RNA–Protein interactions for RNA: ENST00000379960.9

ITSN1-201, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-201ENST00000379960 NISCHQ9Y2I1 1504 aa21.62■■□□□ 1.05
ITSN1-201ENST00000379960 PELP1Q8IZL8 1130 aaKnown RBP18.82■□□□□ 0.6
ITSN1-201ENST00000379960 CCDC180Q9P1Z9 1646 aa18.67■□□□□ 0.58
ITSN1-201ENST00000379960 HRCP23327 699 aa18.39■□□□□ 0.54
ITSN1-201ENST00000379960 DCAF8L2P0C7V8 631 aa18.33■□□□□ 0.52
ITSN1-201ENST00000379960 MYT1Q01538 1121 aa18.28■□□□□ 0.52
ITSN1-201ENST00000379960 ZCCHC6Q5VYS8 1495 aaKnown RBP18.14■□□□□ 0.49
ITSN1-201ENST00000379960 SHROOM4Q9ULL8 1493 aa18.14■□□□□ 0.49
ITSN1-201ENST00000379960 PPARGC1BQ86YN6 1023 aaKnown RBP18.1■□□□□ 0.49
ITSN1-201ENST00000379960 ABCC9O60706 1549 aa17.99■□□□□ 0.47
ITSN1-201ENST00000379960 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
ITSN1-201ENST00000379960 PCGF6Q9BYE7 350 aa17.72■□□□□ 0.43
ITSN1-201ENST00000379960 DCAF1Q9Y4B6 1507 aa17.65■□□□□ 0.42
ITSN1-201ENST00000379960 SCRIBQ14160 1630 aa17.5■□□□□ 0.39
ITSN1-201ENST00000379960 SUPT5HO00267 1087 aaKnown RBP17.47■□□□□ 0.39
ITSN1-201ENST00000379960 NACADO15069 1562 aa17.41■□□□□ 0.38
ITSN1-201ENST00000379960 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
ITSN1-201ENST00000379960 TTBK1Q5TCY1 1321 aaPredicted RBP17.35■□□□□ 0.37
ITSN1-201ENST00000379960 RB1CC1Q8TDY2 1594 aa17.31■□□□□ 0.36
ITSN1-201ENST00000379960 ACIN1Q9UKV3 1341 aaKnown RBP17.16■□□□□ 0.34
ITSN1-201ENST00000379960 BCL11AQ9H165 835 aa17.16■□□□□ 0.34
ITSN1-201ENST00000379960 NEUROD1Q13562 356 aa17.12■□□□□ 0.33
ITSN1-201ENST00000379960 GTF3C3Q9Y5Q9 886 aa17.12■□□□□ 0.33
ITSN1-201ENST00000379960 UNC13AQ9UPW8 1703 aa17.09■□□□□ 0.33
ITSN1-201ENST00000379960 PABPN1Q86U42 306 aaKnown RBP eCLIP17.09■□□□□ 0.33
ITSN1-201ENST00000379960 PRKCSHP14314 528 aaPredicted RBP17.08■□□□□ 0.32
ITSN1-201ENST00000379960 FAM9AQ8IZU1 332 aaPredicted RBP17.02■□□□□ 0.31
ITSN1-201ENST00000379960 CECR2Q9BXF3 1484 aa16.97■□□□□ 0.31
ITSN1-201ENST00000379960 CENPBP07199 599 aaPredicted RBP16.95■□□□□ 0.3
ITSN1-201ENST00000379960 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
ITSN1-201ENST00000379960 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
ITSN1-201ENST00000379960 TRIM26Q12899 539 aaPredicted RBP16.85■□□□□ 0.29
ITSN1-201ENST00000379960 BICRAQ9NZM4 1560 aa16.85■□□□□ 0.29
ITSN1-201ENST00000379960 MROH2BQ7Z745 1585 aa16.82■□□□□ 0.28
ITSN1-201ENST00000379960 CHIC1Q5VXU3 224 aa16.76■□□□□ 0.27
ITSN1-201ENST00000379960 WIZO95785 1651 aa16.73■□□□□ 0.27
ITSN1-201ENST00000379960 BAZ1AQ9NRL2 1556 aaPredicted RBP16.66■□□□□ 0.26
ITSN1-201ENST00000379960 SMARCA4P51532 1647 aa16.63■□□□□ 0.25
ITSN1-201ENST00000379960 ANP32EQ9BTT0 268 aa16.61■□□□□ 0.25
ITSN1-201ENST00000379960 ERICH6Q7L0X2 663 aa16.56■□□□□ 0.24
ITSN1-201ENST00000379960 LOC105371045A0A1W2PR82 267 aa16.55■□□□□ 0.24
ITSN1-201ENST00000379960 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
ITSN1-201ENST00000379960 DIEXFQ68CQ4 756 aaKnown RBP16.48■□□□□ 0.23
ITSN1-201ENST00000379960 APLP2Q06481 763 aa16.43■□□□□ 0.22
ITSN1-201ENST00000379960 YTHDC1Q96MU7 727 aaKnown RBP16.41■□□□□ 0.22
ITSN1-201ENST00000379960 TOP2AP11388 1531 aaKnown RBP16.38■□□□□ 0.21
ITSN1-201ENST00000379960 EIF4G1Q04637 1599 aaKnown RBP16.36■□□□□ 0.21
ITSN1-201ENST00000379960 ATAD2BQ9ULI0 1458 aa16.34■□□□□ 0.21
ITSN1-201ENST00000379960 CCDC88BA6NC98 1476 aa16.33■□□□□ 0.2
ITSN1-201ENST00000379960 BAZ1BQ9UIG0 1483 aaKnown RBP16.3■□□□□ 0.2
ITSN1-201ENST00000379960 SMARCA2P51531 1590 aa16.3■□□□□ 0.2
ITSN1-201ENST00000379960 PEG3Q9GZU2 1588 aa16.26■□□□□ 0.19
ITSN1-201ENST00000379960 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
ITSN1-201ENST00000379960 TSHZ2Q9NRE2 1034 aa16.21■□□□□ 0.19
ITSN1-201ENST00000379960 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
ITSN1-201ENST00000379960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.16■□□□□ 0.18
ITSN1-201ENST00000379960 ABCC8Q09428 1581 aa16.15■□□□□ 0.18
ITSN1-201ENST00000379960 CC2D2AQ9P2K1 1620 aa16.15■□□□□ 0.18
ITSN1-201ENST00000379960 CCER1Q8TC90 406 aaPredicted RBP16.13■□□□□ 0.17
ITSN1-201ENST00000379960 NCAPD3P42695 1498 aa16.1■□□□□ 0.17
ITSN1-201ENST00000379960 SUPT16HQ9Y5B9 1047 aaKnown RBP16.07■□□□□ 0.16
ITSN1-201ENST00000379960 HMGXB3Q12766 1538 aa16.05■□□□□ 0.16
ITSN1-201ENST00000379960 ANO8Q9HCE9 1232 aaPredicted RBP16.04■□□□□ 0.16
ITSN1-201ENST00000379960 MIER1Q8N108 512 aa16■□□□□ 0.15
ITSN1-201ENST00000379960 DNAJC5BQ9UF47 199 aa16■□□□□ 0.15
ITSN1-201ENST00000379960 ZNF316A6NFI3 1004 aaPredicted RBP15.93■□□□□ 0.14
ITSN1-201ENST00000379960 WRNQ14191 1432 aaPredicted RBP eCLIP15.89■□□□□ 0.13
ITSN1-201ENST00000379960 CLSPNQ9HAW4 1339 aa15.87■□□□□ 0.13
ITSN1-201ENST00000379960 SYNJ1O43426 1573 aa15.85■□□□□ 0.13
ITSN1-201ENST00000379960 SOGA1O94964 1423 aa15.83■□□□□ 0.12
ITSN1-201ENST00000379960 NESP48681 1621 aa15.81■□□□□ 0.12
ITSN1-201ENST00000379960 CFTRP13569 1480 aa15.8■□□□□ 0.12
ITSN1-201ENST00000379960 RUSC2Q8N2Y8 1516 aa15.8■□□□□ 0.12
ITSN1-201ENST00000379960 CADPSQ9ULU8 1353 aa15.79■□□□□ 0.12
ITSN1-201ENST00000379960 SALL2Q9Y467 1007 aaPredicted RBP15.77■□□□□ 0.12
ITSN1-201ENST00000379960 CCDC136Q96JN2 1154 aa15.76■□□□□ 0.11
ITSN1-201ENST00000379960 RBM19Q9Y4C8 960 aaKnown RBP15.76■□□□□ 0.11
ITSN1-201ENST00000379960 BCANQ96GW7 911 aa15.73■□□□□ 0.11
ITSN1-201ENST00000379960 MSH5O43196 834 aa15.71■□□□□ 0.11
ITSN1-201ENST00000379960 UBE2Q2Q8WVN8 375 aa15.71■□□□□ 0.11
ITSN1-201ENST00000379960 CUX1P39880 1505 aa15.69■□□□□ 0.1
ITSN1-201ENST00000379960 PRDM2Q13029 1718 aa15.68■□□□□ 0.1
ITSN1-201ENST00000379960 TOP2BQ02880 1626 aa15.67■□□□□ 0.1
ITSN1-201ENST00000379960 DEKP35659 375 aaKnown RBP15.67■□□□□ 0.1
ITSN1-201ENST00000379960 FANCD2Q9BXW9 1451 aa15.66■□□□□ 0.1
ITSN1-201ENST00000379960 UBTFP17480 764 aaKnown RBP15.62■□□□□ 0.09
ITSN1-201ENST00000379960 BIVM-ERCC5R4GMW8 1640 aa15.62■□□□□ 0.09
ITSN1-201ENST00000379960 RANGAP1P46060 587 aaPredicted RBP15.6■□□□□ 0.09
ITSN1-201ENST00000379960 EIF5BO60841 1220 aaKnown RBP15.57■□□□□ 0.08
ITSN1-201ENST00000379960 LAMC3Q9Y6N6 1575 aa15.55■□□□□ 0.08
ITSN1-201ENST00000379960 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.55■□□□□ 0.08
ITSN1-201ENST00000379960 FGD5Q6ZNL6 1462 aa15.54■□□□□ 0.08
ITSN1-201ENST00000379960 MYT1LQ9UL68 1186 aa15.53■□□□□ 0.08
ITSN1-201ENST00000379960 CEP164Q9UPV0 1460 aa15.53■□□□□ 0.08
ITSN1-201ENST00000379960 KIF21AQ7Z4S6 1674 aa15.53■□□□□ 0.08
ITSN1-201ENST00000379960 EEA1Q15075 1411 aa15.52■□□□□ 0.08
ITSN1-201ENST00000379960 FKBP8Q14318 412 aa15.52■□□□□ 0.07
ITSN1-201ENST00000379960 ERICH6BQ5W0A0 696 aa15.5■□□□□ 0.07
ITSN1-201ENST00000379960 PDS5BQ9NTI5 1447 aa15.49■□□□□ 0.07
ITSN1-201ENST00000379960 RAD54L2Q9Y4B4 1467 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms