RNA–Protein interactions for RNA: YFR051C

RET2, Transcript of Delta subunit of the coatomer complex (COPI), yeast

Gene RET2, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RET2	YFR051C	TAH18	Q12181	623 aa		11.95	□□□□□ -0.5
RET2	YFR051C	RRP8	P38961	392 aa	Known RBP	11.94	□□□□□ -0.5
RET2	YFR051C	MSH4	P40965	878 aa	Predicted RBP	11.94	□□□□□ -0.5
RET2	YFR051C	YPL260W	Q08977	551 aa		11.94	□□□□□ -0.5
RET2	YFR051C	RIM20	Q12033	661 aa		11.94	□□□□□ -0.5
RET2	YFR051C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	11.93	□□□□□ -0.5	not detected
RET2	YFR051C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	11.93	□□□□□ -0.5	not detected
RET2	YFR051C	PKH3	Q03306	898 aa	Predicted RBP	11.93	□□□□□ -0.5
RET2	YFR051C	LAM4	P38800	1345 aa		11.93	□□□□□ -0.5
RET2	YFR051C	OPI1	P21957	404 aa		11.93	□□□□□ -0.5
RET2	YFR051C	GIN4	Q12263	1142 aa		11.93	□□□□□ -0.5
RET2	YFR051C	HVG1	P0CE11	249 aa		11.92	□□□□□ -0.5
RET2	YFR051C	SLN1	P39928	1220 aa	Predicted RBP	11.92	□□□□□ -0.5
RET2	YFR051C	DUS1	P53759	423 aa	Known RBP	11.92	□□□□□ -0.5
RET2	YFR051C	PEX29	Q03370	554 aa		11.92	□□□□□ -0.5
RET2	YFR051C	FPR4	Q06205	392 aa	Predicted RBP	11.92	□□□□□ -0.5
RET2	YFR051C	YDL124W	Q07551	312 aa	Known RBP	11.92	□□□□□ -0.5
RET2	YFR051C	SPT21	P35209	758 aa		11.91	□□□□□ -0.5
RET2	YFR051C	MRD1	Q06106	887 aa	Known RBP	11.91	□□□□□ -0.5
RET2	YFR051C	TUB2	P02557	457 aa	Known RBP	11.9	□□□□□ -0.5
RET2	YFR051C	COQ1	P18900	473 aa		11.9	□□□□□ -0.5
RET2	YFR051C	MET1	P36150	593 aa		11.9	□□□□□ -0.5
RET2	YFR051C	SNU71	P53207	620 aa	Known RBP	11.9	□□□□□ -0.5
RET2	YFR051C	PPM2	Q08282	695 aa		11.9	□□□□□ -0.5
RET2	YFR051C	KIN1	P13185	1064 aa		11.89	□□□□□ -0.51
RET2	YFR051C	AAP1	P37898	856 aa	Known RBP	11.89	□□□□□ -0.51
RET2	YFR051C	RTS1	P38903	757 aa		11.89	□□□□□ -0.51
RET2	YFR051C	TIF6	Q12522	245 aa	Known RBP	11.89	□□□□□ -0.51
RET2	YFR051C	MPH3	P0CE00	602 aa		11.88	□□□□□ -0.51
RET2	YFR051C	BRN1	P38170	754 aa		11.88	□□□□□ -0.51
RET2	YFR051C	YHL050C	P38721	697 aa		11.88	□□□□□ -0.51
RET2	YFR051C	ACA1	P39970	489 aa		11.88	□□□□□ -0.51
RET2	YFR051C	CST9	Q06032	482 aa		11.88	□□□□□ -0.51
RET2	YFR051C	CST26	P38226	397 aa		11.87	□□□□□ -0.51
RET2	YFR051C	VID27	P40157	782 aa		11.87	□□□□□ -0.51
RET2	YFR051C	PRE8	P23639	250 aa		11.86	□□□□□ -0.51
RET2	YFR051C	UFD2	P54860	961 aa		11.86	□□□□□ -0.51
RET2	YFR051C	CHO2	P05374	869 aa	Known RBP	11.86	□□□□□ -0.51
RET2	YFR051C	RBA50	Q04418	439 aa		11.86	□□□□□ -0.51
RET2	YFR051C	LAP2	Q10740	671 aa		11.86	□□□□□ -0.51
RET2	YFR051C	RAD61	Q99359	647 aa		11.86	□□□□□ -0.51
RET2	YFR051C	SRM1	P21827	482 aa		11.85	□□□□□ -0.51
RET2	YFR051C	APE3	P37302	537 aa	Known RBP	11.85	□□□□□ -0.51
RET2	YFR051C	RSC30	P38781	883 aa		11.85	□□□□□ -0.51
RET2	YFR051C	SSF2	Q12153	453 aa	Predicted RBP	11.85	□□□□□ -0.51
RET2	YFR051C	GCR2	Q01722	534 aa		11.84	□□□□□ -0.51
RET2	YFR051C	RPS15	Q01855	142 aa	Known RBP	11.84	□□□□□ -0.51
RET2	YFR051C	JIP4	Q03361	876 aa		11.84	□□□□□ -0.51
RET2	YFR051C	TPM1	P17536	199 aa	Known RBP	11.83	□□□□□ -0.52
RET2	YFR051C	OCT1	P35999	772 aa		11.83	□□□□□ -0.52
RET2	YFR051C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	11.82	□□□□□ -0.52	not detected
RET2	YFR051C	VPS8	P39702	1274 aa		11.82	□□□□□ -0.52
RET2	YFR051C	HXT17	P53631	564 aa		11.82	□□□□□ -0.52
RET2	YFR051C	SRF1	Q12516	437 aa		11.82	□□□□□ -0.52
RET2	YFR051C	DLD1	P32891	587 aa		11.81	□□□□□ -0.52
RET2	YFR051C	MOT2	P34909	587 aa	Known RBP	11.8	□□□□□ -0.52
RET2	YFR051C	CIC1	P38779	376 aa	Known RBP	11.8	□□□□□ -0.52
RET2	YFR051C	LYS14	P40971	790 aa		11.8	□□□□□ -0.52
RET2	YFR051C	SKG3	Q06315	1026 aa		11.8	□□□□□ -0.52
RET2	YFR051C	SPN1	Q06505	410 aa	Predicted RBP	11.8	□□□□□ -0.52
RET2	YFR051C	KRS1	P15180	591 aa	Known RBP	11.79	□□□□□ -0.52
RET2	YFR051C	RIT1	P23796	513 aa		11.79	□□□□□ -0.52
RET2	YFR051C	PRO3	P32263	286 aa	Known RBP	11.79	□□□□□ -0.52
RET2	YFR051C	IMP2'	P32351	346 aa		11.79	□□□□□ -0.52
RET2	YFR051C	ASH1	P34233	588 aa		11.79	□□□□□ -0.52
RET2	YFR051C	HXT13	P39924	564 aa		11.79	□□□□□ -0.52
RET2	YFR051C	SUB2	Q07478	446 aa	Known RBP	11.79	□□□□□ -0.52
RET2	YFR051C	ERG12	P07277	443 aa		11.78	□□□□□ -0.52
RET2	YFR051C	FBP1	P09201	348 aa		11.78	□□□□□ -0.52
RET2	YFR051C	RPC31	P17890	251 aa		11.78	□□□□□ -0.52
RET2	YFR051C	YDJ1	P25491	409 aa	Known RBP	11.78	□□□□□ -0.52
RET2	YFR051C	CHS3	P29465	1165 aa		11.78	□□□□□ -0.52
RET2	YFR051C	ANP1	P32629	500 aa		11.78	□□□□□ -0.52
RET2	YFR051C	CRG1	P38892	291 aa	RIP-Chip data	11.78	□□□□□ -0.52	not detected
RET2	YFR051C	TIF4631	P39935	952 aa	Known RBP	11.78	□□□□□ -0.52
RET2	YFR051C	PGA3	Q12746	312 aa	Known RBP	11.78	□□□□□ -0.52
RET2	YFR051C	ACE2	P21192	770 aa		11.78	□□□□□ -0.52
RET2	YFR051C	RER2	P35196	286 aa		11.78	□□□□□ -0.52
RET2	YFR051C	MYO3	P36006	1272 aa		11.78	□□□□□ -0.52
RET2	YFR051C	MCD4	P36051	919 aa		11.78	□□□□□ -0.52
RET2	YFR051C	VAB2	P40003	282 aa		11.78	□□□□□ -0.52
RET2	YFR051C	NET1	P47035	1189 aa		11.78	□□□□□ -0.52
RET2	YFR051C	SPR3	P41901	512 aa		11.77	□□□□□ -0.53
RET2	YFR051C	ESF1	Q06344	628 aa	Known RBP	11.76	□□□□□ -0.53
RET2	YFR051C	SAM2	P19358	384 aa	Known RBP	11.75	□□□□□ -0.53
RET2	YFR051C	PEP3	P27801	918 aa		11.75	□□□□□ -0.53
RET2	YFR051C	KRI1	P42846	591 aa	Known RBP	11.75	□□□□□ -0.53
RET2	YFR051C	HDA1	P53973	706 aa		11.75	□□□□□ -0.53
RET2	YFR051C	IXR1	P33417	597 aa		11.75	□□□□□ -0.53
RET2	YFR051C	YJL007C	P47080	104 aa		11.75	□□□□□ -0.53
RET2	YFR051C	YML037C	Q03703	340 aa		11.75	□□□□□ -0.53
RET2	YFR051C	SGD1	Q06132	899 aa		11.75	□□□□□ -0.53
RET2	YFR051C	CFT2	Q12102	859 aa	Predicted RBP	11.75	□□□□□ -0.53
RET2	YFR051C	TUS1	Q06412	1307 aa		11.74	□□□□□ -0.53
RET2	YFR051C	ERG7	P38604	731 aa		11.74	□□□□□ -0.53
RET2	YFR051C	NCS6	P53088	359 aa		11.74	□□□□□ -0.53
RET2	YFR051C	PTK2	P47116	818 aa	Known RBP	11.73	□□□□□ -0.53
RET2	YFR051C	VPS30	Q02948	557 aa		11.73	□□□□□ -0.53
RET2	YFR051C	PER1	P25625	357 aa		11.72	□□□□□ -0.53
RET2	YFR051C	SPB4	P25808	606 aa	Predicted RBP	11.72	□□□□□ -0.53

Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms