RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 CHIC1Q5VXU3 224 aa25.15■■□□□ 1.62
PFDN6-205ENST00000395134 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
PFDN6-205ENST00000395134 PHF23Q9BUL5 403 aaPredicted RBP22.31■■□□□ 1.16
PFDN6-205ENST00000395134 PLPPR3Q6T4P5 718 aa21.08■□□□□ 0.97
PFDN6-205ENST00000395134 NISCHQ9Y2I1 1504 aa20.6■□□□□ 0.89
PFDN6-205ENST00000395134 EHMT2Q96KQ7 1210 aa20.52■□□□□ 0.88
PFDN6-205ENST00000395134 SENP3Q9H4L4 574 aaPredicted RBP20.31■□□□□ 0.84
PFDN6-205ENST00000395134 KCNA4P22459 653 aa20.05■□□□□ 0.8
PFDN6-205ENST00000395134 ADRA2BP18089 450 aa19.7■□□□□ 0.74
PFDN6-205ENST00000395134 CSRNP3Q8WYN3 585 aa19.63■□□□□ 0.73
PFDN6-205ENST00000395134 SLC24A1O60721 1099 aa19.36■□□□□ 0.69
PFDN6-205ENST00000395134 SLC4A1APQ9BWU0 796 aaKnown RBP19.35■□□□□ 0.69
PFDN6-205ENST00000395134 PPP6R1Q9UPN7 881 aa19.19■□□□□ 0.66
PFDN6-205ENST00000395134 PPP4R3CPQ6ZMV5 832 aa18.78■□□□□ 0.6
PFDN6-205ENST00000395134 RTN4Q9NQC3 1192 aaKnown RBP18.73■□□□□ 0.59
PFDN6-205ENST00000395134 NCBP3Q53F19 620 aaKnown RBP18.71■□□□□ 0.59
PFDN6-205ENST00000395134 AMER1Q5JTC6 1135 aaPredicted RBP18.71■□□□□ 0.59
PFDN6-205ENST00000395134 FOXD1Q16676 465 aa18.69■□□□□ 0.58
PFDN6-205ENST00000395134 ABCC9O60706 1549 aa18.57■□□□□ 0.56
PFDN6-205ENST00000395134 CCDC180Q9P1Z9 1646 aa18.54■□□□□ 0.56
PFDN6-205ENST00000395134 ZBTB22O15209 634 aa18.48■□□□□ 0.55
PFDN6-205ENST00000395134 NPM3O75607 178 aaKnown RBP18.45■□□□□ 0.54
PFDN6-205ENST00000395134 FOXD4L1Q9NU39 408 aa18.01■□□□□ 0.47
PFDN6-205ENST00000395134 PIAS4Q8N2W9 510 aaPredicted RBP17.97■□□□□ 0.47
PFDN6-205ENST00000395134 CNKSR2Q8WXI2 1034 aa17.91■□□□□ 0.46
PFDN6-205ENST00000395134 DNAJC5BQ9UF47 199 aa17.7■□□□□ 0.42
PFDN6-205ENST00000395134 FKBP8Q14318 412 aa17.63■□□□□ 0.41
PFDN6-205ENST00000395134 RB1CC1Q8TDY2 1594 aa17.62■□□□□ 0.41
PFDN6-205ENST00000395134 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
PFDN6-205ENST00000395134 NACADO15069 1562 aa17.46■□□□□ 0.39
PFDN6-205ENST00000395134 DCAF8L2P0C7V8 631 aa17.44■□□□□ 0.38
PFDN6-205ENST00000395134 UNC13AQ9UPW8 1703 aa17.41■□□□□ 0.38
PFDN6-205ENST00000395134 PABPN1Q86U42 306 aaKnown RBP eCLIP17.27■□□□□ 0.36
PFDN6-205ENST00000395134 ATXN8OSP0DMR3 200 aa17.26■□□□□ 0.35
PFDN6-205ENST00000395134 PLCB2Q00722 1185 aa17.19■□□□□ 0.34
PFDN6-205ENST00000395134 RNF216Q9NWF9 866 aaPredicted RBP17.19■□□□□ 0.34
PFDN6-205ENST00000395134 BICRAQ9NZM4 1560 aa17.14■□□□□ 0.33
PFDN6-205ENST00000395134 MYO15BQ96JP2 1530 aa17.12■□□□□ 0.33
PFDN6-205ENST00000395134 ZCCHC6Q5VYS8 1495 aaKnown RBP17.09■□□□□ 0.33
PFDN6-205ENST00000395134 SLC4A2P04920 1241 aa17.06■□□□□ 0.32
PFDN6-205ENST00000395134 PRKCSHP14314 528 aaPredicted RBP17.05■□□□□ 0.32
PFDN6-205ENST00000395134 BCANQ96GW7 911 aa17.04■□□□□ 0.32
PFDN6-205ENST00000395134 MAPK8IP2Q13387 824 aaPredicted RBP17.03■□□□□ 0.32
PFDN6-205ENST00000395134 MYCNP04198 464 aaPredicted RBP17■□□□□ 0.31
PFDN6-205ENST00000395134 SCRIBQ14160 1630 aa16.99■□□□□ 0.31
PFDN6-205ENST00000395134 HAP1P54257 671 aaPredicted RBP16.94■□□□□ 0.3
PFDN6-205ENST00000395134 DCAF1Q9Y4B6 1507 aa16.94■□□□□ 0.3
PFDN6-205ENST00000395134 TAOK2Q9UL54 1235 aa16.93■□□□□ 0.3
PFDN6-205ENST00000395134 CC2D2AQ9P2K1 1620 aa16.78■□□□□ 0.28
PFDN6-205ENST00000395134 SHROOM4Q9ULL8 1493 aa16.77■□□□□ 0.28
PFDN6-205ENST00000395134 VSIG10Q8N0Z9 540 aa16.75■□□□□ 0.27
PFDN6-205ENST00000395134 HOXD11P31277 338 aaPredicted RBP16.72■□□□□ 0.27
PFDN6-205ENST00000395134 EIF4G1Q04637 1599 aaKnown RBP16.71■□□□□ 0.27
PFDN6-205ENST00000395134 CECR2Q9BXF3 1484 aa16.68■□□□□ 0.26
PFDN6-205ENST00000395134 TPRNQ4KMQ1 711 aa16.63■□□□□ 0.25
PFDN6-205ENST00000395134 MSH5O43196 834 aa16.61■□□□□ 0.25
PFDN6-205ENST00000395134 FBXO3Q9UK99 471 aa16.58■□□□□ 0.24
PFDN6-205ENST00000395134 DMRT2Q9Y5R5 561 aa16.47■□□□□ 0.23
PFDN6-205ENST00000395134 ATF5Q9Y2D1 282 aaPredicted RBP16.46■□□□□ 0.23
PFDN6-205ENST00000395134 KDM2AQ9Y2K7 1162 aa16.39■□□□□ 0.21
PFDN6-205ENST00000395134 VASPP50552 380 aaPredicted RBP16.32■□□□□ 0.2
PFDN6-205ENST00000395134 DAXXQ9UER7 740 aaPredicted RBP16.3■□□□□ 0.2
PFDN6-205ENST00000395134 PKD2Q13563 968 aa16.27■□□□□ 0.2
PFDN6-205ENST00000395134 FBLN2P98095 1184 aa16.25■□□□□ 0.19
PFDN6-205ENST00000395134 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.25■□□□□ 0.19
PFDN6-205ENST00000395134 TIMELESSQ9UNS1 1208 aa16.25■□□□□ 0.19
PFDN6-205ENST00000395134 IFNLR1Q8IU57 520 aaPredicted RBP16.23■□□□□ 0.19
PFDN6-205ENST00000395134 BBXQ8WY36 941 aaPredicted RBP16.22■□□□□ 0.19
PFDN6-205ENST00000395134 SPDYE4A6NLX3 237 aa16.18■□□□□ 0.18
PFDN6-205ENST00000395134 ARXQ96QS3 562 aa16.18■□□□□ 0.18
PFDN6-205ENST00000395134 SAMD1Q6SPF0 538 aaPredicted RBP16.16■□□□□ 0.18
PFDN6-205ENST00000395134 TULP1O00294 542 aaPredicted RBP16.15■□□□□ 0.18
PFDN6-205ENST00000395134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.14■□□□□ 0.17
PFDN6-205ENST00000395134 HNRNPUL2Q1KMD3 747 aaKnown RBP16.14■□□□□ 0.17
PFDN6-205ENST00000395134 PAXIP1Q6ZW49 1069 aaPredicted RBP16.14■□□□□ 0.17
PFDN6-205ENST00000395134 PROM2Q8N271 834 aa16.14■□□□□ 0.17
PFDN6-205ENST00000395134 SMARCA4P51532 1647 aa16.14■□□□□ 0.17
PFDN6-205ENST00000395134 CFAP44Q96MT7 982 aa16.09■□□□□ 0.17
PFDN6-205ENST00000395134 ATAD2BQ9ULI0 1458 aa16.08■□□□□ 0.16
PFDN6-205ENST00000395134 NCAPD3P42695 1498 aa16.07■□□□□ 0.16
PFDN6-205ENST00000395134 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
PFDN6-205ENST00000395134 GTF3C3Q9Y5Q9 886 aa16.04■□□□□ 0.16
PFDN6-205ENST00000395134 NPM1P06748 294 aaKnown RBP eCLIP16.02■□□□□ 0.16
PFDN6-205ENST00000395134 HMGXB3Q12766 1538 aa16.02■□□□□ 0.15
PFDN6-205ENST00000395134 ERCC6Q03468 1493 aa16.02■□□□□ 0.15
PFDN6-205ENST00000395134 ERICH6Q7L0X2 663 aa16.01■□□□□ 0.15
PFDN6-205ENST00000395134 BAZ1AQ9NRL2 1556 aaPredicted RBP16■□□□□ 0.15
PFDN6-205ENST00000395134 ZNF219Q9P2Y4 722 aaPredicted RBP15.99■□□□□ 0.15
PFDN6-205ENST00000395134 NESP48681 1621 aa15.97■□□□□ 0.15
PFDN6-205ENST00000395134 BAZ1BQ9UIG0 1483 aaKnown RBP15.97■□□□□ 0.15
PFDN6-205ENST00000395134 TSHZ2Q9NRE2 1034 aa15.94■□□□□ 0.14
PFDN6-205ENST00000395134 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.93■□□□□ 0.142e-9■□□□□ 9.3
PFDN6-205ENST00000395134 MROH2BQ7Z745 1585 aa15.92■□□□□ 0.14
PFDN6-205ENST00000395134 SPRYD3Q8NCJ5 442 aa15.92■□□□□ 0.14
PFDN6-205ENST00000395134 CUX2O14529 1486 aa15.91■□□□□ 0.14
PFDN6-205ENST00000395134 PEG3Q9GZU2 1588 aa15.89■□□□□ 0.13
PFDN6-205ENST00000395134 ECM2O94769 699 aaPredicted RBP15.88■□□□□ 0.13
PFDN6-205ENST00000395134 NBR1Q14596 966 aa15.87■□□□□ 0.13
PFDN6-205ENST00000395134 DNAJC5Q9H3Z4 198 aa15.85■□□□□ 0.13
PFDN6-205ENST00000395134 KIF21AQ7Z4S6 1674 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms