RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W ECM16Q04217 1267 aaKnown RBP3.08□□□□□ -1.92
UBP15YMR304W NHA1Q99271 985 aa3.08□□□□□ -1.92
UBP15YMR304W FAS2P19097 1887 aaKnown RBP3.08□□□□□ -1.92
UBP15YMR304W GSC2P40989 1895 aa3.08□□□□□ -1.92
UBP15YMR304W LEO1P38439 464 aa3.07□□□□□ -1.92
UBP15YMR304W ISM1P48526 1002 aa3.07□□□□□ -1.92
UBP15YMR304W ATG20Q07528 640 aa3.07□□□□□ -1.92
UBP15YMR304W GRX1P25373 110 aaKnown RBP3.07□□□□□ -1.92
UBP15YMR304W MVP1P40959 511 aaKnown RBP3.07□□□□□ -1.92
UBP15YMR304W HIF1Q12373 385 aa3.07□□□□□ -1.92
UBP15YMR304W PRT1P06103 763 aaKnown RBP3.07□□□□□ -1.92
UBP15YMR304W MOT2P34909 587 aaKnown RBP3.07□□□□□ -1.92
UBP15YMR304W MTR4P47047 1073 aaKnown RBP3.07□□□□□ -1.92
UBP15YMR304W YJR008WP47085 338 aa3.07□□□□□ -1.92
UBP15YMR304W SAS4Q04003 481 aa3.07□□□□□ -1.92
UBP15YMR304W RPS9AO13516 197 aaKnown RBP3.06□□□□□ -1.92
UBP15YMR304W STR2P47164 639 aa3.06□□□□□ -1.92
UBP15YMR304W RAS1P01119 309 aa3.06□□□□□ -1.92
UBP15YMR304W BUD20Q08004 166 aaPredicted RBP3.06□□□□□ -1.92
UBP15YMR304W YEL077CQ3E7X8 1277 aa3.06□□□□□ -1.92
UBP15YMR304W RGR1P19263 1082 aa3.06□□□□□ -1.92
UBP15YMR304W PRP45P28004 379 aaPredicted RBP3.06□□□□□ -1.92
UBP15YMR304W POL31P46957 487 aa3.06□□□□□ -1.92
UBP15YMR304W YNL011CP53980 444 aa3.06□□□□□ -1.92
UBP15YMR304W ECM30Q06673 1274 aa3.06□□□□□ -1.92
UBP15YMR304W GAP1P19145 602 aaPredicted RBP3.05□□□□□ -1.92
UBP15YMR304W MRF1P30775 413 aaPredicted RBP3.05□□□□□ -1.92
UBP15YMR304W RME1P32338 300 aaKnown RBP3.05□□□□□ -1.92
UBP15YMR304W AUS1Q08409 1394 aa3.05□□□□□ -1.92
UBP15YMR304W TAF5P38129 798 aa3.05□□□□□ -1.92
UBP15YMR304W TIM50Q02776 476 aa3.05□□□□□ -1.92
UBP15YMR304W IKI3Q06706 1349 aaKnown RBP3.05□□□□□ -1.92
UBP15YMR304W ERG12P07277 443 aa3.05□□□□□ -1.92
UBP15YMR304W MSM1P22438 575 aa3.05□□□□□ -1.92
UBP15YMR304W ALD4P46367 519 aaKnown RBP3.05□□□□□ -1.92
UBP15YMR304W DMA2P53924 522 aa3.05□□□□□ -1.92
UBP15YMR304W FBP1P09201 348 aa3.04□□□□□ -1.92
UBP15YMR304W ERO1Q03103 563 aa3.04□□□□□ -1.92
UBP15YMR304W YRF1-4O13559 1382 aa3.04□□□□□ -1.92
UBP15YMR304W PET111P08468 800 aa3.04□□□□□ -1.92
UBP15YMR304W AMS1P22855 1083 aa3.04□□□□□ -1.92
UBP15YMR304W SQS1P53866 767 aaKnown RBP3.04□□□□□ -1.92
UBP15YMR304W SLM3Q12093 417 aa3.04□□□□□ -1.92
UBP15YMR304W PPH3P32345 308 aa3.04□□□□□ -1.92
UBP15YMR304W MNN4P36044 1178 aa3.04□□□□□ -1.92
UBP15YMR304W MPP10P47083 593 aaKnown RBP3.04□□□□□ -1.92
UBP15YMR304W YKL133CP36066 463 aa3.03□□□□□ -1.92
UBP15YMR304W CWC15Q03772 175 aaKnown RBP3.03□□□□□ -1.92
UBP15YMR304W RRP15Q06511 250 aaPredicted RBP3.03□□□□□ -1.92
UBP15YMR304W YOL087CQ99247 1116 aa3.03□□□□□ -1.92
UBP15YMR304W LYS2P07702 1392 aa3.03□□□□□ -1.92
UBP15YMR304W KEX2P13134 814 aa3.03□□□□□ -1.92
UBP15YMR304W PAT1P25644 796 aaKnown RBP3.03□□□□□ -1.92
UBP15YMR304W BRN1P38170 754 aa3.03□□□□□ -1.92
UBP15YMR304W DSF2P38213 736 aa3.03□□□□□ -1.92
UBP15YMR304W RRN7P40992 514 aa3.03□□□□□ -1.92
UBP15YMR304W EAF6P47128 113 aa3.03□□□□□ -1.92
UBP15YMR304W YRM1Q12340 786 aa3.03□□□□□ -1.92
UBP15YMR304W RAD50P12753 1312 aa3.03□□□□□ -1.92
UBP15YMR304W PSE1P32337 1089 aaKnown RBP3.03□□□□□ -1.93
UBP15YMR304W APL5Q08951 932 aaKnown RBP3.03□□□□□ -1.93
UBP15YMR304W YMR084WA2P2R3 262 aa3.02□□□□□ -1.93
UBP15YMR304W RTS3P53289 263 aa3.02□□□□□ -1.93
UBP15YMR304W MLP1Q02455 1875 aaKnown RBP3.02□□□□□ -1.93
UBP15YMR304W CPS1P27614 576 aa3.01□□□□□ -1.93
UBP15YMR304W CLB5P30283 435 aa3.01□□□□□ -1.93
UBP15YMR304W KIN4Q01919 800 aa3.01□□□□□ -1.93
UBP15YMR304W HSP82P02829 709 aaKnown RBP3.01□□□□□ -1.93
UBP15YMR304W CLC1P17891 233 aa3.01□□□□□ -1.93
UBP15YMR304W TBS1P38114 1094 aa3.01□□□□□ -1.93
UBP15YMR304W TEA1P47988 759 aa3.01□□□□□ -1.93
UBP15YMR304W VID30P53076 958 aa3.01□□□□□ -1.93
UBP15YMR304W HEL2Q05580 639 aaKnown RBP3.01□□□□□ -1.93
UBP15YMR304W RTC1Q08281 1341 aa3.01□□□□□ -1.93
UBP15YMR304W APE3P37302 537 aaKnown RBP3.01□□□□□ -1.93
UBP15YMR304W BMS1Q08965 1183 aaKnown RBP3.01□□□□□ -1.93
UBP15YMR304W TUS1Q06412 1307 aa3□□□□□ -1.93
UBP15YMR304W TY1A-DR4O74302 440 aa3□□□□□ -1.93
UBP15YMR304W TY1A-HP0C2I4 478 aaKnown RBP3□□□□□ -1.93
UBP15YMR304W TY1A-AP0CX57 440 aa3□□□□□ -1.93
UBP15YMR304W TY1A-PR1P0CX58 440 aa3□□□□□ -1.93
UBP15YMR304W TY1A-ORP0CX59 440 aa3□□□□□ -1.93
UBP15YMR304W TY1A-PR2P0CX60 440 aa3□□□□□ -1.93
UBP15YMR304W TY1A-DR5P0CX65 440 aa3□□□□□ -1.93
UBP15YMR304W TY1A-ER2P0CX66 440 aa3□□□□□ -1.93
UBP15YMR304W TY1A-GR3P0CX67 440 aa3□□□□□ -1.93
UBP15YMR304W TY1A-LR1P0CX68 440 aa3□□□□□ -1.93
UBP15YMR304W TY1A-MR2P0CX69 440 aa3□□□□□ -1.93
UBP15YMR304W TY1A-JR2P47099 440 aa3□□□□□ -1.93
UBP15YMR304W TY1A-DR1Q03856 440 aa3□□□□□ -1.93
UBP15YMR304W TY1A-ML1Q04706 440 aaKnown RBP3□□□□□ -1.93
UBP15YMR304W ARR2Q06597 130 aa3□□□□□ -1.93
UBP15YMR304W TY1A-BRQ12217 440 aa3□□□□□ -1.93
UBP15YMR304W TY1A-NL2Q12470 440 aa3□□□□□ -1.93
UBP15YMR304W TY1A-GR2Q12485 440 aa3□□□□□ -1.93
UBP15YMR304W SEC2P17065 759 aa3□□□□□ -1.93
UBP15YMR304W DIT2P21595 489 aa3□□□□□ -1.93
UBP15YMR304W FPR3P38911 411 aaKnown RBP3□□□□□ -1.93
UBP15YMR304W SNF7P39929 240 aaKnown RBP3□□□□□ -1.93
UBP15YMR304W UBX2Q04228 584 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms