RNA–Protein interactions for RNA: YGL103W

RPL28, Transcript of Ribosomal 60S subunit protein L28, yeastyeast

Gene RPL28, Length 450 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL28YGL103W RFT1P38206 574 aaPredicted RBP5.56□□□□□ -1.52
RPL28YGL103W SET1P38827 1080 aaKnown RBP5.56□□□□□ -1.52
RPL28YGL103W YMR147WP40218 223 aaKnown RBP5.56□□□□□ -1.52
RPL28YGL103W ADE16P54113 591 aaKnown RBP5.56□□□□□ -1.52
RPL28YGL103W FCP1Q03254 732 aa5.56□□□□□ -1.52
RPL28YGL103W HCR1Q05775 265 aaKnown RBP5.56□□□□□ -1.52
RPL28YGL103W RRI2Q12348 645 aa5.56□□□□□ -1.52
RPL28YGL103W YOL098CQ12496 1037 aa5.56□□□□□ -1.52
RPL28YGL103W AI2P03876 854 aa5.55□□□□□ -1.52
RPL28YGL103W PDC1P06169 563 aaKnown RBP5.55□□□□□ -1.52
RPL28YGL103W PFK2P16862 959 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
RPL28YGL103W UBC1P21734 215 aaKnown RBP5.55□□□□□ -1.52
RPL28YGL103W MSH3P25336 1018 aa5.55□□□□□ -1.52
RPL28YGL103W SLD2P34252 453 aa5.55□□□□□ -1.52
RPL28YGL103W PSY4P38193 441 aa5.55□□□□□ -1.52
RPL28YGL103W REI1P38344 393 aaPredicted RBP5.55□□□□□ -1.52
RPL28YGL103W RTT107P38850 1070 aa5.55□□□□□ -1.52
RPL28YGL103W UBP9P39967 754 aa5.55□□□□□ -1.52
RPL28YGL103W NDC80P40460 691 aa5.55□□□□□ -1.52
RPL28YGL103W YGL140CP53120 1219 aa5.55□□□□□ -1.52
RPL28YGL103W YNL193WP53870 558 aa5.55□□□□□ -1.52
RPL28YGL103W FRK1Q03002 865 aaPredicted RBP5.55□□□□□ -1.52
RPL28YGL103W YLR407WQ06070 228 aa5.55□□□□□ -1.52
RPL28YGL103W RPN7Q06103 429 aaKnown RBP5.55□□□□□ -1.52
RPL28YGL103W YLR271WQ06152 274 aa5.55□□□□□ -1.52
RPL28YGL103W RSF2P46974 1380 aa5.55□□□□□ -1.52
RPL28YGL103W SEC18P18759 758 aaKnown RBP5.54□□□□□ -1.52
RPL28YGL103W MCM4P30665 933 aaKnown RBP5.54□□□□□ -1.52
RPL28YGL103W SAP190P36123 1033 aa5.54□□□□□ -1.52
RPL28YGL103W RIX1P38883 763 aaPredicted RBP5.54□□□□□ -1.52
RPL28YGL103W SPT8P38915 602 aa5.54□□□□□ -1.52
RPL28YGL103W TIF4632P39936 914 aaKnown RBP5.54□□□□□ -1.52
RPL28YGL103W MTC5Q03897 1148 aa5.54□□□□□ -1.52
RPL28YGL103W GFD1Q04839 188 aaKnown RBP5.54□□□□□ -1.52
RPL28YGL103W TMA16Q08687 178 aa5.54□□□□□ -1.52
RPL28YGL103W SSF2Q12153 453 aaPredicted RBP5.54□□□□□ -1.52
RPL28YGL103W MCM16Q12262 181 aa5.54□□□□□ -1.52
RPL28YGL103W DPB3P27344 201 aa5.53□□□□□ -1.52
RPL28YGL103W SKI2P35207 1287 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
RPL28YGL103W ADE17P38009 592 aaKnown RBP5.53□□□□□ -1.52
RPL28YGL103W RPN10P38886 268 aaKnown RBP5.53□□□□□ -1.52
RPL28YGL103W RRP8P38961 392 aaKnown RBP5.53□□□□□ -1.52
RPL28YGL103W CCT4P39078 528 aaKnown RBP5.53□□□□□ -1.52
RPL28YGL103W ECM1P39715 212 aa5.53□□□□□ -1.52
RPL28YGL103W MVP1P40959 511 aaKnown RBP5.53□□□□□ -1.52
RPL28YGL103W SML1Q04964 104 aa5.53□□□□□ -1.52
RPL28YGL103W VPS38Q05919 439 aa5.53□□□□□ -1.52
RPL28YGL103W EST2Q06163 884 aa5.53□□□□□ -1.52
RPL28YGL103W YPR204WQ08995 1032 aa5.53□□□□□ -1.52
RPL28YGL103W SSA2P10592 639 aaKnown RBP5.52□□□□□ -1.53
RPL28YGL103W SEC65P29478 273 aa5.52□□□□□ -1.53
RPL28YGL103W STO1P34160 861 aaKnown RBP5.52□□□□□ -1.53
RPL28YGL103W RRP1P35178 278 aaPredicted RBP5.52□□□□□ -1.53
RPL28YGL103W YKL133CP36066 463 aa5.52□□□□□ -1.53
RPL28YGL103W MET1P36150 593 aa5.52□□□□□ -1.53
RPL28YGL103W MED8P38304 223 aa5.52□□□□□ -1.53
RPL28YGL103W SAP1P39955 897 aaKnown RBP5.52□□□□□ -1.53
RPL28YGL103W SEC9P40357 651 aa5.52□□□□□ -1.53
RPL28YGL103W STR2P47164 639 aa5.52□□□□□ -1.53
RPL28YGL103W CAF130P53280 1122 aaPredicted RBP5.52□□□□□ -1.53
RPL28YGL103W UBP16Q02863 499 aa5.52□□□□□ -1.53
RPL28YGL103W YMR102CQ03177 834 aa5.52□□□□□ -1.53
RPL28YGL103W GYL1Q04322 720 aa5.52□□□□□ -1.53
RPL28YGL103W CSC1Q06538 782 aa5.52□□□□□ -1.53
RPL28YGL103W OMS1Q06668 471 aa5.52□□□□□ -1.53
RPL28YGL103W ATG23Q06671 453 aa5.52□□□□□ -1.53
RPL28YGL103W AFT2Q08957 416 aa5.52□□□□□ -1.53
RPL28YGL103W CDC37P06101 506 aaKnown RBP5.51□□□□□ -1.53
RPL28YGL103W MPH3P0CE00 602 aa5.51□□□□□ -1.53
RPL28YGL103W PHO13P19881 312 aa5.51□□□□□ -1.53
RPL28YGL103W RPO26P20435 155 aa5.51□□□□□ -1.53
RPL28YGL103W STE11P23561 717 aa5.51□□□□□ -1.53
RPL28YGL103W SWE1P32944 819 aa5.51□□□□□ -1.53
RPL28YGL103W AKR1P39010 764 aa5.51□□□□□ -1.53
RPL28YGL103W IES2P40154 320 aa5.51□□□□□ -1.53
RPL28YGL103W FYV8P46949 817 aaKnown RBP5.51□□□□□ -1.53
RPL28YGL103W ALD3P54114 506 aa5.51□□□□□ -1.53
RPL28YGL103W ECM23Q02710 187 aa5.51□□□□□ -1.53
RPL28YGL103W SPN1Q06505 410 aaPredicted RBP5.51□□□□□ -1.53
RPL28YGL103W ATG9Q12142 997 aa5.51□□□□□ -1.53
RPL28YGL103W TAH18Q12181 623 aa5.51□□□□□ -1.53
RPL28YGL103W RUD3Q12234 484 aaKnown RBP5.51□□□□□ -1.53
RPL28YGL103W NBL1Q3E7Y6 73 aa5.51□□□□□ -1.53
RPL28YGL103W LAM4P38800 1345 aa5.5□□□□□ -1.53
RPL28YGL103W MSH1P25846 959 aa5.5□□□□□ -1.53
RPL28YGL103W YEL043WP32618 956 aa5.5□□□□□ -1.53
RPL28YGL103W RER2P35196 286 aa5.5□□□□□ -1.53
RPL28YGL103W CRG1P38892 291 aaRIP-Chip data5.5□□□□□ -1.53not detected
RPL28YGL103W MAL13P53338 473 aa5.5□□□□□ -1.53
RPL28YGL103W ALF1P53904 254 aa5.5□□□□□ -1.53
RPL28YGL103W OSH2Q12451 1283 aa5.5□□□□□ -1.53
RPL28YGL103W YOL087CQ99247 1116 aa5.5□□□□□ -1.53
RPL28YGL103W RPL22AP05749 121 aaKnown RBP5.49□□□□□ -1.53
RPL28YGL103W HOP09932 586 aa5.49□□□□□ -1.53
RPL28YGL103W ARG8P18544 423 aa5.49□□□□□ -1.53
RPL28YGL103W CBP3P21560 335 aa5.49□□□□□ -1.53
RPL28YGL103W URA1P28272 314 aaPredicted RBP5.49□□□□□ -1.53
RPL28YGL103W SER1P33330 395 aaKnown RBP5.49□□□□□ -1.53
RPL28YGL103W RGD1P38339 666 aa5.49□□□□□ -1.53
RPL28YGL103W FAR11P53917 953 aa5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms