RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	HUL4	P40985	892 aa		6.45	□□□□□ -1.38
LCB2	YDR062W	PFD1	P46988	109 aa		6.45	□□□□□ -1.38
LCB2	YDR062W	GNP1	P48813	663 aa		6.45	□□□□□ -1.38
LCB2	YDR062W	TFB2	Q02939	513 aa		6.45	□□□□□ -1.38
LCB2	YDR062W	MSH6	Q03834	1242 aa		6.45	□□□□□ -1.38
LCB2	YDR062W	SPO20	Q04359	397 aa		6.45	□□□□□ -1.38
LCB2	YDR062W	TMA64	Q04600	565 aa	Known RBP	6.45	□□□□□ -1.38
LCB2	YDR062W	PUS5	Q06244	254 aa		6.45	□□□□□ -1.38
LCB2	YDR062W	ATG13	Q06628	738 aa		6.45	□□□□□ -1.38
LCB2	YDR062W	TMA17	Q12513	150 aa		6.45	□□□□□ -1.38
LCB2	YDR062W	COB	P00163	385 aa		6.44	□□□□□ -1.38
LCB2	YDR062W	TRP2	P00899	507 aa	Known RBP	6.44	□□□□□ -1.38
LCB2	YDR062W	SBP1	P10080	294 aa	Known RBP	6.44	□□□□□ -1.38
LCB2	YDR062W	ECM2	P38241	364 aa	Known RBP	6.44	□□□□□ -1.38
LCB2	YDR062W	HLJ1	P48353	224 aa		6.44	□□□□□ -1.38
LCB2	YDR062W	YGR237C	P50089	785 aa		6.44	□□□□□ -1.38
LCB2	YDR062W	UGO1	Q03327	502 aa		6.44	□□□□□ -1.38
LCB2	YDR062W	TAF8	Q03750	510 aa		6.44	□□□□□ -1.38
LCB2	YDR062W	VMS1	Q04311	632 aa	Known RBP	6.44	□□□□□ -1.38
LCB2	YDR062W	YOR378W	Q08902	515 aa		6.44	□□□□□ -1.38
LCB2	YDR062W	THO2	P53552	1597 aa	Known RBP	6.43	□□□□□ -1.38
LCB2	YDR062W	TRX2	P22803	104 aa	Known RBP	6.43	□□□□□ -1.38
LCB2	YDR062W	SQT1	P35184	431 aa		6.43	□□□□□ -1.38
LCB2	YDR062W	VBA5	P36172	582 aa		6.43	□□□□□ -1.38
LCB2	YDR062W	SEA4	P38164	1038 aa		6.43	□□□□□ -1.38
LCB2	YDR062W	YBL086C	P38177	466 aa		6.43	□□□□□ -1.38
LCB2	YDR062W	GIP1	P38229	639 aa		6.43	□□□□□ -1.38
LCB2	YDR062W	BSD2	P38356	321 aa		6.43	□□□□□ -1.38
LCB2	YDR062W	RVS167	P39743	482 aa	Known RBP	6.43	□□□□□ -1.38
LCB2	YDR062W	FKH1	P40466	484 aa		6.43	□□□□□ -1.38
LCB2	YDR062W	RSM26	P47141	266 aa		6.43	□□□□□ -1.38
LCB2	YDR062W	RTA1	P53047	317 aa		6.43	□□□□□ -1.38
LCB2	YDR062W	SLX4	Q12098	748 aa		6.43	□□□□□ -1.38
LCB2	YDR062W	DPB3	P27344	201 aa		6.42	□□□□□ -1.38
LCB2	YDR062W	ABD1	P32783	436 aa	Predicted RBP	6.42	□□□□□ -1.38
LCB2	YDR062W	PBY1	P38254	753 aa		6.42	□□□□□ -1.38
LCB2	YDR062W	SAP30	P38429	201 aa		6.42	□□□□□ -1.38
LCB2	YDR062W	MDG1	P53885	366 aa		6.42	□□□□□ -1.38
LCB2	YDR062W	NKP1	Q12493	238 aa		6.42	□□□□□ -1.38
LCB2	YDR062W	MRT4	P33201	236 aa	Known RBP	6.42	□□□□□ -1.38
LCB2	YDR062W	AIM46	P38885	310 aa		6.42	□□□□□ -1.38
LCB2	YDR062W	PMT3	P47190	753 aa		6.42	□□□□□ -1.38
LCB2	YDR062W	UTP8	P53276	713 aa	Known RBP	6.42	□□□□□ -1.38
LCB2	YDR062W	YML082W	Q04533	649 aa	Known RBP	6.42	□□□□□ -1.38
LCB2	YDR062W	YOR296W	Q08748	1289 aa		6.42	□□□□□ -1.38
LCB2	YDR062W	TMA7	Q3E764	64 aa	Known RBP	6.42	□□□□□ -1.38
LCB2	YDR062W	TAF13	P11747	167 aa		6.41	□□□□□ -1.38
LCB2	YDR062W	CDC11	P32458	415 aa		6.41	□□□□□ -1.38
LCB2	YDR062W	LYP1	P32487	611 aa		6.41	□□□□□ -1.38
LCB2	YDR062W	KAP122	P32767	1081 aa		6.41	□□□□□ -1.38
LCB2	YDR062W	ERP2	P39704	215 aa		6.41	□□□□□ -1.38
LCB2	YDR062W	SNF7	P39929	240 aa	Known RBP	6.41	□□□□□ -1.38
LCB2	YDR062W	AIR2	Q12476	344 aa	Known RBP	6.41	□□□□□ -1.38
LCB2	YDR062W	SRF1	Q12516	437 aa		6.41	□□□□□ -1.38
LCB2	YDR062W	HIR3	P47171	1648 aa		6.4	□□□□□ -1.38
LCB2	YDR062W	NUP145	P49687	1317 aa		6.4	□□□□□ -1.38
LCB2	YDR062W	SEC23	P15303	768 aa	Known RBP	6.4	□□□□□ -1.38
LCB2	YDR062W	RPA135	P22138	1203 aa	Known RBP	6.4	□□□□□ -1.38
LCB2	YDR062W	PEX6	P33760	1030 aa		6.4	□□□□□ -1.38
LCB2	YDR062W	BET3	P36149	193 aa		6.4	□□□□□ -1.38
LCB2	YDR062W	GEM1	P39722	662 aa		6.4	□□□□□ -1.38
LCB2	YDR062W	ALA1	P40825	983 aa	Known RBP	6.4	□□□□□ -1.38
LCB2	YDR062W	YJR120W	P47157	116 aa		6.4	□□□□□ -1.38
LCB2	YDR062W	HSV2	P50079	448 aa	Predicted RBP	6.4	□□□□□ -1.38
LCB2	YDR062W	FRK1	Q03002	865 aa	Predicted RBP	6.4	□□□□□ -1.38
LCB2	YDR062W	SAS4	Q04003	481 aa		6.4	□□□□□ -1.38
LCB2	YDR062W	HDA2	Q06629	674 aa		6.4	□□□□□ -1.38
LCB2	YDR062W	PMT7	Q06644	662 aa		6.4	□□□□□ -1.38
LCB2	YDR062W	RPC31	P17890	251 aa		6.39	□□□□□ -1.39
LCB2	YDR062W	DUR3	P33413	735 aa		6.39	□□□□□ -1.39
LCB2	YDR062W	PEX28	P38848	579 aa		6.39	□□□□□ -1.39
LCB2	YDR062W	NIT1	P40447	199 aa		6.39	□□□□□ -1.39
LCB2	YDR062W	YDL124W	Q07551	312 aa	Known RBP	6.39	□□□□□ -1.39
LCB2	YDR062W	ATP4	P05626	244 aa		6.39	□□□□□ -1.39
LCB2	YDR062W	PRP9	P19736	530 aa	Known RBP	6.39	□□□□□ -1.39
LCB2	YDR062W	RER2	P35196	286 aa		6.39	□□□□□ -1.39
LCB2	YDR062W	HXT13	P39924	564 aa		6.39	□□□□□ -1.39
LCB2	YDR062W	YTA6	P40328	754 aa		6.39	□□□□□ -1.39
LCB2	YDR062W	ALR2	P43553	858 aa		6.39	□□□□□ -1.39
LCB2	YDR062W	SAP155	P43612	1002 aa		6.39	□□□□□ -1.39
LCB2	YDR062W	DAS1	P47005	663 aa		6.39	□□□□□ -1.39
LCB2	YDR062W	HXT17	P53631	564 aa		6.39	□□□□□ -1.39
LCB2	YDR062W	ALO1	P54783	526 aa	Known RBP	6.39	□□□□□ -1.39
LCB2	YDR062W	HXT15	P54854	567 aa		6.39	□□□□□ -1.39
LCB2	YDR062W	ATG16	Q03818	150 aa		6.39	□□□□□ -1.39
LCB2	YDR062W	YLR225C	Q05948	407 aa	Known RBP	6.39	□□□□□ -1.39
LCB2	YDR062W	EMG1	Q06287	252 aa	Known RBP	6.39	□□□□□ -1.39
LCB2	YDR062W	BRE1	Q07457	700 aa	Known RBP	6.39	□□□□□ -1.39
LCB2	YDR062W	PYC2	P32327	1180 aa	Known RBP	6.38	□□□□□ -1.39
LCB2	YDR062W	BDP1	P46678	594 aa		6.38	□□□□□ -1.39
LCB2	YDR062W	MAL11	P53048	616 aa		6.38	□□□□□ -1.39
LCB2	YDR062W	YGL140C	P53120	1219 aa		6.38	□□□□□ -1.39
LCB2	YDR062W	SIW14	P53965	281 aa		6.38	□□□□□ -1.39
LCB2	YDR062W	UME1	Q03010	460 aa		6.38	□□□□□ -1.39
LCB2	YDR062W	SND1	Q04007	877 aa		6.38	□□□□□ -1.39
LCB2	YDR062W	NYV1	Q12255	253 aa		6.38	□□□□□ -1.39
LCB2	YDR062W	BUD4	P47136	1447 aa		6.37	□□□□□ -1.39
LCB2	YDR062W	ECM5	Q03214	1411 aa		6.37	□□□□□ -1.39
LCB2	YDR062W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	6.37	□□□□□ -1.39	not detected
LCB2	YDR062W	GDH3	P39708	457 aa		6.37	□□□□□ -1.39

Retrieved 100 of 5,963 RNA–protein pairs in 59.6 ms