RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS120	YDR407C	TOS1	P38288	455 aa		4.16	□□□□□ -1.74
TRS120	YDR407C	NPR2	P39923	615 aa		4.16	□□□□□ -1.74
TRS120	YDR407C	YER130C	P39959	443 aa		4.16	□□□□□ -1.74
TRS120	YDR407C	IRC3	Q06683	689 aa		4.16	□□□□□ -1.74
TRS120	YDR407C	ENT1	Q12518	454 aa		4.16	□□□□□ -1.74
TRS120	YDR407C	CYC8	P14922	966 aa		4.16	□□□□□ -1.74
TRS120	YDR407C	MUD2	P36084	527 aa	Known RBP	4.16	□□□□□ -1.74
TRS120	YDR407C	SHM1	P37292	490 aa	Predicted RBP	4.16	□□□□□ -1.74
TRS120	YDR407C	YGR153W	P48238	217 aa		4.16	□□□□□ -1.74
TRS120	YDR407C	COG8	Q04632	607 aa		4.16	□□□□□ -1.74
TRS120	YDR407C	SPN1	Q06505	410 aa	Predicted RBP	4.16	□□□□□ -1.74
TRS120	YDR407C	PSH1	Q12161	406 aa		4.16	□□□□□ -1.74
TRS120	YDR407C	NOP58	Q12499	511 aa	Known RBP	4.16	□□□□□ -1.74
TRS120	YDR407C	CDC6	P09119	513 aa		4.15	□□□□□ -1.74
TRS120	YDR407C	YKT6	P36015	200 aa	Known RBP	4.15	□□□□□ -1.74
TRS120	YDR407C	MMS21	P38632	267 aa		4.15	□□□□□ -1.74
TRS120	YDR407C	TDA3	P38758	523 aa		4.15	□□□□□ -1.74
TRS120	YDR407C	YNL193W	P53870	558 aa		4.15	□□□□□ -1.74
TRS120	YDR407C	SSF2	Q12153	453 aa	Predicted RBP	4.15	□□□□□ -1.74
TRS120	YDR407C	GCG1	P32656	232 aa	Known RBP	4.15	□□□□□ -1.75
TRS120	YDR407C	TCD1	P38756	429 aa		4.15	□□□□□ -1.75
TRS120	YDR407C	EFM4	P40516	257 aa		4.15	□□□□□ -1.75
TRS120	YDR407C	TDA5	Q06417	326 aa	Known RBP	4.15	□□□□□ -1.75
TRS120	YDR407C	MCM16	Q12262	181 aa		4.15	□□□□□ -1.75
TRS120	YDR407C	NCB2	Q92317	146 aa		4.15	□□□□□ -1.75
TRS120	YDR407C	COQ1	P18900	473 aa		4.15	□□□□□ -1.75
TRS120	YDR407C	BMH2	P34730	273 aa	Known RBP	4.15	□□□□□ -1.75
TRS120	YDR407C	LYS14	P40971	790 aa		4.15	□□□□□ -1.75
TRS120	YDR407C	YJL171C	P46992	396 aa		4.15	□□□□□ -1.75
TRS120	YDR407C	SPB4	P25808	606 aa	Predicted RBP	4.14	□□□□□ -1.75
TRS120	YDR407C	YKL133C	P36066	463 aa		4.14	□□□□□ -1.75
TRS120	YDR407C	POB3	Q04636	552 aa	Known RBP	4.14	□□□□□ -1.75
TRS120	YDR407C	FPR4	Q06205	392 aa	Predicted RBP	4.14	□□□□□ -1.75
TRS120	YDR407C	PGA3	Q12746	312 aa	Known RBP	4.14	□□□□□ -1.75
TRS120	YDR407C	COB	P00163	385 aa		4.14	□□□□□ -1.75
TRS120	YDR407C	MNN4	P36044	1178 aa		4.14	□□□□□ -1.75
TRS120	YDR407C	DID4	P36108	232 aa		4.14	□□□□□ -1.75
TRS120	YDR407C	GRE2	Q12068	342 aa	Known RBP	4.14	□□□□□ -1.75
TRS120	YDR407C	TSR3	Q12094	313 aa	Known RBP	4.14	□□□□□ -1.75
TRS120	YDR407C	HAT1	Q12341	374 aa		4.14	□□□□□ -1.75
TRS120	YDR407C	NOP6	Q07623	225 aa	Known RBP	4.14	□□□□□ -1.75
TRS120	YDR407C	HMI1	Q12039	706 aa		4.14	□□□□□ -1.75
TRS120	YDR407C	TRS33	Q99394	268 aa		4.14	□□□□□ -1.75
TRS120	YDR407C	TPM1	P17536	199 aa	Known RBP	4.13	□□□□□ -1.75
TRS120	YDR407C	VPS1	P21576	704 aa	Known RBP	4.13	□□□□□ -1.75
TRS120	YDR407C	DIT2	P21595	489 aa		4.13	□□□□□ -1.75
TRS120	YDR407C	SWI4	P25302	1093 aa	Known RBP	4.13	□□□□□ -1.75
TRS120	YDR407C	LTV1	P34078	463 aa		4.13	□□□□□ -1.75
TRS120	YDR407C	RER2	P35196	286 aa		4.13	□□□□□ -1.75
TRS120	YDR407C	NUG1	P40010	520 aa	Known RBP	4.13	□□□□□ -1.75
TRS120	YDR407C	APL4	Q12028	832 aa		4.13	□□□□□ -1.75
TRS120	YDR407C	CHO2	P05374	869 aa	Known RBP	4.13	□□□□□ -1.75
TRS120	YDR407C	YEL043W	P32618	956 aa		4.13	□□□□□ -1.75
TRS120	YDR407C	MET1	P36150	593 aa		4.13	□□□□□ -1.75
TRS120	YDR407C	GRX7	P38068	203 aa		4.13	□□□□□ -1.75
TRS120	YDR407C	YBP2	P53169	641 aa		4.13	□□□□□ -1.75
TRS120	YDR407C	VPS75	P53853	264 aa		4.13	□□□□□ -1.75
TRS120	YDR407C	MRS2	Q01926	470 aa		4.13	□□□□□ -1.75
TRS120	YDR407C	TIM50	Q02776	476 aa		4.13	□□□□□ -1.75
TRS120	YDR407C	SKG3	Q06315	1026 aa		4.13	□□□□□ -1.75
TRS120	YDR407C	TMA16	Q08687	178 aa		4.13	□□□□□ -1.75
TRS120	YDR407C	TCO89	Q08921	799 aa		4.13	□□□□□ -1.75
TRS120	YDR407C	GET3	Q12154	354 aa	Known RBP	4.13	□□□□□ -1.75
TRS120	YDR407C	DPB3	P27344	201 aa		4.13	□□□□□ -1.75
TRS120	YDR407C	YKE2	P52553	114 aa		4.13	□□□□□ -1.75
TRS120	YDR407C	YGR130C	P53278	816 aa		4.13	□□□□□ -1.75
TRS120	YDR407C	SML1	Q04964	104 aa		4.13	□□□□□ -1.75
TRS120	YDR407C	FOB1	O13329	566 aa		4.12	□□□□□ -1.75
TRS120	YDR407C	RNR3	P21672	869 aa	Known RBP	4.12	□□□□□ -1.75
TRS120	YDR407C	MRC1	P25588	1096 aa		4.12	□□□□□ -1.75
TRS120	YDR407C	CTH1	P47976	325 aa		4.12	□□□□□ -1.75
TRS120	YDR407C	NGL3	Q03210	505 aa		4.12	□□□□□ -1.75
TRS120	YDR407C	ERG7	P38604	731 aa		4.12	□□□□□ -1.75
TRS120	YDR407C	UBP5	P39944	805 aa		4.12	□□□□□ -1.75
TRS120	YDR407C	ICP55	P40051	511 aa		4.12	□□□□□ -1.75
TRS120	YDR407C	FUS2	Q05670	677 aa		4.12	□□□□□ -1.75
TRS120	YDR407C	IMH1	Q06704	911 aa	Known RBP	4.12	□□□□□ -1.75
TRS120	YDR407C	CIC1	P38779	376 aa	Known RBP	4.12	□□□□□ -1.75
TRS120	YDR407C	UTP22	P53254	1237 aa	Predicted RBP	4.12	□□□□□ -1.75
TRS120	YDR407C	HDA1	P53973	706 aa		4.12	□□□□□ -1.75
TRS120	YDR407C	CTK3	P46963	296 aa	Predicted RBP	4.11	□□□□□ -1.75
TRS120	YDR407C	ERG5	P54781	538 aa		4.11	□□□□□ -1.75
TRS120	YDR407C	RPS15	Q01855	142 aa	Known RBP	4.11	□□□□□ -1.75
TRS120	YDR407C	NOP8	Q08287	484 aa	Predicted RBP	4.11	□□□□□ -1.75
TRS120	YDR407C	ATG9	Q12142	997 aa		4.11	□□□□□ -1.75
TRS120	YDR407C	TFC8	Q12308	588 aa		4.11	□□□□□ -1.75
TRS120	YDR407C	TUP1	P16649	713 aa		4.11	□□□□□ -1.75
TRS120	YDR407C	RRP1	P35178	278 aa	Predicted RBP	4.11	□□□□□ -1.75
TRS120	YDR407C	RXT2	P38255	430 aa		4.11	□□□□□ -1.75
TRS120	YDR407C	EFM2	P38347	419 aa		4.11	□□□□□ -1.75
TRS120	YDR407C	PCI8	P40512	444 aa		4.11	□□□□□ -1.75
TRS120	YDR407C	PEX14	P53112	341 aa		4.11	□□□□□ -1.75
TRS120	YDR407C	YNL035C	P53962	389 aa	Known RBP	4.11	□□□□□ -1.75
TRS120	YDR407C	SIL1	Q08199	421 aa		4.11	□□□□□ -1.75
TRS120	YDR407C	SLA1	P32790	1244 aa		4.11	□□□□□ -1.75
TRS120	YDR407C	RET3	P53600	189 aa		4.11	□□□□□ -1.75
TRS120	YDR407C	NAF1	P53919	492 aa	Known RBP	4.11	□□□□□ -1.75
TRS120	YDR407C	TOS4	Q06266	489 aa		4.11	□□□□□ -1.75
TRS120	YDR407C	TFC6	Q06339	672 aa		4.11	□□□□□ -1.75
TRS120	YDR407C	MIC60	P36112	540 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 78.9 ms