RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 CSB-PGBD3P0DP91 1061 aa13.04□□□□□ -0.32
PFDN6-205ENST00000395134 PRKAR2AP13861 404 aaKnown RBP13.04□□□□□ -0.32
PFDN6-205ENST00000395134 MICALL2Q8IY33 904 aa13.04□□□□□ -0.32
PFDN6-205ENST00000395134 MTMR14Q8NCE2 650 aa13.04□□□□□ -0.32
PFDN6-205ENST00000395134 FBXO31Q5XUX0 539 aaPredicted RBP13.03□□□□□ -0.32
PFDN6-205ENST00000395134 PPP2R2DQ66LE6 453 aa13.03□□□□□ -0.32
PFDN6-205ENST00000395134 PUS7Q96PZ0 661 aaKnown RBP13.03□□□□□ -0.32
PFDN6-205ENST00000395134 ZNF335Q9H4Z2 1342 aaPredicted RBP13.03□□□□□ -0.32
PFDN6-205ENST00000395134 A2ML1A8K2U0 1454 aa13.03□□□□□ -0.32
PFDN6-205ENST00000395134 RNF17Q9BXT8 1623 aaKnown RBP13.02□□□□□ -0.32
PFDN6-205ENST00000395134 CROCC2H7BZ55 1655 aa13.02□□□□□ -0.32
PFDN6-205ENST00000395134 ABL2P42684 1182 aa13.02□□□□□ -0.33
PFDN6-205ENST00000395134 KANK4Q5T7N3 995 aaPredicted RBP13.02□□□□□ -0.33
PFDN6-205ENST00000395134 UPF1Q92900 1129 aaKnown RBP eCLIP13.02□□□□□ -0.33
PFDN6-205ENST00000395134 PRM3Q9NNZ6 103 aa13.02□□□□□ -0.33
PFDN6-205ENST00000395134 USP35Q9P2H5 1018 aa13.02□□□□□ -0.33
PFDN6-205ENST00000395134 PLA2R1Q13018 1463 aa13.02□□□□□ -0.33
PFDN6-205ENST00000395134 TNRQ92752 1358 aa13.01□□□□□ -0.33
PFDN6-205ENST00000395134 PZPP20742 1482 aa13.01□□□□□ -0.33
PFDN6-205ENST00000395134 TCOF1Q13428 1488 aaKnown RBP13.01□□□□□ -0.33
PFDN6-205ENST00000395134 NEURL4Q96JN8 1562 aa13.01□□□□□ -0.33
PFDN6-205ENST00000395134 SPATA31D1Q6ZQQ2 1576 aa13□□□□□ -0.33
PFDN6-205ENST00000395134 MAST1Q9Y2H9 1570 aa13□□□□□ -0.33
PFDN6-205ENST00000395134 C2orf72A6NCS6 295 aa13□□□□□ -0.33
PFDN6-205ENST00000395134 SOCS7O14512 581 aa13□□□□□ -0.33
PFDN6-205ENST00000395134 SND1Q7KZF4 910 aaKnown RBP eCLIP13□□□□□ -0.33
PFDN6-205ENST00000395134 NPDC1Q9NQX5 325 aaPredicted RBP13□□□□□ -0.33
PFDN6-205ENST00000395134 ZC3H13Q5T200 1668 aaKnown RBP12.99□□□□□ -0.33
PFDN6-205ENST00000395134 WASHC2CQ9Y4E1 1318 aa12.99□□□□□ -0.33
PFDN6-205ENST00000395134 KIF3CO14782 793 aa12.99□□□□□ -0.33
PFDN6-205ENST00000395134 IVNS1ABPQ9Y6Y0 642 aa12.99□□□□□ -0.33
PFDN6-205ENST00000395134 MROH1Q8NDA8 1641 aa12.99□□□□□ -0.33
PFDN6-205ENST00000395134 ABCC3O15438 1527 aa12.98□□□□□ -0.33
PFDN6-205ENST00000395134 MYOM3Q5VTT5 1437 aa12.98□□□□□ -0.33
PFDN6-205ENST00000395134 DISP3Q9P2K9 1392 aa12.98□□□□□ -0.33
PFDN6-205ENST00000395134 CDK11BP21127 795 aaKnown RBP12.98□□□□□ -0.33
PFDN6-205ENST00000395134 DIXDC1Q155Q3 683 aa12.98□□□□□ -0.33
PFDN6-205ENST00000395134 PELP1Q8IZL8 1130 aaKnown RBP12.98□□□□□ -0.33
PFDN6-205ENST00000395134 TBC1D2Q9BYX2 928 aa12.98□□□□□ -0.33
PFDN6-205ENST00000395134 EIF2AK4Q9P2K8 1649 aaKnown RBP12.98□□□□□ -0.33
PFDN6-205ENST00000395134 FAM135AQ9P2D6 1515 aa12.98□□□□□ -0.33
PFDN6-205ENST00000395134 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.97□□□□□ -0.33
PFDN6-205ENST00000395134 TSPY4P0CV99 314 aa12.97□□□□□ -0.33
PFDN6-205ENST00000395134 TSPY10P0CW01 314 aa12.97□□□□□ -0.33
PFDN6-205ENST00000395134 SRPK2P78362 688 aaKnown RBP12.97□□□□□ -0.33
PFDN6-205ENST00000395134 PTPN23Q9H3S7 1636 aa12.97□□□□□ -0.33
PFDN6-205ENST00000395134 RFX1P22670 979 aa12.96□□□□□ -0.33
PFDN6-205ENST00000395134 DPY19L2Q6NUT2 758 aa12.96□□□□□ -0.33
PFDN6-205ENST00000395134 IQSEC2Q5JU85 1478 aa12.96□□□□□ -0.34
PFDN6-205ENST00000395134 MAP3K1Q13233 1512 aa12.95□□□□□ -0.34
PFDN6-205ENST00000395134 UBAP1LF5GYI3 381 aa12.95□□□□□ -0.34
PFDN6-205ENST00000395134 CDHR5Q9HBB8 845 aa12.95□□□□□ -0.34
PFDN6-205ENST00000395134 IQGAP1P46940 1657 aa12.95□□□□□ -0.34
PFDN6-205ENST00000395134 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.94□□□□□ -0.34
PFDN6-205ENST00000395134 UGGT1Q9NYU2 1555 aa12.94□□□□□ -0.34
PFDN6-205ENST00000395134 RSPH4AQ5TD94 716 aa12.94□□□□□ -0.34
PFDN6-205ENST00000395134 TRPC6Q9Y210 931 aa12.94□□□□□ -0.34
PFDN6-205ENST00000395134 STRCP1A6NGW2 1772 aa12.94□□□□□ -0.34
PFDN6-205ENST00000395134 EVI5O60447 810 aa12.93□□□□□ -0.34
PFDN6-205ENST00000395134 LIMD1Q9UGP4 676 aa12.93□□□□□ -0.34
PFDN6-205ENST00000395134 TBC1D2BQ9UPU7 963 aa12.93□□□□□ -0.34
PFDN6-205ENST00000395134 UBR1Q8IWV7 1749 aa12.93□□□□□ -0.34
PFDN6-205ENST00000395134 ERVK-7P63135 1459 aa12.92□□□□□ -0.34
PFDN6-205ENST00000395134 CACNB1Q02641 598 aaPredicted RBP12.92□□□□□ -0.34
PFDN6-205ENST00000395134 CFAP70Q5T0N1 1121 aa12.92□□□□□ -0.34
PFDN6-205ENST00000395134 HDGFL1Q5TGJ6 251 aa12.92□□□□□ -0.34
PFDN6-205ENST00000395134 MIA2Q96PC5 1412 aa12.92□□□□□ -0.34
PFDN6-205ENST00000395134 PHF12Q96QT6 1004 aa12.92□□□□□ -0.34
PFDN6-205ENST00000395134 ZRANB1Q9UGI0 708 aa12.92□□□□□ -0.34
PFDN6-205ENST00000395134 DUOX2Q9NRD8 1548 aa12.92□□□□□ -0.34
PFDN6-205ENST00000395134 NLRP1Q9C000 1473 aa12.91□□□□□ -0.34
PFDN6-205ENST00000395134 VWDEQ8N2E2 1590 aa12.91□□□□□ -0.34
PFDN6-205ENST00000395134 CARNS1A5YM72 827 aa12.91□□□□□ -0.34
PFDN6-205ENST00000395134 ILDR2Q71H61 639 aa12.91□□□□□ -0.34
PFDN6-205ENST00000395134 KIF15Q9NS87 1388 aa12.91□□□□□ -0.34
PFDN6-205ENST00000395134 OATP04181 439 aa12.9□□□□□ -0.34
PFDN6-205ENST00000395134 METTL3Q86U44 580 aaKnown RBP12.9□□□□□ -0.34
PFDN6-205ENST00000395134 VRTNQ9H8Y1 702 aa12.9□□□□□ -0.34
PFDN6-205ENST00000395134 DEPDC5O75140 1603 aa12.9□□□□□ -0.34
PFDN6-205ENST00000395134 ABCC5O15440 1437 aa12.89□□□□□ -0.35
PFDN6-205ENST00000395134 PRDM15P57071 1507 aaPredicted RBP12.89□□□□□ -0.35
PFDN6-205ENST00000395134 TUSC1Q2TAM9 212 aa12.89□□□□□ -0.35
PFDN6-205ENST00000395134 SHANK2Q9UPX8 1470 aa12.89□□□□□ -0.35
PFDN6-205ENST00000395134 NPHP4O75161 1426 aaPredicted RBP12.88□□□□□ -0.35
PFDN6-205ENST00000395134 UNCXA6NJT0 531 aa12.88□□□□□ -0.35
PFDN6-205ENST00000395134 PIP4K2BP78356 416 aa12.88□□□□□ -0.35
PFDN6-205ENST00000395134 EN1Q05925 392 aaPredicted RBP12.88□□□□□ -0.35
PFDN6-205ENST00000395134 RIC3Q7Z5B4 369 aa12.88□□□□□ -0.35
PFDN6-205ENST00000395134 RRP7BPQ9NSQ0 103 aa12.88□□□□□ -0.35
PFDN6-205ENST00000395134 CPS1P31327 1500 aa12.88□□□□□ -0.35
PFDN6-205ENST00000395134 DAPK1P53355 1430 aa12.88□□□□□ -0.35
PFDN6-205ENST00000395134 FGD6Q6ZV73 1430 aa12.88□□□□□ -0.35
PFDN6-205ENST00000395134 ANKLE2Q86XL3 938 aa12.87□□□□□ -0.35
PFDN6-205ENST00000395134 ADAMTS19Q8TE59 1207 aa12.87□□□□□ -0.35
PFDN6-205ENST00000395134 NLRP7Q8WX94 980 aa12.87□□□□□ -0.35
PFDN6-205ENST00000395134 MYO5BQ9ULV0 1848 aa12.87□□□□□ -0.35
PFDN6-205ENST00000395134 PIK3C2BO00750 1634 aa12.87□□□□□ -0.35
PFDN6-205ENST00000395134 THEMISQ8N1K5 641 aaPredicted RBP12.86□□□□□ -0.35
PFDN6-205ENST00000395134 TMEM121BQ9BXQ6 578 aaPredicted RBP12.86□□□□□ -0.35
PFDN6-205ENST00000395134 IGSF5Q9NSI5 407 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms