RNA–Protein interactions for RNA: YOR205C

GEP3, Transcript of Protein required for mitochondrial ribosome small subunit biogenesis, yeast

Gene GEP3, Length 1,671 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEP3	YOR205C	IMP2'	P32351	346 aa		6.26	□□□□□ -1.41
GEP3	YOR205C	VPS24	P36095	224 aa	Known RBP	6.26	□□□□□ -1.41
GEP3	YOR205C	SHC1	P39000	512 aa		6.26	□□□□□ -1.41
GEP3	YOR205C	SET4	P42948	560 aa		6.26	□□□□□ -1.41
GEP3	YOR205C	KAR5	Q04746	504 aa		6.26	□□□□□ -1.41
GEP3	YOR205C	DPL1	Q05567	589 aa		6.26	□□□□□ -1.41
GEP3	YOR205C	TOS4	Q06266	489 aa		6.26	□□□□□ -1.41
GEP3	YOR205C	ACK1	Q07622	623 aa	Predicted RBP	6.26	□□□□□ -1.41
GEP3	YOR205C	DUR1,2	P32528	1835 aa	Known RBP	6.26	□□□□□ -1.41
GEP3	YOR205C	LAM4	P38800	1345 aa		6.26	□□□□□ -1.41
GEP3	YOR205C	TRL1	P09880	827 aa	Known RBP	6.26	□□□□□ -1.41
GEP3	YOR205C	PEP3	P27801	918 aa		6.26	□□□□□ -1.41
GEP3	YOR205C	APL6	P46682	809 aa		6.26	□□□□□ -1.41
GEP3	YOR205C	PUS6	P53294	404 aa		6.26	□□□□□ -1.41
GEP3	YOR205C	PKH3	Q03306	898 aa	Predicted RBP	6.26	□□□□□ -1.41
GEP3	YOR205C	CRF1	Q04930	467 aa		6.26	□□□□□ -1.41
GEP3	YOR205C	MRD1	Q06106	887 aa	Known RBP	6.26	□□□□□ -1.41
GEP3	YOR205C	MSM1	P22438	575 aa		6.25	□□□□□ -1.41
GEP3	YOR205C	IME2	P32581	645 aa		6.25	□□□□□ -1.41
GEP3	YOR205C	AIM9	P40053	627 aa	Known RBP	6.25	□□□□□ -1.41
GEP3	YOR205C	SQS1	P53866	767 aa	Known RBP	6.25	□□□□□ -1.41
GEP3	YOR205C	SPN1	Q06505	410 aa	Predicted RBP	6.25	□□□□□ -1.41
GEP3	YOR205C	LSP1	Q12230	341 aa	Known RBP	6.25	□□□□□ -1.41
GEP3	YOR205C	PGA3	Q12746	312 aa	Known RBP	6.25	□□□□□ -1.41
GEP3	YOR205C	FAS2	P19097	1887 aa	Known RBP	6.24	□□□□□ -1.41
GEP3	YOR205C	AFG2	P32794	780 aa		6.24	□□□□□ -1.41
GEP3	YOR205C	CRG1	P38892	291 aa	RIP-Chip data	6.24	□□□□□ -1.41	not detected
GEP3	YOR205C	UFD2	P54860	961 aa		6.24	□□□□□ -1.41
GEP3	YOR205C	VPS20	Q04272	221 aa		6.24	□□□□□ -1.41
GEP3	YOR205C	GAS5	Q08193	484 aa		6.24	□□□□□ -1.41
GEP3	YOR205C	PPM2	Q08282	695 aa		6.24	□□□□□ -1.41
GEP3	YOR205C	RPS7A	P26786	190 aa	Known RBP	6.23	□□□□□ -1.41
GEP3	YOR205C	BCK2	P33306	851 aa		6.23	□□□□□ -1.41
GEP3	YOR205C	VID28	P40547	921 aa		6.23	□□□□□ -1.41
GEP3	YOR205C	YKE2	P52553	114 aa		6.23	□□□□□ -1.41
GEP3	YOR205C	YPL260W	Q08977	551 aa		6.23	□□□□□ -1.41
GEP3	YOR205C	RPL19A	P0CX82	189 aa	Known RBP	6.23	□□□□□ -1.41
GEP3	YOR205C	RPL19B	P0CX83	189 aa	Predicted RBP	6.23	□□□□□ -1.41
GEP3	YOR205C	SNF3	P10870	884 aa		6.23	□□□□□ -1.41
GEP3	YOR205C	BIK1	P11709	440 aa		6.23	□□□□□ -1.41
GEP3	YOR205C	COQ1	P18900	473 aa		6.23	□□□□□ -1.41
GEP3	YOR205C	RIM101	P33400	625 aa		6.23	□□□□□ -1.41
GEP3	YOR205C	TTI1	P36097	1038 aa		6.23	□□□□□ -1.41
GEP3	YOR205C	RTS1	P38903	757 aa		6.23	□□□□□ -1.41
GEP3	YOR205C	PEX14	P53112	341 aa		6.23	□□□□□ -1.41
GEP3	YOR205C	FPK1	P53739	893 aa		6.23	□□□□□ -1.41
GEP3	YOR205C	ATG20	Q07528	640 aa		6.23	□□□□□ -1.41
GEP3	YOR205C	HKR1	P41809	1802 aa		6.22	□□□□□ -1.41
GEP3	YOR205C	RER2	P35196	286 aa		6.22	□□□□□ -1.41
GEP3	YOR205C	SLI15	P38283	698 aa		6.22	□□□□□ -1.41
GEP3	YOR205C	NPA3	P47122	385 aa		6.22	□□□□□ -1.41
GEP3	YOR205C	YGL081W	P53156	320 aa		6.22	□□□□□ -1.41
GEP3	YOR205C	RPS15	Q01855	142 aa	Known RBP	6.22	□□□□□ -1.41
GEP3	YOR205C	TRM44	Q02648	567 aa	Known RBP	6.22	□□□□□ -1.41
GEP3	YOR205C	EST2	Q06163	884 aa		6.22	□□□□□ -1.41
GEP3	YOR205C	PSK2	Q08217	1101 aa		6.22	□□□□□ -1.41
GEP3	YOR205C	NCR1	Q12200	1170 aa		6.22	□□□□□ -1.41
GEP3	YOR205C	RTG1	P32607	177 aa		6.21	□□□□□ -1.42
GEP3	YOR205C	DJP1	P40564	432 aa		6.21	□□□□□ -1.42
GEP3	YOR205C	COG8	Q04632	607 aa		6.21	□□□□□ -1.42
GEP3	YOR205C	MATALPHA2	P0CY08	210 aa		6.2	□□□□□ -1.42
GEP3	YOR205C	HMLALPHA2	P0CY09	210 aa		6.2	□□□□□ -1.42
GEP3	YOR205C	SSA1	P10591	642 aa	Known RBP	6.2	□□□□□ -1.42
GEP3	YOR205C	FBP26	P32604	452 aa		6.2	□□□□□ -1.42
GEP3	YOR205C	YHL017W	P38745	532 aa		6.2	□□□□□ -1.42
GEP3	YOR205C	BUD6	P41697	788 aa		6.2	□□□□□ -1.42
GEP3	YOR205C	CTF18	P49956	741 aa		6.2	□□□□□ -1.42
GEP3	YOR205C	TIM50	Q02776	476 aa		6.2	□□□□□ -1.42
GEP3	YOR205C	KEL3	Q08979	651 aa	Predicted RBP	6.2	□□□□□ -1.42
GEP3	YOR205C	AIM7	Q12156	149 aa		6.2	□□□□□ -1.42
GEP3	YOR205C	FLO1	P32768	1537 aa		6.2	□□□□□ -1.42
GEP3	YOR205C	FLO11	P08640	1367 aa		6.2	□□□□□ -1.42
GEP3	YOR205C	CHO2	P05374	869 aa	Known RBP	6.2	□□□□□ -1.42
GEP3	YOR205C	ALG2	P43636	503 aa		6.2	□□□□□ -1.42
GEP3	YOR205C	ENT3	P47160	408 aa		6.2	□□□□□ -1.42
GEP3	YOR205C	RAD61	Q99359	647 aa		6.2	□□□□□ -1.42
GEP3	YOR205C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	6.19	□□□□□ -1.42	not detected
GEP3	YOR205C	ANP1	P32629	500 aa		6.19	□□□□□ -1.42
GEP3	YOR205C	PRX1	P34227	261 aa	Known RBP	6.19	□□□□□ -1.42
GEP3	YOR205C	VPS8	P39702	1274 aa		6.19	□□□□□ -1.42
GEP3	YOR205C	VID27	P40157	782 aa		6.19	□□□□□ -1.42
GEP3	YOR205C	MSH4	P40965	878 aa	Predicted RBP	6.19	□□□□□ -1.42
GEP3	YOR205C	VPS4	P52917	437 aa		6.19	□□□□□ -1.42
GEP3	YOR205C	ELG1	Q12050	791 aa		6.19	□□□□□ -1.42
GEP3	YOR205C	MPH3	P0CE00	602 aa		6.18	□□□□□ -1.42
GEP3	YOR205C	RIT1	P23796	513 aa		6.18	□□□□□ -1.42
GEP3	YOR205C	GLC3	P32775	704 aa		6.18	□□□□□ -1.42
GEP3	YOR205C	YHL050C	P38721	697 aa		6.18	□□□□□ -1.42
GEP3	YOR205C	HST1	P53685	503 aa		6.18	□□□□□ -1.42
GEP3	YOR205C	PCL8	Q08966	492 aa		6.18	□□□□□ -1.42
GEP3	YOR205C	HPR1	P17629	752 aa	Known RBP	6.17	□□□□□ -1.42
GEP3	YOR205C	STV1	P37296	890 aa		6.17	□□□□□ -1.42
GEP3	YOR205C	BDH2	P39713	417 aa		6.17	□□□□□ -1.42
GEP3	YOR205C	SNF7	P39929	240 aa	Known RBP	6.17	□□□□□ -1.42
GEP3	YOR205C	FET4	P40988	552 aa		6.17	□□□□□ -1.42
GEP3	YOR205C	EPL1	P43572	832 aa		6.17	□□□□□ -1.42
GEP3	YOR205C	NSG2	P53898	299 aa		6.17	□□□□□ -1.42
GEP3	YOR205C	HRQ1	Q05549	1077 aa		6.17	□□□□□ -1.42
GEP3	YOR205C	TFC6	Q06339	672 aa		6.17	□□□□□ -1.42
GEP3	YOR205C	CPA2	P03965	1118 aa	Known RBP	6.17	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms