RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W ALD5P40047 520 aaKnown RBP2.49□□□□□ -2.01
SEC16YPL085W TOS4Q06266 489 aa2.49□□□□□ -2.01
SEC16YPL085W YPL150WQ12152 901 aa2.49□□□□□ -2.01
SEC16YPL085W PRP45P28004 379 aaPredicted RBP2.49□□□□□ -2.01
SEC16YPL085W VPS4P52917 437 aa2.49□□□□□ -2.01
SEC16YPL085W HUL5P53119 910 aa2.49□□□□□ -2.01
SEC16YPL085W YNL108CP53929 270 aa2.49□□□□□ -2.01
SEC16YPL085W HAP5Q02516 242 aa2.49□□□□□ -2.01
SEC16YPL085W RPC31P17890 251 aa2.49□□□□□ -2.01
SEC16YPL085W RTG3P38165 486 aa2.49□□□□□ -2.01
SEC16YPL085W RTS1P38903 757 aa2.49□□□□□ -2.01
SEC16YPL085W RET3P53600 189 aa2.49□□□□□ -2.01
SEC16YPL085W RCM1P53972 490 aa2.49□□□□□ -2.01
SEC16YPL085W VTC3Q02725 835 aa2.49□□□□□ -2.01
SEC16YPL085W PSR1Q07800 427 aa2.49□□□□□ -2.01
SEC16YPL085W INP54Q08227 384 aaKnown RBP2.49□□□□□ -2.01
SEC16YPL085W MPE1P35728 441 aaKnown RBP2.48□□□□□ -2.01
SEC16YPL085W MAL31P38156 614 aa2.48□□□□□ -2.01
SEC16YPL085W MAL13P53338 473 aa2.48□□□□□ -2.01
SEC16YPL085W NAF1P53919 492 aaKnown RBP2.48□□□□□ -2.01
SEC16YPL085W PEP3P27801 918 aa2.48□□□□□ -2.01
SEC16YPL085W CCT3P39077 534 aaKnown RBP2.48□□□□□ -2.01
SEC16YPL085W SEC28P40509 296 aaKnown RBP2.48□□□□□ -2.01
SEC16YPL085W TSR1Q07381 788 aaKnown RBP2.48□□□□□ -2.01
SEC16YPL085W HIF1Q12373 385 aa2.48□□□□□ -2.01
SEC16YPL085W ERG12P07277 443 aa2.48□□□□□ -2.01
SEC16YPL085W HEM1P09950 548 aaPredicted RBP2.48□□□□□ -2.01
SEC16YPL085W SRS2P12954 1174 aa2.48□□□□□ -2.01
SEC16YPL085W HCR1Q05775 265 aaKnown RBP2.48□□□□□ -2.01
SEC16YPL085W MDM38Q08179 573 aa2.48□□□□□ -2.01
SEC16YPL085W ATG34Q12292 412 aa2.48□□□□□ -2.01
SEC16YPL085W RLF2Q12495 606 aa2.48□□□□□ -2.01
SEC16YPL085W OSM1P21375 501 aaKnown RBP2.48□□□□□ -2.01
SEC16YPL085W YIL055CP40523 627 aaKnown RBP2.48□□□□□ -2.01
SEC16YPL085W SPN1Q06505 410 aaPredicted RBP2.48□□□□□ -2.01
SEC16YPL085W CLP1Q08685 445 aaPredicted RBP2.48□□□□□ -2.01
SEC16YPL085W ICL2Q12031 575 aa2.48□□□□□ -2.01
SEC16YPL085W ARP8Q12386 881 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
SEC16YPL085W UBC6P33296 250 aaPredicted RBP2.48□□□□□ -2.01
SEC16YPL085W PEX5P35056 612 aa2.48□□□□□ -2.01
SEC16YPL085W RPC37P36121 282 aa2.48□□□□□ -2.01
SEC16YPL085W NOT3P06102 836 aaKnown RBP2.47□□□□□ -2.01
SEC16YPL085W HCA4P20448 770 aaKnown RBP2.47□□□□□ -2.01
SEC16YPL085W MAK11P20484 414 aaKnown RBP2.47□□□□□ -2.01
SEC16YPL085W TPD3P31383 635 aa2.47□□□□□ -2.01
SEC16YPL085W BYE1P36106 594 aa2.47□□□□□ -2.01
SEC16YPL085W VPS8P39702 1274 aa2.47□□□□□ -2.01
SEC16YPL085W ISM1P48526 1002 aa2.47□□□□□ -2.01
SEC16YPL085W OYE2Q03558 400 aaKnown RBP2.47□□□□□ -2.01
SEC16YPL085W CCE1Q03702 353 aa2.47□□□□□ -2.01
SEC16YPL085W FPR4Q06205 392 aaPredicted RBP2.47□□□□□ -2.01
SEC16YPL085W GUD1Q07729 489 aa2.47□□□□□ -2.01
SEC16YPL085W NOP14Q99207 810 aaKnown RBP2.47□□□□□ -2.01
SEC16YPL085W ECM21P38167 1117 aaKnown RBP2.47□□□□□ -2.01
SEC16YPL085W FUI1P38196 639 aa2.47□□□□□ -2.01
SEC16YPL085W RGD1P38339 666 aa2.47□□□□□ -2.01
SEC16YPL085W SSZ1P38788 538 aaKnown RBP2.47□□□□□ -2.01
SEC16YPL085W GPB2P39717 880 aa2.47□□□□□ -2.01
SEC16YPL085W BOI2P39969 1040 aa2.47□□□□□ -2.01
SEC16YPL085W MXR1P40029 184 aa2.47□□□□□ -2.01
SEC16YPL085W AIM20P40451 204 aa2.47□□□□□ -2.01
SEC16YPL085W MAD1P40957 749 aa2.47□□□□□ -2.01
SEC16YPL085W IOC2Q12072 812 aa2.47□□□□□ -2.01
SEC16YPL085W SRF1Q12516 437 aa2.47□□□□□ -2.01
SEC16YPL085W RPL19AP0CX82 189 aaKnown RBP2.47□□□□□ -2.01
SEC16YPL085W RPL19BP0CX83 189 aaPredicted RBP2.47□□□□□ -2.01
SEC16YPL085W CLC1P17891 233 aa2.47□□□□□ -2.01
SEC16YPL085W BMH1P29311 267 aaKnown RBP2.47□□□□□ -2.01
SEC16YPL085W URB2P47108 1174 aa2.47□□□□□ -2.01
SEC16YPL085W FPK1P53739 893 aa2.47□□□□□ -2.01
SEC16YPL085W PEX29Q03370 554 aa2.47□□□□□ -2.01
SEC16YPL085W LCD1Q04377 747 aa2.47□□□□□ -2.01
SEC16YPL085W NYV1Q12255 253 aa2.47□□□□□ -2.01
SEC16YPL085W SPT2P06843 333 aaPredicted RBP2.47□□□□□ -2.01
SEC16YPL085W CNS1P33313 385 aa2.47□□□□□ -2.01
SEC16YPL085W SER1P33330 395 aaKnown RBP2.47□□□□□ -2.01
SEC16YPL085W RIM101P33400 625 aa2.47□□□□□ -2.01
SEC16YPL085W NUP82P40368 713 aa2.47□□□□□ -2.01
SEC16YPL085W VTC2P43585 828 aa2.47□□□□□ -2.01
SEC16YPL085W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01 RIP-Chip
SEC16YPL085W ELG1Q12050 791 aa2.47□□□□□ -2.01
SEC16YPL085W SWI1P09547 1314 aa2.47□□□□□ -2.01
SEC16YPL085W TRP5P00931 707 aaKnown RBP2.47□□□□□ -2.01
SEC16YPL085W VAS1P07806 1104 aaKnown RBP2.47□□□□□ -2.01
SEC16YPL085W ROX1P25042 368 aa2.47□□□□□ -2.01
SEC16YPL085W KTR1P27810 393 aaKnown RBP2.47□□□□□ -2.01
SEC16YPL085W NUP133P36161 1157 aa2.47□□□□□ -2.01
SEC16YPL085W SDS3P40505 327 aa2.47□□□□□ -2.01
SEC16YPL085W ITC1P53125 1264 aa2.47□□□□□ -2.01
SEC16YPL085W BNI4P53858 892 aa2.47□□□□□ -2.01
SEC16YPL085W GCR2Q01722 534 aa2.47□□□□□ -2.01
SEC16YPL085W VPS60Q03390 229 aa2.47□□□□□ -2.01
SEC16YPL085W MED1Q12321 566 aa2.47□□□□□ -2.01
SEC16YPL085W RPS3P05750 240 aaKnown RBP2.46□□□□□ -2.01
SEC16YPL085W PSO2P30620 661 aa2.46□□□□□ -2.01
SEC16YPL085W MET4P32389 672 aa2.46□□□□□ -2.01
SEC16YPL085W DPH2P32461 534 aa2.46□□□□□ -2.01
SEC16YPL085W REV7P38927 245 aa2.46□□□□□ -2.01
SEC16YPL085W JJJ2P46997 583 aa2.46□□□□□ -2.01
SEC16YPL085W YGL242CP53066 181 aa2.46□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms