RNA–Protein interactions for RNA: YOR259C

RPT4, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT4YOR259C YDL144CQ07589 356 aa6.69□□□□□ -1.34
RPT4YOR259C ADE6P38972 1358 aaKnown RBP6.68□□□□□ -1.34
RPT4YOR259C MAK16P10962 306 aaPredicted RBP6.68□□□□□ -1.34
RPT4YOR259C VAC17P25591 423 aa6.67□□□□□ -1.34
RPT4YOR259C MET32Q12041 191 aa6.67□□□□□ -1.34
RPT4YOR259C YIL177CP40434 1758 aa6.66□□□□□ -1.34
RPT4YOR259C YJL225CP40889 1758 aa6.66□□□□□ -1.34
RPT4YOR259C LEU2P04173 364 aaPredicted RBP6.66□□□□□ -1.34
RPT4YOR259C PKC1P24583 1151 aa6.66□□□□□ -1.34
RPT4YOR259C KIP2P28743 706 aa6.66□□□□□ -1.34
RPT4YOR259C MTR4P47047 1073 aaKnown RBP6.66□□□□□ -1.34
RPT4YOR259C RRP5Q05022 1729 aaKnown RBP6.65□□□□□ -1.34
RPT4YOR259C IXR1P33417 597 aa6.65□□□□□ -1.35
RPT4YOR259C CSE4P36012 229 aa6.65□□□□□ -1.35
RPT4YOR259C YBL036CP38197 257 aa6.65□□□□□ -1.35
RPT4YOR259C SUI2P20459 304 aaKnown RBP6.64□□□□□ -1.35
RPT4YOR259C FIG4P42837 879 aa6.64□□□□□ -1.35
RPT4YOR259C YEF3P16521 1044 aaKnown RBP6.63□□□□□ -1.35
RPT4YOR259C SNF7P39929 240 aaKnown RBP6.63□□□□□ -1.35
RPT4YOR259C SNF2P22082 1703 aa6.63□□□□□ -1.35
RPT4YOR259C PDI1P17967 522 aaKnown RBP6.62□□□□□ -1.35
RPT4YOR259C TEC1P18412 486 aa6.62□□□□□ -1.35
RPT4YOR259C MPP10P47083 593 aaKnown RBP6.62□□□□□ -1.35
RPT4YOR259C YRB30P53107 440 aaPredicted RBP6.62□□□□□ -1.35
RPT4YOR259C PRP43P53131 767 aaKnown RBP6.62□□□□□ -1.35
RPT4YOR259C NAF1P53919 492 aaKnown RBP6.62□□□□□ -1.35
RPT4YOR259C AUS1Q08409 1394 aa6.61□□□□□ -1.35
RPT4YOR259C RPS24AP0CX31 135 aaKnown RBP6.61□□□□□ -1.35
RPT4YOR259C RPS24BP0CX32 135 aaKnown RBP6.61□□□□□ -1.35
RPT4YOR259C AFT1P22149 690 aa6.61□□□□□ -1.35
RPT4YOR259C YIR014WP40570 242 aa6.61□□□□□ -1.35
RPT4YOR259C BRE2P43132 505 aa6.61□□□□□ -1.35
RPT4YOR259C TAP42Q04372 366 aa6.61□□□□□ -1.35
RPT4YOR259C YRF1-2P40105 1681 aa6.61□□□□□ -1.35
RPT4YOR259C SPT5P27692 1063 aaKnown RBP6.6□□□□□ -1.35
RPT4YOR259C ASH1P34233 588 aa6.6□□□□□ -1.35
RPT4YOR259C MNN4P36044 1178 aa6.6□□□□□ -1.35
RPT4YOR259C HGH1P48362 394 aaKnown RBP6.6□□□□□ -1.35
RPT4YOR259C YPR084WQ06821 456 aa6.6□□□□□ -1.35
RPT4YOR259C FKS3Q04952 1785 aa6.6□□□□□ -1.35
RPT4YOR259C URB1P34241 1764 aaKnown RBP6.59□□□□□ -1.35
RPT4YOR259C BIO2P32451 375 aa6.59□□□□□ -1.35
RPT4YOR259C MRT4P33201 236 aaKnown RBP6.59□□□□□ -1.35
RPT4YOR259C DJP1P40564 432 aa6.59□□□□□ -1.35
RPT4YOR259C HST3P53687 447 aa6.59□□□□□ -1.35
RPT4YOR259C KAR2P16474 682 aaKnown RBP6.58□□□□□ -1.36
RPT4YOR259C ROX1P25042 368 aa6.58□□□□□ -1.36
RPT4YOR259C GRX4P32642 244 aa6.58□□□□□ -1.36
RPT4YOR259C HIM1Q06674 414 aa6.58□□□□□ -1.36
RPT4YOR259C RAD2P07276 1031 aa6.57□□□□□ -1.36
RPT4YOR259C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
RPT4YOR259C GAS4Q08271 471 aa6.57□□□□□ -1.36
RPT4YOR259C PCT1P13259 424 aa6.56□□□□□ -1.36
RPT4YOR259C PRP45P28004 379 aaPredicted RBP6.56□□□□□ -1.36
RPT4YOR259C GUT2P32191 649 aa6.56□□□□□ -1.36
RPT4YOR259C TCB2P48231 1178 aa6.56□□□□□ -1.36
RPT4YOR259C GCR2Q01722 534 aa6.56□□□□□ -1.36
RPT4YOR259C IOC4Q04213 475 aa6.56□□□□□ -1.36
RPT4YOR259C APC1P53886 1748 aa6.56□□□□□ -1.36
RPT4YOR259C PRP5P21372 849 aaPredicted RBP6.55□□□□□ -1.36
RPT4YOR259C YDJ1P25491 409 aaKnown RBP6.55□□□□□ -1.36
RPT4YOR259C RTR1P40084 226 aaPredicted RBP6.55□□□□□ -1.36
RPT4YOR259C EMW1P42842 904 aaKnown RBP6.55□□□□□ -1.36
RPT4YOR259C MSB3P48566 633 aaPredicted RBP6.55□□□□□ -1.36
RPT4YOR259C DAL5P15365 543 aa6.54□□□□□ -1.36
RPT4YOR259C SLN1P39928 1220 aaPredicted RBP6.54□□□□□ -1.36
RPT4YOR259C SAP155P43612 1002 aa6.54□□□□□ -1.36
RPT4YOR259C YJL007CP47080 104 aa6.54□□□□□ -1.36
RPT4YOR259C RRP46P53256 223 aaPredicted RBP6.54□□□□□ -1.36
RPT4YOR259C DMA2P53924 522 aa6.54□□□□□ -1.36
RPT4YOR259C APP1P53933 587 aa6.54□□□□□ -1.36
RPT4YOR259C FRA1Q07825 749 aa6.54□□□□□ -1.36
RPT4YOR259C MCM16Q12262 181 aa6.54□□□□□ -1.36
RPT4YOR259C RPO41P13433 1351 aaKnown RBP6.54□□□□□ -1.36
RPT4YOR259C UGA3P26370 528 aa6.53□□□□□ -1.36
RPT4YOR259C YBL086CP38177 466 aa6.52□□□□□ -1.37
RPT4YOR259C YJR115WP47152 169 aa6.52□□□□□ -1.37
RPT4YOR259C PAP2P53632 584 aaKnown RBP6.52□□□□□ -1.37
RPT4YOR259C YNL108CP53929 270 aa6.52□□□□□ -1.37
RPT4YOR259C STE20Q03497 939 aaKnown RBP6.52□□□□□ -1.37
RPT4YOR259C SLM3Q12093 417 aa6.52□□□□□ -1.37
RPT4YOR259C YRF1-3P0CX14 1859 aa6.52□□□□□ -1.37
RPT4YOR259C YRF1-7P0CX15 1859 aa6.52□□□□□ -1.37
RPT4YOR259C YRF1-6P53819 1859 aa6.52□□□□□ -1.37
RPT4YOR259C SUP45P12385 437 aaKnown RBP6.51□□□□□ -1.37
RPT4YOR259C VPS24P36095 224 aaKnown RBP6.51□□□□□ -1.37
RPT4YOR259C YIL092WP40497 633 aa6.51□□□□□ -1.37
RPT4YOR259C BUD27P43573 796 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
RPT4YOR259C POL32P47110 350 aa6.51□□□□□ -1.37
RPT4YOR259C ISF1P32488 338 aa6.5□□□□□ -1.37
RPT4YOR259C BIM1P40013 344 aa6.5□□□□□ -1.37
RPT4YOR259C EMP47P43555 445 aa6.5□□□□□ -1.37
RPT4YOR259C ENT1Q12518 454 aa6.5□□□□□ -1.37
RPT4YOR259C RSF2P46974 1380 aa6.5□□□□□ -1.37
RPT4YOR259C TCB1Q12466 1186 aa6.5□□□□□ -1.37
RPT4YOR259C YRF1-4O13559 1382 aa6.49□□□□□ -1.37
RPT4YOR259C ENO2P00925 437 aaKnown RBP6.49□□□□□ -1.37
RPT4YOR259C MSP1P28737 362 aa6.49□□□□□ -1.37
RPT4YOR259C MKS1P34072 584 aa6.49□□□□□ -1.37
RPT4YOR259C ATG32P40458 529 aa6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms