RNA–Protein interactions for RNA: YEL047C

FRD1, Transcript of Soluble fumarate reductase, yeast

Gene FRD1, Length 1,413 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRD1	YEL047C	RAD53	P22216	821 aa		13.51	□□□□□ -0.25
FRD1	YEL047C	YHL050C	P38721	697 aa		13.51	□□□□□ -0.25
FRD1	YEL047C	HXT13	P39924	564 aa		13.51	□□□□□ -0.25
FRD1	YEL047C	NOP2	P40991	618 aa	Known RBP	13.51	□□□□□ -0.25
FRD1	YEL047C	PCL8	Q08966	492 aa		13.51	□□□□□ -0.25
FRD1	YEL047C	RPC31	P17890	251 aa		13.5	□□□□□ -0.25
FRD1	YEL047C	DLD1	P32891	587 aa		13.5	□□□□□ -0.25
FRD1	YEL047C	AAD16	Q02895	342 aa		13.5	□□□□□ -0.25
FRD1	YEL047C	YPL260W	Q08977	551 aa		13.5	□□□□□ -0.25
FRD1	YEL047C	MET1	P36150	593 aa		13.49	□□□□□ -0.25
FRD1	YEL047C	YBL028C	P38202	106 aa		13.48	□□□□□ -0.25
FRD1	YEL047C	RRP8	P38961	392 aa	Known RBP	13.48	□□□□□ -0.25
FRD1	YEL047C	SLN1	P39928	1220 aa	Predicted RBP	13.47	□□□□□ -0.25
FRD1	YEL047C	TUB2	P02557	457 aa	Known RBP	13.47	□□□□□ -0.25
FRD1	YEL047C	GAL2	P13181	574 aa		13.47	□□□□□ -0.25
FRD1	YEL047C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	13.47	□□□□□ -0.25	not detected
FRD1	YEL047C	RTS1	P38903	757 aa		13.47	□□□□□ -0.25
FRD1	YEL047C	YDL124W	Q07551	312 aa	Known RBP	13.47	□□□□□ -0.25
FRD1	YEL047C	SPT21	P35209	758 aa		13.46	□□□□□ -0.26
FRD1	YEL047C	MSH4	P40965	878 aa	Predicted RBP	13.46	□□□□□ -0.26
FRD1	YEL047C	MRD1	Q06106	887 aa	Known RBP	13.46	□□□□□ -0.26
FRD1	YEL047C	TYW1	Q08960	810 aa	Known RBP	13.46	□□□□□ -0.26
FRD1	YEL047C	PGA3	Q12746	312 aa	Known RBP	13.46	□□□□□ -0.26
FRD1	YEL047C	KIN1	P13185	1064 aa		13.45	□□□□□ -0.26
FRD1	YEL047C	TPS3	P38426	1054 aa	Known RBP	13.45	□□□□□ -0.26
FRD1	YEL047C	VID27	P40157	782 aa		13.45	□□□□□ -0.26
FRD1	YEL047C	PEX29	Q03370	554 aa		13.45	□□□□□ -0.26
FRD1	YEL047C	UFD2	P54860	961 aa		13.44	□□□□□ -0.26
FRD1	YEL047C	RPS15	Q01855	142 aa	Known RBP	13.44	□□□□□ -0.26
FRD1	YEL047C	ETP1	P38748	585 aa	Known RBP	13.43	□□□□□ -0.26
FRD1	YEL047C	CIC1	P38779	376 aa	Known RBP	13.43	□□□□□ -0.26
FRD1	YEL047C	RRD1	P40454	393 aa	Known RBP	13.43	□□□□□ -0.26
FRD1	YEL047C	RRT6	P53117	311 aa	Predicted RBP	13.43	□□□□□ -0.26
FRD1	YEL047C	SSF2	Q12153	453 aa	Predicted RBP	13.43	□□□□□ -0.26
FRD1	YEL047C	PRE8	P23639	250 aa		13.42	□□□□□ -0.26
FRD1	YEL047C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	13.42	□□□□□ -0.26	not detected
FRD1	YEL047C	RAD61	Q99359	647 aa		13.42	□□□□□ -0.26
FRD1	YEL047C	PRO3	P32263	286 aa	Known RBP	13.41	□□□□□ -0.26
FRD1	YEL047C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	13.41	□□□□□ -0.26	not detected
FRD1	YEL047C	HDA1	P53973	706 aa		13.41	□□□□□ -0.26
FRD1	YEL047C	GIN4	Q12263	1142 aa		13.41	□□□□□ -0.26
FRD1	YEL047C	MPH3	P0CE00	602 aa		13.4	□□□□□ -0.26
FRD1	YEL047C	IMP2'	P32351	346 aa		13.4	□□□□□ -0.26
FRD1	YEL047C	SRM1	P21827	482 aa		13.39	□□□□□ -0.27
FRD1	YEL047C	CST26	P38226	397 aa		13.39	□□□□□ -0.27
FRD1	YEL047C	ACA1	P39970	489 aa		13.39	□□□□□ -0.27
FRD1	YEL047C	SPN1	Q06505	410 aa	Predicted RBP	13.39	□□□□□ -0.27
FRD1	YEL047C	HVG1	P0CE11	249 aa		13.39	□□□□□ -0.27
FRD1	YEL047C	RER2	P35196	286 aa		13.39	□□□□□ -0.27
FRD1	YEL047C	PTK2	P47116	818 aa	Known RBP	13.39	□□□□□ -0.27
FRD1	YEL047C	SNU71	P53207	620 aa	Known RBP	13.39	□□□□□ -0.27
FRD1	YEL047C	LAP2	Q10740	671 aa		13.39	□□□□□ -0.27
FRD1	YEL047C	CHS3	P29465	1165 aa		13.38	□□□□□ -0.27
FRD1	YEL047C	ANP1	P32629	500 aa		13.38	□□□□□ -0.27
FRD1	YEL047C	MYO3	P36006	1272 aa		13.38	□□□□□ -0.27
FRD1	YEL047C	CRG1	P38892	291 aa	RIP-Chip data	13.38	□□□□□ -0.27	not detected
FRD1	YEL047C	KRS1	P15180	591 aa	Known RBP	13.37	□□□□□ -0.27
FRD1	YEL047C	ACE2	P21192	770 aa		13.37	□□□□□ -0.27
FRD1	YEL047C	RIT1	P23796	513 aa		13.37	□□□□□ -0.27
FRD1	YEL047C	SKG3	Q06315	1026 aa		13.37	□□□□□ -0.27
FRD1	YEL047C	TRL1	P09880	827 aa	Known RBP	13.36	□□□□□ -0.27
FRD1	YEL047C	TPM1	P17536	199 aa	Known RBP	13.36	□□□□□ -0.27
FRD1	YEL047C	PEP3	P27801	918 aa		13.36	□□□□□ -0.27
FRD1	YEL047C	BSD2	P38356	321 aa		13.36	□□□□□ -0.27
FRD1	YEL047C	VPS8	P39702	1274 aa		13.36	□□□□□ -0.27
FRD1	YEL047C	AIM9	P40053	627 aa	Known RBP	13.36	□□□□□ -0.27
FRD1	YEL047C	KRI1	P42846	591 aa	Known RBP	13.36	□□□□□ -0.27
FRD1	YEL047C	TIF4631	P39935	952 aa	Known RBP	13.34	□□□□□ -0.27
FRD1	YEL047C	ESF1	Q06344	628 aa	Known RBP	13.34	□□□□□ -0.27
FRD1	YEL047C	FBP1	P09201	348 aa		13.32	□□□□□ -0.28
FRD1	YEL047C	SAM2	P19358	384 aa	Known RBP	13.32	□□□□□ -0.28
FRD1	YEL047C	DUS1	P53759	423 aa	Known RBP	13.32	□□□□□ -0.28
FRD1	YEL047C	YDJ1	P25491	409 aa	Known RBP	13.31	□□□□□ -0.28
FRD1	YEL047C	OCT1	P35999	772 aa		13.31	□□□□□ -0.28
FRD1	YEL047C	CSM2	P40465	213 aa		13.31	□□□□□ -0.28
FRD1	YEL047C	VID28	P40547	921 aa		13.31	□□□□□ -0.28
FRD1	YEL047C	CST9	Q06032	482 aa		13.31	□□□□□ -0.28
FRD1	YEL047C	TFC6	Q06339	672 aa		13.31	□□□□□ -0.28
FRD1	YEL047C	RBA50	Q04418	439 aa		13.3	□□□□□ -0.28
FRD1	YEL047C	EST2	Q06163	884 aa		13.3	□□□□□ -0.28
FRD1	YEL047C	SPO22	P40511	975 aa		13.3	□□□□□ -0.28
FRD1	YEL047C	JIP4	Q03361	876 aa		13.3	□□□□□ -0.28
FRD1	YEL047C	TUS1	Q06412	1307 aa		13.29	□□□□□ -0.28
FRD1	YEL047C	MAK31	P23059	88 aa		13.29	□□□□□ -0.28
FRD1	YEL047C	APE3	P37302	537 aa	Known RBP	13.29	□□□□□ -0.28
FRD1	YEL047C	RPT6	Q01939	405 aa	Known RBP	13.29	□□□□□ -0.28
FRD1	YEL047C	MYO5	Q04439	1219 aa	Known RBP	13.29	□□□□□ -0.28
FRD1	YEL047C	TIF6	Q12522	245 aa	Known RBP	13.29	□□□□□ -0.28
FRD1	YEL047C	ERG12	P07277	443 aa		13.28	□□□□□ -0.28
FRD1	YEL047C	SPB4	P25808	606 aa	Predicted RBP	13.28	□□□□□ -0.28
FRD1	YEL047C	YJL007C	P47080	104 aa		13.28	□□□□□ -0.28
FRD1	YEL047C	FOL1	P53848	824 aa		13.28	□□□□□ -0.28
FRD1	YEL047C	ECM23	Q02710	187 aa		13.28	□□□□□ -0.28
FRD1	YEL047C	VPS30	Q02948	557 aa		13.28	□□□□□ -0.28
FRD1	YEL047C	MOT2	P34909	587 aa	Known RBP	13.27	□□□□□ -0.29
FRD1	YEL047C	UBP9	P39967	754 aa		13.27	□□□□□ -0.29
FRD1	YEL047C	YML037C	Q03703	340 aa		13.27	□□□□□ -0.29
FRD1	YEL047C	TSR3	Q12094	313 aa	Known RBP	13.27	□□□□□ -0.29
FRD1	YEL047C	RPL8B	P29453	256 aa	Known RBP	13.26	□□□□□ -0.29
FRD1	YEL047C	IXR1	P33417	597 aa		13.26	□□□□□ -0.29

Retrieved 100 of 5,963 RNA–protein pairs in 41.1 ms