RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROD1	YOR018W	GCR2	Q01722	534 aa		4.57	□□□□□ -1.68
ROD1	YOR018W	FLO11	P08640	1367 aa		4.57	□□□□□ -1.68
ROD1	YOR018W	RAD50	P12753	1312 aa		4.57	□□□□□ -1.68
ROD1	YOR018W	GRX7	P38068	203 aa		4.57	□□□□□ -1.68
ROD1	YOR018W	PFF1	P38244	976 aa		4.57	□□□□□ -1.68
ROD1	YOR018W	SRC1	Q03707	834 aa		4.57	□□□□□ -1.68
ROD1	YOR018W	RRI2	Q12348	645 aa		4.57	□□□□□ -1.68
ROD1	YOR018W	TRL1	P09880	827 aa	Known RBP	4.56	□□□□□ -1.68
ROD1	YOR018W	SSF1	P38789	453 aa	Predicted RBP	4.56	□□□□□ -1.68
ROD1	YOR018W	FPK1	P53739	893 aa		4.56	□□□□□ -1.68
ROD1	YOR018W	CHO2	P05374	869 aa	Known RBP	4.56	□□□□□ -1.68
ROD1	YOR018W	SIT4	P20604	311 aa		4.56	□□□□□ -1.68
ROD1	YOR018W	BIO2	P32451	375 aa		4.56	□□□□□ -1.68
ROD1	YOR018W	HDA1	P53973	706 aa		4.56	□□□□□ -1.68
ROD1	YOR018W	CDC73	Q06697	393 aa		4.56	□□□□□ -1.68
ROD1	YOR018W	LAM4	P38800	1345 aa		4.56	□□□□□ -1.68
ROD1	YOR018W	POM152	P39685	1337 aa		4.56	□□□□□ -1.68
ROD1	YOR018W	STV1	P37296	890 aa		4.55	□□□□□ -1.68
ROD1	YOR018W	BRL1	P38770	471 aa		4.55	□□□□□ -1.68
ROD1	YOR018W	MLC1	P53141	149 aa		4.55	□□□□□ -1.68
ROD1	YOR018W	HST2	P53686	357 aa		4.55	□□□□□ -1.68
ROD1	YOR018W	ERO1	Q03103	563 aa		4.55	□□□□□ -1.68
ROD1	YOR018W	SUB2	Q07478	446 aa	Known RBP	4.55	□□□□□ -1.68
ROD1	YOR018W	ERG12	P07277	443 aa		4.55	□□□□□ -1.68
ROD1	YOR018W	SCJ1	P25303	377 aa		4.55	□□□□□ -1.68
ROD1	YOR018W	RPS7A	P26786	190 aa	Known RBP	4.55	□□□□□ -1.68
ROD1	YOR018W	HGH1	P48362	394 aa	Known RBP	4.55	□□□□□ -1.68
ROD1	YOR018W	PKH3	Q03306	898 aa	Predicted RBP	4.55	□□□□□ -1.68
ROD1	YOR018W	YKL222C	P35995	705 aa		4.54	□□□□□ -1.68
ROD1	YOR018W	PTK1	P36002	662 aa	Predicted RBP	4.54	□□□□□ -1.68
ROD1	YOR018W	PTK2	P47116	818 aa	Known RBP	4.54	□□□□□ -1.68
ROD1	YOR018W	ENT3	P47160	408 aa		4.54	□□□□□ -1.68
ROD1	YOR018W	SQS1	P53866	767 aa	Known RBP	4.54	□□□□□ -1.68
ROD1	YOR018W	DUR1,2	P32528	1835 aa	Known RBP	4.54	□□□□□ -1.68
ROD1	YOR018W	YER156C	P40093	338 aa	Known RBP	4.54	□□□□□ -1.68
ROD1	YOR018W	VID28	P40547	921 aa		4.54	□□□□□ -1.68
ROD1	YOR018W	YJL007C	P47080	104 aa		4.54	□□□□□ -1.68
ROD1	YOR018W	VPS4	P52917	437 aa		4.54	□□□□□ -1.68
ROD1	YOR018W	FPR4	Q06205	392 aa	Predicted RBP	4.54	□□□□□ -1.68
ROD1	YOR018W	BRE1	Q07457	700 aa	Known RBP	4.54	□□□□□ -1.68
ROD1	YOR018W	FAS2	P19097	1887 aa	Known RBP	4.54	□□□□□ -1.68
ROD1	YOR018W	SUP35	P05453	685 aa	Known RBP	4.53	□□□□□ -1.68
ROD1	YOR018W	TIF1	P10081	395 aa	Known RBP	4.53	□□□□□ -1.68
ROD1	YOR018W	AFG2	P32794	780 aa		4.53	□□□□□ -1.68
ROD1	YOR018W	YKU70	P32807	602 aa		4.53	□□□□□ -1.68
ROD1	YOR018W	PTC4	P38089	393 aa		4.53	□□□□□ -1.68
ROD1	YOR018W	CIC1	P38779	376 aa	Known RBP	4.53	□□□□□ -1.68
ROD1	YOR018W	RSC30	P38781	883 aa		4.53	□□□□□ -1.68
ROD1	YOR018W	STM1	P39015	273 aa	Known RBP	4.53	□□□□□ -1.68
ROD1	YOR018W	YGL081W	P53156	320 aa		4.53	□□□□□ -1.68
ROD1	YOR018W	DIB1	Q06819	143 aa	Predicted RBP	4.53	□□□□□ -1.68
ROD1	YOR018W	CTT1	P06115	562 aa		4.53	□□□□□ -1.68
ROD1	YOR018W	DJP1	P40564	432 aa		4.53	□□□□□ -1.68
ROD1	YOR018W	PPM2	Q08282	695 aa		4.53	□□□□□ -1.68
ROD1	YOR018W	PCT1	P13259	424 aa		4.52	□□□□□ -1.69
ROD1	YOR018W	COQ1	P18900	473 aa		4.52	□□□□□ -1.69
ROD1	YOR018W	MDL2	P33311	773 aa		4.52	□□□□□ -1.69
ROD1	YOR018W	KRI1	P42846	591 aa	Known RBP	4.52	□□□□□ -1.69
ROD1	YOR018W	KAR5	Q04746	504 aa		4.52	□□□□□ -1.69
ROD1	YOR018W	DPL1	Q05567	589 aa		4.52	□□□□□ -1.69
ROD1	YOR018W	YPR109W	Q06104	294 aa		4.52	□□□□□ -1.69
ROD1	YOR018W	CSC1	Q06538	782 aa		4.52	□□□□□ -1.69
ROD1	YOR018W	SNF3	P10870	884 aa		4.52	□□□□□ -1.69
ROD1	YOR018W	ESS1	P22696	170 aa		4.52	□□□□□ -1.69
ROD1	YOR018W	YJU3	P28321	313 aa		4.52	□□□□□ -1.69
ROD1	YOR018W	IMP2'	P32351	346 aa		4.52	□□□□□ -1.69
ROD1	YOR018W	NPA3	P47122	385 aa		4.52	□□□□□ -1.69
ROD1	YOR018W	IME2	P32581	645 aa		4.51	□□□□□ -1.69
ROD1	YOR018W	AIM9	P40053	627 aa	Known RBP	4.51	□□□□□ -1.69
ROD1	YOR018W	YFH7	P43591	353 aa		4.51	□□□□□ -1.69
ROD1	YOR018W	WRS1	Q12109	432 aa	Known RBP	4.51	□□□□□ -1.69
ROD1	YOR018W	YBL029C-A	Q3E756	94 aa		4.51	□□□□□ -1.69
ROD1	YOR018W	CLB5	P30283	435 aa		4.51	□□□□□ -1.69
ROD1	YOR018W	PRO3	P32263	286 aa	Known RBP	4.51	□□□□□ -1.69
ROD1	YOR018W	YHL050C	P38721	697 aa		4.51	□□□□□ -1.69
ROD1	YOR018W	MID1	P41821	548 aa		4.51	□□□□□ -1.69
ROD1	YOR018W	VNX1	P42839	908 aa		4.51	□□□□□ -1.69
ROD1	YOR018W	PRP42	Q03776	544 aa	Known RBP	4.51	□□□□□ -1.69
ROD1	YOR018W	ECM16	Q04217	1267 aa	Known RBP	4.51	□□□□□ -1.69
ROD1	YOR018W	VPS20	Q04272	221 aa		4.51	□□□□□ -1.69
ROD1	YOR018W	IOC2	Q12072	812 aa		4.51	□□□□□ -1.69
ROD1	YOR018W	RAD59	Q12223	238 aa		4.51	□□□□□ -1.69
ROD1	YOR018W	ARG82	P07250	355 aa		4.5	□□□□□ -1.69
ROD1	YOR018W	SUP45	P12385	437 aa	Known RBP	4.5	□□□□□ -1.69
ROD1	YOR018W	JJJ2	P46997	583 aa		4.5	□□□□□ -1.69
ROD1	YOR018W	FLO1	P32768	1537 aa		4.5	□□□□□ -1.69
ROD1	YOR018W	ACE2	P21192	770 aa		4.5	□□□□□ -1.69
ROD1	YOR018W	YIR014W	P40570	242 aa		4.5	□□□□□ -1.69
ROD1	YOR018W	TRM44	Q02648	567 aa	Known RBP	4.5	□□□□□ -1.69
ROD1	YOR018W	WSC3	Q12215	556 aa		4.5	□□□□□ -1.69
ROD1	YOR018W	BOI1	P38041	980 aa	Known RBP	4.49	□□□□□ -1.69
ROD1	YOR018W	EPL1	P43572	832 aa		4.49	□□□□□ -1.69
ROD1	YOR018W	IRC8	P47046	822 aa		4.49	□□□□□ -1.69
ROD1	YOR018W	TFB4	Q12004	338 aa		4.49	□□□□□ -1.69
ROD1	YOR018W	SRS2	P12954	1174 aa		4.49	□□□□□ -1.69
ROD1	YOR018W	NUG1	P40010	520 aa	Known RBP	4.49	□□□□□ -1.69
ROD1	YOR018W	MTC3	P53077	123 aa		4.49	□□□□□ -1.69
ROD1	YOR018W	PUS6	P53294	404 aa		4.49	□□□□□ -1.69
ROD1	YOR018W	NOB1	Q08444	459 aa	Known RBP	4.49	□□□□□ -1.69
ROD1	YOR018W	FIG2	P25653	1609 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms