RNA–Protein interactions for RNA: YBR021W

FUR4, Transcript of Plasma membrane localized uracil permease, yeast

Gene FUR4, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FUR4	YBR021W	CLB1	P24868	471 aa		11.82	□□□□□ -0.52
FUR4	YBR021W	SAC3	P46674	1301 aa		11.82	□□□□□ -0.52
FUR4	YBR021W	RPL22A	P05749	121 aa	Known RBP	11.82	□□□□□ -0.52
FUR4	YBR021W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	11.82	□□□□□ -0.52	not detected
FUR4	YBR021W	CBP3	P21560	335 aa		11.82	□□□□□ -0.52
FUR4	YBR021W	SPT21	P35209	758 aa		11.82	□□□□□ -0.52
FUR4	YBR021W	MET1	P36150	593 aa		11.82	□□□□□ -0.52
FUR4	YBR021W	ALD3	P54114	506 aa		11.82	□□□□□ -0.52
FUR4	YBR021W	GIN4	Q12263	1142 aa		11.82	□□□□□ -0.52
FUR4	YBR021W	MPH3	P0CE00	602 aa		11.81	□□□□□ -0.52
FUR4	YBR021W	PHO13	P19881	312 aa		11.81	□□□□□ -0.52
FUR4	YBR021W	MSH1	P25846	959 aa		11.81	□□□□□ -0.52
FUR4	YBR021W	TLG2	Q08144	397 aa		11.81	□□□□□ -0.52
FUR4	YBR021W	TAH18	Q12181	623 aa		11.81	□□□□□ -0.52
FUR4	YBR021W	MCM16	Q12262	181 aa		11.81	□□□□□ -0.52
FUR4	YBR021W	UBC1	P21734	215 aa	Known RBP	11.8	□□□□□ -0.52
FUR4	YBR021W	CRG1	P38892	291 aa	RIP-Chip data	11.8	□□□□□ -0.52	not detected
FUR4	YBR021W	APT1	P49435	187 aa	Known RBP	11.8	□□□□□ -0.52
FUR4	YBR021W	RNT1	Q02555	471 aa		11.8	□□□□□ -0.52
FUR4	YBR021W	SML1	Q04964	104 aa		11.8	□□□□□ -0.52
FUR4	YBR021W	ADR1	P07248	1323 aa		11.8	□□□□□ -0.52
FUR4	YBR021W	PDC1	P06169	563 aa	Known RBP	11.8	□□□□□ -0.52
FUR4	YBR021W	MVP1	P40959	511 aa	Known RBP	11.8	□□□□□ -0.52
FUR4	YBR021W	RPN10	P38886	268 aa	Known RBP	11.79	□□□□□ -0.52
FUR4	YBR021W	VPS41	P38959	992 aa		11.79	□□□□□ -0.52
FUR4	YBR021W	EST2	Q06163	884 aa		11.79	□□□□□ -0.52
FUR4	YBR021W	SPN1	Q06505	410 aa	Predicted RBP	11.79	□□□□□ -0.52
FUR4	YBR021W	PXL1	P36166	706 aa		11.78	□□□□□ -0.52
FUR4	YBR021W	FAR11	P53917	953 aa		11.78	□□□□□ -0.52
FUR4	YBR021W	DCS2	Q12123	353 aa		11.78	□□□□□ -0.52
FUR4	YBR021W	RRI2	Q12348	645 aa		11.78	□□□□□ -0.52
FUR4	YBR021W	HCA4	P20448	770 aa	Known RBP	11.78	□□□□□ -0.52
FUR4	YBR021W	CAJ1	P39101	391 aa		11.78	□□□□□ -0.52
FUR4	YBR021W	RRB1	Q04225	511 aa	Known RBP	11.78	□□□□□ -0.52
FUR4	YBR021W	KAR5	Q04746	504 aa		11.78	□□□□□ -0.52
FUR4	YBR021W	HCR1	Q05775	265 aa	Known RBP	11.78	□□□□□ -0.52
FUR4	YBR021W	ADE17	P38009	592 aa	Known RBP	11.77	□□□□□ -0.53
FUR4	YBR021W	ENP2	P48234	707 aa	Known RBP	11.77	□□□□□ -0.53
FUR4	YBR021W	CUE3	P53137	624 aa	Known RBP	11.77	□□□□□ -0.53
FUR4	YBR021W	ALF1	P53904	254 aa		11.77	□□□□□ -0.53
FUR4	YBR021W	RBA50	Q04418	439 aa		11.77	□□□□□ -0.53
FUR4	YBR021W	RRP43	P25359	394 aa	Predicted RBP	11.76	□□□□□ -0.53
FUR4	YBR021W	DPB3	P27344	201 aa		11.76	□□□□□ -0.53
FUR4	YBR021W	URA1	P28272	314 aa	Predicted RBP	11.76	□□□□□ -0.53
FUR4	YBR021W	RER2	P35196	286 aa		11.76	□□□□□ -0.53
FUR4	YBR021W	YGL140C	P53120	1219 aa		11.76	□□□□□ -0.53
FUR4	YBR021W	CAF130	P53280	1122 aa	Predicted RBP	11.76	□□□□□ -0.53
FUR4	YBR021W	GFD1	Q04839	188 aa	Known RBP	11.76	□□□□□ -0.53
FUR4	YBR021W	RRP1	P35178	278 aa	Predicted RBP	11.76	□□□□□ -0.53
FUR4	YBR021W	AKR1	P39010	764 aa		11.76	□□□□□ -0.53
FUR4	YBR021W	RIM15	P43565	1770 aa		11.75	□□□□□ -0.53
FUR4	YBR021W	REI1	P38344	393 aa	Predicted RBP	11.75	□□□□□ -0.53
FUR4	YBR021W	RTT107	P38850	1070 aa		11.75	□□□□□ -0.53
FUR4	YBR021W	HAL5	P38970	855 aa	Known RBP	11.75	□□□□□ -0.53
FUR4	YBR021W	MGA2	P40578	1113 aa		11.75	□□□□□ -0.53
FUR4	YBR021W	MAL13	P53338	473 aa		11.75	□□□□□ -0.53
FUR4	YBR021W	VPS38	Q05919	439 aa		11.75	□□□□□ -0.53
FUR4	YBR021W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.75	□□□□□ -0.53	RIP-Chip
FUR4	YBR021W	PIF1	P07271	859 aa		11.74	□□□□□ -0.53
FUR4	YBR021W	SAC6	P32599	642 aa	Known RBP	11.74	□□□□□ -0.53
FUR4	YBR021W	NDC80	P40460	691 aa		11.74	□□□□□ -0.53
FUR4	YBR021W	GYL1	Q04322	720 aa		11.74	□□□□□ -0.53
FUR4	YBR021W	PPM2	Q08282	695 aa		11.74	□□□□□ -0.53
FUR4	YBR021W	POM152	P39685	1337 aa		11.74	□□□□□ -0.53
FUR4	YBR021W	FAS2	P19097	1887 aa	Known RBP	11.74	□□□□□ -0.53
FUR4	YBR021W	REB1	P21538	810 aa		11.74	□□□□□ -0.53
FUR4	YBR021W	GRX1	P25373	110 aa	Known RBP	11.74	□□□□□ -0.53
FUR4	YBR021W	STO1	P34160	861 aa	Known RBP	11.74	□□□□□ -0.53
FUR4	YBR021W	SAP190	P36123	1033 aa		11.74	□□□□□ -0.53
FUR4	YBR021W	AFT2	Q08957	416 aa		11.74	□□□□□ -0.53
FUR4	YBR021W	ENT1	Q12518	454 aa		11.74	□□□□□ -0.53
FUR4	YBR021W	YOL087C	Q99247	1116 aa		11.74	□□□□□ -0.53
FUR4	YBR021W	SWI4	P25302	1093 aa	Known RBP	11.73	□□□□□ -0.53
FUR4	YBR021W	MSH3	P25336	1018 aa		11.73	□□□□□ -0.53
FUR4	YBR021W	BMH2	P34730	273 aa	Known RBP	11.73	□□□□□ -0.53
FUR4	YBR021W	SEC9	P40357	651 aa		11.73	□□□□□ -0.53
FUR4	YBR021W	GET3	Q12154	354 aa	Known RBP	11.73	□□□□□ -0.53
FUR4	YBR021W	CDC6	P09119	513 aa		11.72	□□□□□ -0.53
FUR4	YBR021W	CCC2	P38995	1004 aa		11.72	□□□□□ -0.53
FUR4	YBR021W	CCT4	P39078	528 aa	Known RBP	11.72	□□□□□ -0.53
FUR4	YBR021W	ECM1	P39715	212 aa		11.72	□□□□□ -0.53
FUR4	YBR021W	YMR102C	Q03177	834 aa		11.72	□□□□□ -0.53
FUR4	YBR021W	YEL043W	P32618	956 aa		11.72	□□□□□ -0.53
FUR4	YBR021W	MED8	P38304	223 aa		11.72	□□□□□ -0.53
FUR4	YBR021W	IRC8	P47046	822 aa		11.72	□□□□□ -0.53
FUR4	YBR021W	BMH1	P29311	267 aa	Known RBP	11.71	□□□□□ -0.53
FUR4	YBR021W	YOL098C	Q12496	1037 aa		11.71	□□□□□ -0.53
FUR4	YBR021W	RPO26	P20435	155 aa		11.7	□□□□□ -0.54
FUR4	YBR021W	VPS1	P21576	704 aa	Known RBP	11.7	□□□□□ -0.54
FUR4	YBR021W	GDT1	P38301	280 aa	Predicted RBP	11.7	□□□□□ -0.54
FUR4	YBR021W	SEC65	P29478	273 aa		11.7	□□□□□ -0.54
FUR4	YBR021W	SER1	P33330	395 aa	Known RBP	11.7	□□□□□ -0.54
FUR4	YBR021W	ATG9	Q12142	997 aa		11.7	□□□□□ -0.54
FUR4	YBR021W	SEC23	P15303	768 aa	Known RBP	11.69	□□□□□ -0.54
FUR4	YBR021W	COQ1	P18900	473 aa		11.69	□□□□□ -0.54
FUR4	YBR021W	MCM3	P24279	971 aa	Known RBP	11.69	□□□□□ -0.54
FUR4	YBR021W	GLO3	P38682	493 aa	Known RBP	11.69	□□□□□ -0.54
FUR4	YBR021W	CSC1	Q06538	782 aa		11.69	□□□□□ -0.54
FUR4	YBR021W	ATG23	Q06671	453 aa		11.69	□□□□□ -0.54
FUR4	YBR021W	CTK3	P46963	296 aa	Predicted RBP	11.68	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 1141.9 ms