C	ISW1	P38144	1129 aa		7.99	□□□□□ -1.13
PRB1	YEL060C	FAR11	P53917	953 aa		7.99	□□□□□ -1.13
PRB1	YEL060C	ALD3	P54114	506 aa		7.99	□□□□□ -1.13
PRB1	YEL060C	SMC6	Q12749	1114 aa		7.99	□□□□□ -1.13
PRB1	YEL060C	LAM4	P38800	1345 aa		7.99	□□□□□ -1.13
PRB1	YEL060C	PMR1	P13586	950 aa		7.98	□□□□□ -1.13
PRB1	YEL060C	CTM1	P38818	585 aa		7.98	□□□□□ -1.13
PRB1	YEL060C	TIF4632	P39936	914 aa	Known RBP	7.98	□□□□□ -1.13
PRB1	YEL060C	SHQ1	P40486	507 aa	Predicted RBP	7.98	□□□□□ -1.13
PRB1	YEL060C	RTS3	P53289	263 aa		7.98	□□□□□ -1.13
PRB1	YEL060C	PKH3	Q03306	898 aa	Predicted RBP	7.98	□□□□□ -1.13
PRB1	YEL060C	EIS1	Q05050	843 aa	Known RBP	7.98	□□□□□ -1.13
PRB1	YEL060C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	7.98	□□□□□ -1.13	not detected
PRB1	YEL060C	CDC8	P00572	216 aa		7.97	□□□□□ -1.13
PRB1	YEL060C	CDC37	P06101	506 aa	Known RBP	7.97	□□□□□ -1.13
PRB1	YEL060C	SRB4	P32569	687 aa		7.97	□□□□□ -1.13
PRB1	YEL060C	RPN10	P38886	268 aa	Known RBP	7.97	□□□□□ -1.13
PRB1	YEL060C	VPS30	Q02948	557 aa		7.97	□□□□□ -1.13
PRB1	YEL060C	MDM38	Q08179	573 aa		7.97	□□□□□ -1.13
PRB1	YEL060C	RRP6	Q12149	733 aa	Known RBP	7.97	□□□□□ -1.13
PRB1	YEL060C	SAC3	P46674	1301 aa		7.97	□□□□□ -1.13
PRB1	YEL060C	PRP5	P21372	849 aa	Predicted RBP	7.97	□□□□□ -1.13
PRB1	YEL060C	PXA1	P41909	870 aa		7.97	□□□□□ -1.13
PRB1	YEL060C	XKS1	P42826	600 aa		7.97	□□□□□ -1.13
PRB1	YEL060C	NGL3	Q03210	505 aa		7.97	□□□□□ -1.13
PRB1	YEL060C	SSF2	Q12153	453 aa	Predicted RBP	7.97	□□□□□ -1.13
PRB1	YEL060C	SEC18	P18759	758 aa	Known RBP	7.96	□□□□□ -1.13
PRB1	YEL060C	SPO11	P23179	398 aa		7.96	□□□□□ -1.13
PRB1	YEL060C	RAD51	P25454	400 aa		7.96	□□□□□ -1.13
PRB1	YEL060C	PAP1	P29468	568 aa	Known RBP	7.96	□□□□□ -1.13
PRB1	YEL060C	PDB1	P32473	366 aa	Known RBP	7.96	□□□□□ -1.13
PRB1	YEL060C	APL2	P36000	726 aa	Predicted RBP	7.96	□□□□□ -1.13
PRB1	YEL060C	MRX1	P40050	688 aa		7.96	□□□□□ -1.13
PRB1	YEL060C	YMR147W	P40218	223 aa	Known RBP	7.96	□□□□□ -1.13
PRB1	YEL060C	YJR142W	P47173	342 aa		7.96	□□□□□ -1.13
PRB1	YEL060C	NNF2	P53253	936 aa		7.96	□□□□□ -1.13
PRB1	YEL060C	MTC5	Q03897	1148 aa		7.96	□□□□□ -1.13
PRB1	YEL060C	UTP5	Q04177	643 aa	Known RBP	7.96	□□□□□ -1.13
PRB1	YEL060C	YLR287C	Q05881	355 aa		7.96	□□□□□ -1.13
PRB1	YEL060C	UTP10	P42945	1769 aa	Known RBP	7.95	□□□□□ -1.14
PRB1	YEL060C	SUP35	P05453	685 aa	Known RBP	7.95	□□□□□ -1.14
PRB1	YEL060C	SPO12	P17123	173 aa		7.95	□□□□□ -1.14
PRB1	YEL060C	RAD57	P25301	460 aa		7.95	□□□□□ -1.14
PRB1	YEL060C	BMH1	P29311	267 aa	Known RBP	7.95	□□□□□ -1.14
PRB1	YEL060C	MSB3	P48566	633 aa	Predicted RBP	7.95	□□□□□ -1.14
PRB1	YEL060C	YGR237C	P50089	785 aa		7.95	□□□□□ -1.14
PRB1	YEL060C	YNL193W	P53870	558 aa		7.95	□□□□□ -1.14
PRB1	YEL060C	LCB5	Q06147	687 aa	Known RBP	7.95	□□□□□ -1.14
PRB1	YEL060C	YLR271W	Q06152	274 aa		7.95	□□□□□ -1.14
PRB1	YEL060C	EST2	Q06163	884 aa		7.95	□□□□□ -1.14
PRB1	YEL060C	CMS1	Q07897	291 aa	Known RBP	7.95	□□□□□ -1.14
PRB1	YEL060C	JIP3	O13555	125 aa		7.95	□□□□□ -1.14
PRB1	YEL060C	CDC6	P09119	513 aa		7.95	□□□□□ -1.14
PRB1	YEL060C	KRS1	P15180	591 aa	Known RBP	7.95	□□□□□ -1.14
PRB1	YEL060C	YKR018C	P36114	725 aa		7.95	□□□□□ -1.14
PRB1	YEL060C	MET1	P36150	593 aa		7.95	□□□□□ -1.14
PRB1	YEL060C	CRG1	P38892	291 aa	RIP-Chip data	7.95	□□□□□ -1.14	not detected
PRB1	YEL060C	GET3	Q12154	354 aa	Known RBP	7.95	□□□□□ -1.14
PRB1	YEL060C	RSF2	P46974	1380 aa		7.95	□□□□□ -1.14
PRB1	YEL060C	GAL11	P19659	1081 aa		7.94	□□□□□ -1.14
PRB1	YEL060C	CKI1	P20485	582 aa		7.94	□□□□□ -1.14
PRB1	YEL060C	ARG1	P22768	420 aa		7.94	□□□□□ -1.14
PRB1	YEL060C	AKR1	P39010	764 aa		7.94	□□□□□ -1.14
PRB1	YEL060C	SEC26	P41810	973 aa	Known RBP	7.94	□□□□□ -1.14
PRB1	YEL060C	ILM1	P47155	203 aa		7.94	□□□□□ -1.14
PRB1	YEL060C	ALD2	P47771	506 aa		7.94	□□□□□ -1.14
PRB1	YEL060C	NCS2	P53923	493 aa	Predicted RBP	7.94	□□□□□ -1.14
PRB1	YEL060C	PKH1	Q03407	766 aa		7.94	□□□□□ -1.14
PRB1	YEL060C	EBS1	Q03466	884 aa	Known RBP	7.94	□□□□□ -1.14
PRB1	YEL060C	SPN1	Q06505	410 aa	Predicted RBP	7.94	□□□□□ -1.14
PRB1	YEL060C	NEW1	Q08972	1196 aa	Known RBP	7.94	□□□□□ -1.14
PRB1	YEL060C	MRPS28	P21771	286 aa		7.93	□□□□□ -1.14
PRB1	YEL060C	SWI4	P25302	1093 aa	Known RBP	7.93	□□□□□ -1.14
PRB1	YEL060C	RPS0A	P32905	252 aa	Known RBP	7.93	□□□□□ -1.14
PRB1	YEL060C	MIP6	P38760	659 aa	Known RBP	7.93	□□□□□ -1.14
PRB1	YEL060C	UBP16	Q02863	499 aa		7.93	□□□□□ -1.14
PRB1	YEL060C	FCP1	Q03254	732 aa		7.93	□□□□□ -1.14
PRB1	YEL060C	YPR204W	Q08995	1032 aa		7.93	□□□□□ -1.14

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms