RNA–Protein interactions for RNA: ENSMUST00000207054.1

Smarca2-220, Transcript of Probable global transcription activator SNF2L2, mousemouse

TSL 5 BASIC

Gene Smarca2, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2-220ENSMUST00000207054 Rgs9O54828 675 aa6.23□□□□□ -1.41
Smarca2-220ENSMUST00000207054 Mre11Q61216 706 aa6.23□□□□□ -1.41
Smarca2-220ENSMUST00000207054 ClmQ7TSN2 230 aa6.23□□□□□ -1.41
Smarca2-220ENSMUST00000207054 Ddrgk1Q80WW9 315 aa6.23□□□□□ -1.41
Smarca2-220ENSMUST00000207054 Ptcd1Q8C2E4 695 aaKnown RBP6.23□□□□□ -1.41
Smarca2-220ENSMUST00000207054 Mknk2Q8CDB0 459 aa6.23□□□□□ -1.41
Smarca2-220ENSMUST00000207054 Ccdc38Q8CDN8 563 aa6.23□□□□□ -1.41
Smarca2-220ENSMUST00000207054 SmapQ9R0P4 181 aaKnown RBP6.23□□□□□ -1.41
Smarca2-220ENSMUST00000207054 OatP29758 439 aa6.22□□□□□ -1.41
Smarca2-220ENSMUST00000207054 Q4VA45 678 aa6.22□□□□□ -1.41
Smarca2-220ENSMUST00000207054 Mctp2Q5RJH2 878 aa6.22□□□□□ -1.41
Smarca2-220ENSMUST00000207054 Dnajc5gQ8C632 165 aa6.22□□□□□ -1.41
Smarca2-220ENSMUST00000207054 Rmi1Q9D4G9 616 aa6.22□□□□□ -1.41
Smarca2-220ENSMUST00000207054 Rnf25Q9QZR0 456 aa6.22□□□□□ -1.41
Smarca2-220ENSMUST00000207054 Lhx6Q9R1R0 363 aa6.22□□□□□ -1.41
Smarca2-220ENSMUST00000207054 Ca8P28651 291 aa6.22□□□□□ -1.41
Smarca2-220ENSMUST00000207054 VgfQ0VGU4 617 aa6.22□□□□□ -1.41
Smarca2-220ENSMUST00000207054 Exoc8Q6PGF7 716 aa6.22□□□□□ -1.41
Smarca2-220ENSMUST00000207054 Dhx16G3X8X0 1044 aaKnown RBP6.21□□□□□ -1.41
Smarca2-220ENSMUST00000207054 Capn2O08529 700 aa6.21□□□□□ -1.41
Smarca2-220ENSMUST00000207054 Hoxa2P31245 372 aa6.21□□□□□ -1.41
Smarca2-220ENSMUST00000207054 1700122O11RikJ3QPW6 241 aa6.21□□□□□ -1.42
Smarca2-220ENSMUST00000207054 NudcO35685 332 aaKnown RBP6.21□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Il4rP16382 810 aa6.21□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Tbc1d12Q6A039 696 aa6.21□□□□□ -1.42
Smarca2-220ENSMUST00000207054 FcrlaQ920A9 352 aa6.21□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Krtap28-13A0A087WQP5 138 aa6.2□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Ankrd49Q8VE42 238 aa6.2□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Pcdhgb4Q91XX6 912 aa6.2□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Rpap1Q80TE0 1409 aa6.2□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Pcdh10E9PXQ7 1057 aa6.2□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Rbm46P86049 533 aa6.2□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Ints3Q7TPD0 1041 aaKnown RBP6.2□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Apbb1ipQ8R5A3 670 aa6.2□□□□□ -1.42
Smarca2-220ENSMUST00000207054 TsksO54887 585 aa6.19□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Atp2b3Q0VF55 1220 aa6.19□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Erich6bQ9D4S6 220 aa6.19□□□□□ -1.42
Smarca2-220ENSMUST00000207054 TrdnE9Q9K5 693 aa6.19□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Cyp8b1O88962 500 aa6.18□□□□□ -1.42
Smarca2-220ENSMUST00000207054 R3hcc1Q8BSI6 488 aa6.18□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Paf1Q8K2T8 535 aa6.18□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Sf3a1Q8K4Z5 791 aaKnown RBP6.18□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Arhgef5E9Q7D5 1581 aa6.18□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Rapgef2Q8CHG7 1496 aa6.18□□□□□ -1.42
Smarca2-220ENSMUST00000207054 A030005K14RikA0A1Y7VNY1 122 aa6.17□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Ccdc173A0JLY1 547 aa6.17□□□□□ -1.42
Smarca2-220ENSMUST00000207054 PnisrA2AJT4 805 aaKnown RBP6.17□□□□□ -1.42
Smarca2-220ENSMUST00000207054 PsdQ5DTT2 1024 aa6.17□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Trim44Q9QXA7 346 aa6.17□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Kcnh8P59111 1102 aa6.17□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Cep126Q0VBV7 1103 aa6.17□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Tnpo1Q8BFY9 898 aaKnown RBP6.17□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Lmod2Q3UHZ5 550 aa6.16□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Ccdc34Q3UI66 367 aa6.16□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Gm20503G3UZK1 150 aa6.16□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Map7O88735 730 aa6.16□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Myo1bP46735 1107 aa6.16□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Bank1Q80VH0 783 aa6.16□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Rem2Q8VEL9 341 aa6.16□□□□□ -1.42
Smarca2-220ENSMUST00000207054 LrgukQ9D5S7 820 aa6.16□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Msh5Q9QUM7 833 aa6.16□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Hdac6Q9Z2V5 1149 aa6.16□□□□□ -1.42
Smarca2-220ENSMUST00000207054 March10E9PX79 788 aa6.15□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Gm973E9Q295 1059 aa6.15□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Cux2P70298 1426 aa6.15□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Klra5Q60652 266 aa6.15□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Lamc3Q9R0B6 1581 aa6.15□□□□□ -1.42
Smarca2-220ENSMUST00000207054 Anapc15-psA0A140T8L6 141 aa6.15□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Tnnt1O88346 262 aa6.15□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Pcdhb16Q91Y03 802 aa6.15□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Slc5a4bQ91ZP4 660 aa6.15□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Cep83Q9D5R3 692 aa6.15□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Top2aQ01320 1528 aaKnown RBP6.14□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Rusc2Q80U22 1514 aa6.14□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Efcab5A0JP43 1406 aa6.14□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Traf1P39428 409 aa6.14□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Slc20a2Q80UP8 656 aa6.14□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Rccd1Q8BTU7 377 aa6.14□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Dnai1Q8C0M8 701 aa6.14□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Phc3Q8CHP6 981 aa6.14□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Pes1Q9EQ61 584 aaKnown RBP6.14□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Q9CQ90 155 aa6.14□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Mtmr7Q9Z2C9 660 aa6.14□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Fmn1Q05860 1466 aa6.13□□□□□ -1.43
Smarca2-220ENSMUST00000207054 HalP35492 657 aa6.13□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Sugt1Q9CX34 336 aa6.13□□□□□ -1.43
Smarca2-220ENSMUST00000207054 MecomP14404 1042 aa6.13□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Cct2P80314 535 aaKnown RBP6.13□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Pabpn1Q8CCS6 302 aaKnown RBP6.13□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Otud6bQ8K2H2 294 aa6.13□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Fxr2Q9WVR4 673 aaKnown RBP6.13□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Fbxw10Q5SUS0 1030 aa6.12□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Ppm1gQ61074 542 aa6.12□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Atl2Q6PA06 583 aa6.12□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Tspyl2Q7TQI8 677 aa6.12□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Arid5bQ8BM75 1188 aaKnown RBP6.12□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Vps53Q8CCB4 832 aa6.12□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Pus7B7ZNL8 666 aaKnown RBP6.11□□□□□ -1.43
Smarca2-220ENSMUST00000207054 NmiO35309 314 aa6.11□□□□□ -1.43
Smarca2-220ENSMUST00000207054 Fmr1nbQ80ZA7 238 aa6.11□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 56.5 ms