RNA–Protein interactions for RNA: ENST00000379960.9

ITSN1-201, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-201ENST00000379960 PRIMPOLQ96LW4 560 aa13.34□□□□□ -0.27
ITSN1-201ENST00000379960 FOXD4L1Q9NU39 408 aa13.34□□□□□ -0.27
ITSN1-201ENST00000379960 PTMSP20962 102 aa13.33□□□□□ -0.28
ITSN1-201ENST00000379960 DDIT3P35638 169 aa13.33□□□□□ -0.28
ITSN1-201ENST00000379960 CCDC66A2RUB6 948 aa13.33□□□□□ -0.28
ITSN1-201ENST00000379960 SOX12O15370 315 aa13.33□□□□□ -0.28
ITSN1-201ENST00000379960 APPP05067 770 aa13.33□□□□□ -0.28
ITSN1-201ENST00000379960 HMGN5P82970 282 aaKnown RBP13.33□□□□□ -0.28
ITSN1-201ENST00000379960 RAB3GAP1Q15042 981 aa13.33□□□□□ -0.28
ITSN1-201ENST00000379960 EIF3AQ14152 1382 aaKnown RBP13.32□□□□□ -0.28
ITSN1-201ENST00000379960 RPGRIP1LQ68CZ1 1315 aa13.32□□□□□ -0.28
ITSN1-201ENST00000379960 TRERF1Q96PN7 1200 aa13.32□□□□□ -0.28
ITSN1-201ENST00000379960 PPP6R1Q9UPN7 881 aa13.32□□□□□ -0.28
ITSN1-201ENST00000379960 GTF2F1P35269 517 aaKnown RBP eCLIP13.32□□□□□ -0.28
ITSN1-201ENST00000379960 NEURL4Q96JN8 1562 aa13.32□□□□□ -0.28
ITSN1-201ENST00000379960 PTMAP06454 111 aaKnown RBP13.31□□□□□ -0.28
ITSN1-201ENST00000379960 KLHL40Q2TBA0 621 aa13.31□□□□□ -0.28
ITSN1-201ENST00000379960 CAVIN1Q6NZI2 390 aaKnown RBP13.31□□□□□ -0.28
ITSN1-201ENST00000379960 IBTKQ9P2D0 1353 aaPredicted RBP13.31□□□□□ -0.28
ITSN1-201ENST00000379960 DUSP27Q5VZP5 1158 aa13.31□□□□□ -0.28
ITSN1-201ENST00000379960 NRXN1Q9ULB1 1477 aa13.31□□□□□ -0.28
ITSN1-201ENST00000379960 GOLGA6L22H0YM25 854 aa13.31□□□□□ -0.28
ITSN1-201ENST00000379960 WWC1Q8IX03 1113 aa13.31□□□□□ -0.28
ITSN1-201ENST00000379960 KIAA1210Q9ULL0 1709 aa13.3□□□□□ -0.28
ITSN1-201ENST00000379960 RBM25P49756 843 aaKnown RBP13.3□□□□□ -0.28
ITSN1-201ENST00000379960 HSP90AB1P08238 724 aaKnown RBP13.3□□□□□ -0.28
ITSN1-201ENST00000379960 PRIM1P49642 420 aaKnown RBP13.3□□□□□ -0.28
ITSN1-201ENST00000379960 ZNF445P59923 1031 aa13.29□□□□□ -0.28
ITSN1-201ENST00000379960 ZSCAN23Q3MJ62 389 aa13.29□□□□□ -0.28
ITSN1-201ENST00000379960 MPNDQ8N594 471 aa13.29□□□□□ -0.28
ITSN1-201ENST00000379960 TNRQ92752 1358 aa13.29□□□□□ -0.28
ITSN1-201ENST00000379960 SPATA31D1Q6ZQQ2 1576 aa13.29□□□□□ -0.28
ITSN1-201ENST00000379960 MMP14P50281 582 aa13.29□□□□□ -0.28
ITSN1-201ENST00000379960 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.29□□□□□ -0.28
ITSN1-201ENST00000379960 ERICH4A6NGS2 130 aa13.29□□□□□ -0.28
ITSN1-201ENST00000379960 SLFN14P0C7P3 912 aa13.29□□□□□ -0.28
ITSN1-201ENST00000379960 SSFA2P28290 1259 aa13.29□□□□□ -0.28
ITSN1-201ENST00000379960 PSEN1P49768 467 aa13.29□□□□□ -0.28
ITSN1-201ENST00000379960 BCCIPQ9P287 314 aaKnown RBP eCLIP13.29□□□□□ -0.28
ITSN1-201ENST00000379960 A2ML1A8K2U0 1454 aa13.28□□□□□ -0.28
ITSN1-201ENST00000379960 NCOA3Q9Y6Q9 1424 aa13.28□□□□□ -0.28
ITSN1-201ENST00000379960 GABPB1Q06547 395 aaPredicted RBP13.28□□□□□ -0.28
ITSN1-201ENST00000379960 BCAR3O75815 825 aa13.28□□□□□ -0.28
ITSN1-201ENST00000379960 CIZ1Q9ULV3 898 aaPredicted RBP13.28□□□□□ -0.28
ITSN1-201ENST00000379960 RIMS2Q9UQ26 1411 aa13.27□□□□□ -0.28
ITSN1-201ENST00000379960 ADGRB1O14514 1584 aa13.27□□□□□ -0.29
ITSN1-201ENST00000379960 TULP2O00295 520 aa13.27□□□□□ -0.29
ITSN1-201ENST00000379960 C17orf53Q8N3J3 647 aaPredicted RBP13.27□□□□□ -0.29
ITSN1-201ENST00000379960 OGFRQ9NZT2 677 aa13.27□□□□□ -0.29
ITSN1-201ENST00000379960 MINK1Q8N4C8 1332 aaPredicted RBP13.27□□□□□ -0.29
ITSN1-201ENST00000379960 SMC5Q8IY18 1101 aa13.26□□□□□ -0.29
ITSN1-201ENST00000379960 CLUAP1Q96AJ1 413 aa13.26□□□□□ -0.29
ITSN1-201ENST00000379960 FER1L4A9Z1Z3 1794 aa13.26□□□□□ -0.29
ITSN1-201ENST00000379960 CLGNO14967 610 aa13.26□□□□□ -0.29
ITSN1-201ENST00000379960 FEZ1Q99689 392 aa13.26□□□□□ -0.29
ITSN1-201ENST00000379960 BLMP54132 1417 aaPredicted RBP13.26□□□□□ -0.29
ITSN1-201ENST00000379960 PER1O15534 1290 aaPredicted RBP13.25□□□□□ -0.29
ITSN1-201ENST00000379960 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
ITSN1-201ENST00000379960 PDZRN3Q9UPQ7 1066 aa13.25□□□□□ -0.29
ITSN1-201ENST00000379960 RNF214Q8ND24 703 aa13.25□□□□□ -0.29
ITSN1-201ENST00000379960 PRAM1Q96QH2 718 aa13.25□□□□□ -0.29
ITSN1-201ENST00000379960 COG6Q9Y2V7 657 aa13.25□□□□□ -0.29
ITSN1-201ENST00000379960 QRICH2Q9H0J4 1663 aa13.25□□□□□ -0.29
ITSN1-201ENST00000379960 NOLC1Q14978 699 aaKnown RBP eCLIP13.24□□□□□ -0.29
ITSN1-201ENST00000379960 CABP2Q9NPB3 220 aa13.24□□□□□ -0.29
ITSN1-201ENST00000379960 ASXL1Q8IXJ9 1541 aa13.24□□□□□ -0.29
ITSN1-201ENST00000379960 LOC102724159A0A0B4J2E5 919 aa13.24□□□□□ -0.29
ITSN1-201ENST00000379960 PWP2Q15269 919 aaKnown RBP13.24□□□□□ -0.29
ITSN1-201ENST00000379960 WAPLQ7Z5K2 1190 aa13.24□□□□□ -0.29
ITSN1-201ENST00000379960 C3P01024 1663 aa13.24□□□□□ -0.29
ITSN1-201ENST00000379960 BAG4O95429 457 aaKnown RBP13.23□□□□□ -0.29
ITSN1-201ENST00000379960 SLC12A5Q9H2X9 1139 aa13.23□□□□□ -0.29
ITSN1-201ENST00000379960 CALCOCO1Q9P1Z2 691 aa13.23□□□□□ -0.29
ITSN1-201ENST00000379960 PLEKHH1Q9ULM0 1364 aa13.23□□□□□ -0.29
ITSN1-201ENST00000379960 NINLQ9Y2I6 1382 aa13.23□□□□□ -0.29
ITSN1-201ENST00000379960 TNNT3P45378 269 aaPredicted RBP13.23□□□□□ -0.29
ITSN1-201ENST00000379960 MCTP1Q6DN14 999 aa13.23□□□□□ -0.29
ITSN1-201ENST00000379960 ANKRD7Q92527 254 aa13.23□□□□□ -0.29
ITSN1-201ENST00000379960 RBM27Q9P2N5 1060 aaKnown RBP13.23□□□□□ -0.29
ITSN1-201ENST00000379960 KNSTRNQ9Y448 316 aa13.23□□□□□ -0.29
ITSN1-201ENST00000379960 SETBP1Q9Y6X0 1596 aa13.23□□□□□ -0.29
ITSN1-201ENST00000379960 GOLGA2Q08379 1002 aa13.23□□□□□ -0.29
ITSN1-201ENST00000379960 CDCA8Q53HL2 280 aa13.23□□□□□ -0.29
ITSN1-201ENST00000379960 PANK1Q8TE04 598 aa13.23□□□□□ -0.29
ITSN1-201ENST00000379960 GEMIN8Q9NWZ8 242 aaKnown RBP13.23□□□□□ -0.29
ITSN1-201ENST00000379960 KDM5AP29375 1690 aaKnown RBP13.22□□□□□ -0.29
ITSN1-201ENST00000379960 TERF2Q15554 542 aa13.22□□□□□ -0.29
ITSN1-201ENST00000379960 SLC26A8Q96RN1 970 aa13.22□□□□□ -0.29
ITSN1-201ENST00000379960 ALKQ9UM73 1620 aa13.22□□□□□ -0.29
ITSN1-201ENST00000379960 PIBF1Q8WXW3 757 aa13.22□□□□□ -0.29
ITSN1-201ENST00000379960 ARHGEF28Q8N1W1 1705 aaKnown RBP13.22□□□□□ -0.29
ITSN1-201ENST00000379960 CGNL1Q0VF96 1302 aa13.21□□□□□ -0.29
ITSN1-201ENST00000379960 LTKP29376 864 aa13.21□□□□□ -0.29
ITSN1-201ENST00000379960 SRPK2P78362 688 aaKnown RBP13.21□□□□□ -0.29
ITSN1-201ENST00000379960 YY1AP1Q9H869 796 aa13.21□□□□□ -0.29
ITSN1-201ENST00000379960 PARD3Q8TEW0 1356 aa13.21□□□□□ -0.29
ITSN1-201ENST00000379960 FEZ2Q9UHY8 353 aaPredicted RBP13.21□□□□□ -0.29
ITSN1-201ENST00000379960 RIOK3O14730 519 aaKnown RBP13.21□□□□□ -0.3
ITSN1-201ENST00000379960 EP400NLQ6ZTU2 488 aa13.21□□□□□ -0.3
ITSN1-201ENST00000379960 TXNDC2Q86VQ3 553 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms