Protein–RNA interactions for Protein: P13433

RPO41, DNA-directed RNA polymerase, mitochondrial, yeastyeast

Known RBP Predictions only

Length 1,351 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPO41P13433 YML009W-BYML009W-B 477 nt26.73■■□□□ 1.87
RPO41P13433 NSR1YGR159C 1245 nt26.17■■□□□ 1.78
RPO41P13433 NOP1YDL014W 984 nt25.93■■□□□ 1.74
RPO41P13433 YKL036CYKL036C 393 nt24.27■■□□□ 1.48
RPO41P13433 MDJ1YFL016C 1536 nt23.2■■□□□ 1.31
RPO41P13433 YJL027CYJL027C 417 nt22.77■■□□□ 1.24
RPO41P13433 Q0297Q0297 156 nt22.76■■□□□ 1.23
RPO41P13433 SRX1YKL086W 384 nt22.68■■□□□ 1.22
RPO41P13433 SCS3YGL126W 1143 nt22.41■■□□□ 1.18
RPO41P13433 YCR051WYCR051W 669 nt21.62■■□□□ 1.05
RPO41P13433 YOL085CYOL085C 342 nt21.02■□□□□ 0.96
RPO41P13433 PKP1YIL042C 1185 nt20.74■□□□□ 0.91
RPO41P13433 DBP2YNL112W 1641 nt20.53■□□□□ 0.88
RPO41P13433 RPP1BYDL130W 321 nt20.46■□□□□ 0.87
RPO41P13433 TRN1tP(UGG)A 72 nt20.41■□□□□ 0.86
RPO41P13433 SUF9tP(UGG)F 72 nt20.41■□□□□ 0.86
RPO41P13433 SUF8tP(UGG)H 72 nt20.41■□□□□ 0.86
RPO41P13433 tP(UGG)LtP(UGG)L 72 nt20.41■□□□□ 0.86
RPO41P13433 SUF7tP(UGG)M 72 nt20.41■□□□□ 0.86
RPO41P13433 tP(UGG)N1tP(UGG)N1 72 nt20.41■□□□□ 0.86
RPO41P13433 tP(UGG)N2tP(UGG)N2 72 nt20.41■□□□□ 0.86
RPO41P13433 tP(UGG)O1tP(UGG)O1 72 nt20.41■□□□□ 0.86
RPO41P13433 SUF11tP(UGG)O2 72 nt20.41■□□□□ 0.86
RPO41P13433 SCJ1YMR214W 1134 nt20.34■□□□□ 0.85
RPO41P13433 CCC1YLR220W 969 nt20.27■□□□□ 0.84
RPO41P13433 ATS1YAL020C 1002 nt20.15■□□□□ 0.82
RPO41P13433 PET122YER153C 765 nt19.6■□□□□ 0.73
RPO41P13433 YBR190WYBR190W 312 nt19.57■□□□□ 0.72
RPO41P13433 SCR1SCR1 522 nt19.4■□□□□ 0.7
RPO41P13433 tP(UGG)O3tP(UGG)O3 72 nt19.38■□□□□ 0.69
RPO41P13433 RVS167YDR388W 1449 nt19.36■□□□□ 0.69
RPO41P13433 RTC3YHR087W 336 nt19.26■□□□□ 0.67
RPO41P13433 RRN5YLR141W 1092 nt19■□□□□ 0.63
RPO41P13433 RSB1YOR049C 1065 nt18.76■□□□□ 0.59
RPO41P13433 SHR5YOL110W 714 nt18.74■□□□□ 0.59
RPO41P13433 YDJ1YNL064C 1230 nt18.67■□□□□ 0.58
RPO41P13433 YER088W-BYER088W-B 147 nt18.63■□□□□ 0.57
RPO41P13433 PST2YDR032C 597 nt18.56■□□□□ 0.56
RPO41P13433 GAR1YHR089C 618 nt18.34■□□□□ 0.53
RPO41P13433 DEP1YAL013W 1218 nt18.24■□□□□ 0.51
RPO41P13433 YKL097CYKL097C 411 nt18.12■□□□□ 0.49
RPO41P13433 URN1YPR152C 1398 nt18.12■□□□□ 0.49
RPO41P13433 YNL208WYNL208W 600 nt17.86■□□□□ 0.45
RPO41P13433 RPN10YHR200W 807 nt17.85■□□□□ 0.45
RPO41P13433 SHU1YHL006C 453 nt17.75■□□□□ 0.43
RPO41P13433 OPI9YLR338W 858 nt17.72■□□□□ 0.43
RPO41P13433 TIR1YER011W 765 nt17.66■□□□□ 0.42
RPO41P13433 SAH1YER043C 1350 nt17.63■□□□□ 0.41
RPO41P13433 PUT4YOR348C 1884 nt17.61■□□□□ 0.41
RPO41P13433 SSA1YAL005C 1929 nt17.42■□□□□ 0.38
RPO41P13433 ARE1YCR048W 1833 nt17.39■□□□□ 0.38
RPO41P13433 YAL037C-BYAL037C-B 975 nt17.38■□□□□ 0.37
RPO41P13433 YOR139CYOR139C 393 nt17.35■□□□□ 0.37
RPO41P13433 YHR049C-AYHR049C-A 297 nt17.27■□□□□ 0.35
RPO41P13433 YJR018WYJR018W 363 nt17.26■□□□□ 0.35
RPO41P13433 SRB2YHR041C 633 nt17.25■□□□□ 0.35
RPO41P13433 PUN1YLR414C 792 nt17.22■□□□□ 0.35
RPO41P13433 POA1YBR022W 534 nt17.14■□□□□ 0.33
RPO41P13433 YJR120WYJR120W 351 nt17.08■□□□□ 0.32
RPO41P13433 NPL3YDR432W 1245 nt17.03■□□□□ 0.32
RPO41P13433 PTC2YER089C 1395 nt17.01■□□□□ 0.31
RPO41P13433 RPP2BYDR382W 333 nt16.97■□□□□ 0.31
RPO41P13433 WWM1YFL010C 636 nt16.97■□□□□ 0.31
RPO41P13433 MNP1YGL068W 585 nt16.94■□□□□ 0.3
RPO41P13433 BUD23YCR047C 828 nt16.89■□□□□ 0.29
RPO41P13433 YGR021WYGR021W 873 nt16.89■□□□□ 0.29
RPO41P13433 HOM6YJR139C 1080 nt16.87■□□□□ 0.29
RPO41P13433 BSC6YOL137W 1494 nt16.73■□□□□ 0.27
RPO41P13433 NAB2YGL122C 1578 nt16.7■□□□□ 0.26
RPO41P13433 BDH2YAL061W 1254 nt16.66■□□□□ 0.26
RPO41P13433 YOL037CYOL037C 354 nt16.65■□□□□ 0.26
RPO41P13433 YFL021C-AYFL021C-A 855 nt16.63■□□□□ 0.25
RPO41P13433 RKM5YLR137W 1104 nt16.63■□□□□ 0.25
RPO41P13433 FPR4YLR449W 1179 nt16.63■□□□□ 0.25
RPO41P13433 tM(CAU)CtM(CAU)C 72 nt16.59■□□□□ 0.25
RPO41P13433 IMT4tM(CAU)E 72 nt16.59■□□□□ 0.25
RPO41P13433 IMT3tM(CAU)J3 72 nt16.59■□□□□ 0.25
RPO41P13433 IMT1tM(CAU)O1 72 nt16.59■□□□□ 0.25
RPO41P13433 IMT2tM(CAU)P 72 nt16.59■□□□□ 0.25
RPO41P13433 FIS1YIL065C 468 nt16.59■□□□□ 0.25
RPO41P13433 SSA3YBL075C 1950 nt16.59■□□□□ 0.25
RPO41P13433 DAL1YIR027C 1383 nt16.56■□□□□ 0.24
RPO41P13433 YBL100CYBL100C 315 nt16.53■□□□□ 0.24
RPO41P13433 INM2YDR287W 879 nt16.52■□□□□ 0.24
RPO41P13433 PHO4YFR034C 939 nt16.46■□□□□ 0.23
RPO41P13433 LSM3YLR438C-A 270 nt16.4■□□□□ 0.22
RPO41P13433 FUN26YAL022C 1554 nt16.31■□□□□ 0.2
RPO41P13433 PUS2YGL063W 1113 nt16.3■□□□□ 0.2
RPO41P13433 TRM9YML014W 840 nt16.28■□□□□ 0.2
RPO41P13433 YLR281CYLR281C 468 nt16.26■□□□□ 0.19
RPO41P13433 MOT3YMR070W 1473 nt16.18■□□□□ 0.18
RPO41P13433 WHI5YOR083W 888 nt16.15■□□□□ 0.18
RPO41P13433 CCT6YDR188W 1641 nt16.1■□□□□ 0.17
RPO41P13433 ALF1YNL148C 765 nt16.06■□□□□ 0.16
RPO41P13433 YPS1YLR120C 1710 nt15.98■□□□□ 0.15
RPO41P13433 SUF2tP(AGG)C 72 nt15.96■□□□□ 0.15
RPO41P13433 SUF10tP(AGG)N 72 nt15.96■□□□□ 0.15
RPO41P13433 YDR095CYDR095C 411 nt15.95■□□□□ 0.14
RPO41P13433 YLR154C-GYLR154C-G 150 nt15.95■□□□□ 0.14
RPO41P13433 YPR011CYPR011C 981 nt15.95■□□□□ 0.14
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms