RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W BDF2Q07442 638 aa8.95□□□□□ -0.98
NDE2YDL085W PSF3Q12146 194 aa8.95□□□□□ -0.98
NDE2YDL085W CBP3P21560 335 aa8.94□□□□□ -0.98
NDE2YDL085W MGM1P32266 881 aa8.94□□□□□ -0.98
NDE2YDL085W RFT1P38206 574 aaPredicted RBP8.94□□□□□ -0.98
NDE2YDL085W ICP55P40051 511 aa8.94□□□□□ -0.98
NDE2YDL085W SSL2Q00578 843 aa8.94□□□□□ -0.98
NDE2YDL085W PFK2P16862 959 aaKnown RBP RIP-Chip data8.94□□□□□ -0.98not detected
NDE2YDL085W RER2P35196 286 aa8.94□□□□□ -0.98
NDE2YDL085W TFG2P41896 400 aaPredicted RBP8.94□□□□□ -0.98
NDE2YDL085W ALD3P54114 506 aa8.94□□□□□ -0.98
NDE2YDL085W SSA2P10592 639 aaKnown RBP8.93□□□□□ -0.98
NDE2YDL085W YKT6P36015 200 aaKnown RBP8.93□□□□□ -0.98
NDE2YDL085W RRM3P38766 723 aa8.93□□□□□ -0.98
NDE2YDL085W CTI6Q08923 506 aa8.93□□□□□ -0.98
NDE2YDL085W RPL22AP05749 121 aaKnown RBP8.92□□□□□ -0.98
NDE2YDL085W DIT2P21595 489 aa8.92□□□□□ -0.98
NDE2YDL085W ASF1P32447 279 aa8.92□□□□□ -0.98
NDE2YDL085W MFT1P33441 392 aaKnown RBP8.92□□□□□ -0.98
NDE2YDL085W YPT11P48559 417 aa8.92□□□□□ -0.98
NDE2YDL085W UBX2Q04228 584 aa8.92□□□□□ -0.98
NDE2YDL085W RPG1P38249 964 aaKnown RBP8.91□□□□□ -0.98
NDE2YDL085W CEP3P40969 608 aa8.91□□□□□ -0.98
NDE2YDL085W HPC2Q01448 625 aa8.91□□□□□ -0.98
NDE2YDL085W INM2Q05533 292 aa8.91□□□□□ -0.98
NDE2YDL085W IRC3Q06683 689 aa8.91□□□□□ -0.98
NDE2YDL085W PPM2Q08282 695 aa8.91□□□□□ -0.98
NDE2YDL085W SFI1Q12369 946 aa8.91□□□□□ -0.98
NDE2YDL085W BMH2P34730 273 aaKnown RBP8.91□□□□□ -0.98
NDE2YDL085W BOI1P38041 980 aaKnown RBP8.91□□□□□ -0.98
NDE2YDL085W ALG2P43636 503 aa8.91□□□□□ -0.98
NDE2YDL085W HSP82P02829 709 aaKnown RBP8.9□□□□□ -0.99
NDE2YDL085W GPA1P08539 472 aa8.9□□□□□ -0.99
NDE2YDL085W COQ1P18900 473 aa8.9□□□□□ -0.99
NDE2YDL085W YER130CP39959 443 aa8.9□□□□□ -0.99
NDE2YDL085W ALD2P47771 506 aa8.9□□□□□ -0.99
NDE2YDL085W RPS15Q01855 142 aaKnown RBP8.9□□□□□ -0.99
NDE2YDL085W SIT4P20604 311 aa8.89□□□□□ -0.99
NDE2YDL085W LTV1P34078 463 aa8.89□□□□□ -0.99
NDE2YDL085W MNR2P35724 969 aa8.89□□□□□ -0.99
NDE2YDL085W GRX7P38068 203 aa8.89□□□□□ -0.99
NDE2YDL085W GTT3P39996 337 aa8.89□□□□□ -0.99
NDE2YDL085W UFD2P54860 961 aa8.89□□□□□ -0.99
NDE2YDL085W SAS4Q04003 481 aa8.89□□□□□ -0.99
NDE2YDL085W HXK1P04806 485 aaKnown RBP8.88□□□□□ -0.99
NDE2YDL085W RTS1P38903 757 aa8.88□□□□□ -0.99
NDE2YDL085W EPL1P43572 832 aa8.88□□□□□ -0.99
NDE2YDL085W ISW2Q08773 1120 aa8.88□□□□□ -0.99
NDE2YDL085W SPC110P32380 944 aa8.87□□□□□ -0.99
NDE2YDL085W FRD1P32614 470 aaKnown RBP8.87□□□□□ -0.99
NDE2YDL085W MAL31P38156 614 aa8.87□□□□□ -0.99
NDE2YDL085W TOS1P38288 455 aa8.87□□□□□ -0.99
NDE2YDL085W RPN10P38886 268 aaKnown RBP8.87□□□□□ -0.99
NDE2YDL085W YIR042CP40586 236 aa8.87□□□□□ -0.99
NDE2YDL085W CWC22P53333 577 aaKnown RBP8.87□□□□□ -0.99
NDE2YDL085W FAP1P53971 965 aa8.87□□□□□ -0.99
NDE2YDL085W MRD1Q06106 887 aaKnown RBP8.87□□□□□ -0.99
NDE2YDL085W FAS2P19097 1887 aaKnown RBP8.87□□□□□ -0.99
NDE2YDL085W RGP1P16664 663 aa8.87□□□□□ -0.99
NDE2YDL085W KRE2P27809 442 aa8.87□□□□□ -0.99
NDE2YDL085W LYS4P49367 693 aaPredicted RBP8.87□□□□□ -0.99
NDE2YDL085W HCA4P20448 770 aaKnown RBP8.86□□□□□ -0.99
NDE2YDL085W BUD31P25337 157 aaPredicted RBP8.86□□□□□ -0.99
NDE2YDL085W PFF1P38244 976 aa8.86□□□□□ -0.99
NDE2YDL085W AKR1P39010 764 aa8.86□□□□□ -0.99
NDE2YDL085W YFH7P43591 353 aa8.86□□□□□ -0.99
NDE2YDL085W JJJ2P46997 583 aa8.86□□□□□ -0.99
NDE2YDL085W RPT4P53549 437 aaKnown RBP8.86□□□□□ -0.99
NDE2YDL085W GDE1Q02979 1223 aa8.86□□□□□ -0.99
NDE2YDL085W CEX1Q12453 761 aa8.86□□□□□ -0.99
NDE2YDL085W NBL1Q3E7Y6 73 aa8.86□□□□□ -0.99
NDE2YDL085W FIG2P25653 1609 aa8.85□□□□□ -0.99
NDE2YDL085W SWI4P25302 1093 aaKnown RBP8.85□□□□□ -0.99
NDE2YDL085W GSY2P27472 705 aa8.85□□□□□ -0.99
NDE2YDL085W ANP1P32629 500 aa8.85□□□□□ -0.99
NDE2YDL085W PTK1P36002 662 aaPredicted RBP8.85□□□□□ -0.99
NDE2YDL085W SPL2P38839 148 aa8.85□□□□□ -0.99
NDE2YDL085W JSN1P47135 1091 aaKnown RBP RIP-Chip data8.85□□□□□ -0.99not detected
NDE2YDL085W PIP2P52960 996 aa8.85□□□□□ -0.99
NDE2YDL085W IRC4Q03036 179 aa8.85□□□□□ -0.99
NDE2YDL085W VPS60Q03390 229 aa8.85□□□□□ -0.99
NDE2YDL085W VMS1Q04311 632 aaKnown RBP8.85□□□□□ -0.99
NDE2YDL085W TFC6Q06339 672 aa8.85□□□□□ -0.99
NDE2YDL085W MDL2P33311 773 aa8.84□□□□□ -0.99
NDE2YDL085W CTH1P47976 325 aa8.84□□□□□ -0.99
NDE2YDL085W CUE3P53137 624 aaKnown RBP8.84□□□□□ -0.99
NDE2YDL085W RIX7Q07844 837 aaKnown RBP8.84□□□□□ -0.99
NDE2YDL085W PET111P08468 800 aa8.83□□□□□ -1
NDE2YDL085W LCB1P25045 558 aaKnown RBP8.83□□□□□ -1
NDE2YDL085W SRP40P32583 406 aaPredicted RBP8.83□□□□□ -1
NDE2YDL085W MYO3P36006 1272 aa8.83□□□□□ -1
NDE2YDL085W CIN4P39110 191 aa8.83□□□□□ -1
NDE2YDL085W NOC2P39744 710 aaKnown RBP8.83□□□□□ -1
NDE2YDL085W FYV10P40492 516 aa8.83□□□□□ -1
NDE2YDL085W WAR1Q03631 944 aa8.83□□□□□ -1
NDE2YDL085W GET3Q12154 354 aaKnown RBP8.83□□□□□ -1
NDE2YDL085W DIP2Q12220 943 aaPredicted RBP8.83□□□□□ -1
NDE2YDL085W MCM3P24279 971 aaKnown RBP8.83□□□□□ -1
NDE2YDL085W MSH4P40965 878 aaPredicted RBP8.83□□□□□ -1
NDE2YDL085W RTC4P53850 401 aa8.83□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 104 ms