Protein–RNA interactions for Protein: Q9QZR0

Rnf25, E3 ubiquitin-protein ligase RNF25, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf25Q9QZR0 Gm25239-201ENSMUST00000174915 86 ntBASIC39.41■■■■□ 3.9
Rnf25Q9QZR0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
Rnf25Q9QZR0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.16■■■■□ 3.38
Rnf25Q9QZR0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
Rnf25Q9QZR0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Rnf25Q9QZR0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.51■■■■□ 3.28
Rnf25Q9QZR0 Gm15042-201ENSMUST00000120212 883 ntBASIC34.95■■■■□ 3.19
Rnf25Q9QZR0 Gm15045-201ENSMUST00000117359 883 ntBASIC34.37■■■■□ 3.09
Rnf25Q9QZR0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Rnf25Q9QZR0 Psd-208ENSMUST00000224556 2034 ntBASIC34.13■■■■□ 3.05
Rnf25Q9QZR0 Gm24109-201ENSMUST00000175489 103 ntBASIC33.99■■■■□ 3.03
Rnf25Q9QZR0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Rnf25Q9QZR0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.6■■■□□ 2.97
Rnf25Q9QZR0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
Rnf25Q9QZR0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Rnf25Q9QZR0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.27■■■□□ 2.92
Rnf25Q9QZR0 Gm23366-201ENSMUST00000175022 89 ntBASIC32.96■■■□□ 2.87
Rnf25Q9QZR0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
Rnf25Q9QZR0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
Rnf25Q9QZR0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
Rnf25Q9QZR0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
Rnf25Q9QZR0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Rnf25Q9QZR0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Rnf25Q9QZR0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.81■■■□□ 2.84
Rnf25Q9QZR0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Rnf25Q9QZR0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Rnf25Q9QZR0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Rnf25Q9QZR0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.72■■■□□ 2.83
Rnf25Q9QZR0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Rnf25Q9QZR0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Rnf25Q9QZR0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.37■■■□□ 2.77
Rnf25Q9QZR0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Rnf25Q9QZR0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Rnf25Q9QZR0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
Rnf25Q9QZR0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Rnf25Q9QZR0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Rnf25Q9QZR0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.04■■■□□ 2.72
Rnf25Q9QZR0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Rnf25Q9QZR0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
Rnf25Q9QZR0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Rnf25Q9QZR0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.78■■■□□ 2.68
Rnf25Q9QZR0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Rnf25Q9QZR0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.45■■■□□ 2.63
Rnf25Q9QZR0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Rnf25Q9QZR0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Rnf25Q9QZR0 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.37■■■□□ 2.61
Rnf25Q9QZR0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.32■■■□□ 2.6
Rnf25Q9QZR0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rnf25Q9QZR0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rnf25Q9QZR0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Rnf25Q9QZR0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Rnf25Q9QZR0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rnf25Q9QZR0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Rnf25Q9QZR0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Rnf25Q9QZR0 Gm25238-201ENSMUST00000174914 89 ntBASIC30.97■■■□□ 2.55
Rnf25Q9QZR0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
Rnf25Q9QZR0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Rnf25Q9QZR0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.91■■■□□ 2.54
Rnf25Q9QZR0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Rnf25Q9QZR0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rnf25Q9QZR0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.81■■■□□ 2.52
Rnf25Q9QZR0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.81■■■□□ 2.52
Rnf25Q9QZR0 Gm27325-201ENSMUST00000175467 74 ntBASIC30.79■■■□□ 2.52
Rnf25Q9QZR0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Rnf25Q9QZR0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.75■■■□□ 2.51
Rnf25Q9QZR0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Rnf25Q9QZR0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Rnf25Q9QZR0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Rnf25Q9QZR0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
Rnf25Q9QZR0 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.69■■■□□ 2.5
Rnf25Q9QZR0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.66■■■□□ 2.5
Rnf25Q9QZR0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.56■■■□□ 2.48
Rnf25Q9QZR0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Rnf25Q9QZR0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.41■■■□□ 2.46
Rnf25Q9QZR0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Rnf25Q9QZR0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Rnf25Q9QZR0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.26■■■□□ 2.44
Rnf25Q9QZR0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Rnf25Q9QZR0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Rnf25Q9QZR0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.15■■■□□ 2.42
Rnf25Q9QZR0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.13■■■□□ 2.41
Rnf25Q9QZR0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Rnf25Q9QZR0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Rnf25Q9QZR0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Rnf25Q9QZR0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.08■■■□□ 2.41
Rnf25Q9QZR0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Rnf25Q9QZR0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
Rnf25Q9QZR0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Rnf25Q9QZR0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
Rnf25Q9QZR0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Rnf25Q9QZR0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Rnf25Q9QZR0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Rnf25Q9QZR0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Rnf25Q9QZR0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Rnf25Q9QZR0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Rnf25Q9QZR0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
Rnf25Q9QZR0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Rnf25Q9QZR0 Rab21-202ENSMUST00000218831 843 ntBASIC29.84■■■□□ 2.37
Rnf25Q9QZR0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.82■■■□□ 2.36
Rnf25Q9QZR0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms