RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W MSN5P52918 1224 aa10.06□□□□□ -0.8
SFP1YLR403W PDR18P53756 1333 aa10.06□□□□□ -0.8
SFP1YLR403W NUP157P40064 1391 aaKnown RBP10.06□□□□□ -0.8
SFP1YLR403W RPA135P22138 1203 aaKnown RBP10.06□□□□□ -0.8
SFP1YLR403W KEL2P50090 882 aa10.06□□□□□ -0.8
SFP1YLR403W OCA1P50946 238 aaPredicted RBP10.06□□□□□ -0.8
SFP1YLR403W ELA1P53861 379 aaPredicted RBP10.06□□□□□ -0.8
SFP1YLR403W YNL058CP53947 316 aa10.06□□□□□ -0.8
SFP1YLR403W FMP30Q02883 468 aa10.06□□□□□ -0.8
SFP1YLR403W GYL1Q04322 720 aa10.06□□□□□ -0.8
SFP1YLR403W IOC2Q12072 812 aa10.06□□□□□ -0.8
SFP1YLR403W SSK2P53599 1579 aa10.06□□□□□ -0.8
SFP1YLR403W ORM1P53224 222 aa10.05□□□□□ -0.8
SFP1YLR403W CTF4Q01454 927 aa10.05□□□□□ -0.8
SFP1YLR403W SSQ1Q05931 657 aaPredicted RBP10.05□□□□□ -0.8
SFP1YLR403W SMD2Q06217 110 aaKnown RBP10.05□□□□□ -0.8
SFP1YLR403W DNL4Q08387 944 aaPredicted RBP10.05□□□□□ -0.8
SFP1YLR403W SEC15P22224 910 aa10.05□□□□□ -0.8
SFP1YLR403W ACP1P32463 125 aa10.05□□□□□ -0.8
SFP1YLR403W PET112P33893 541 aa10.05□□□□□ -0.8
SFP1YLR403W SET2P46995 733 aaKnown RBP10.05□□□□□ -0.8
SFP1YLR403W ITT1Q04638 464 aa10.05□□□□□ -0.8
SFP1YLR403W YDL073WQ07454 984 aa10.05□□□□□ -0.8
SFP1YLR403W CLP1Q08685 445 aaPredicted RBP10.05□□□□□ -0.8
SFP1YLR403W HMI1Q12039 706 aa10.05□□□□□ -0.8
SFP1YLR403W PET494P07390 489 aaPredicted RBP10.04□□□□□ -0.8
SFP1YLR403W SKI2P35207 1287 aaKnown RBP RIP-Chip data10.04□□□□□ -0.8not detected
SFP1YLR403W OSH3P38713 996 aaKnown RBP10.04□□□□□ -0.8
SFP1YLR403W GGA2P38817 585 aaKnown RBP10.04□□□□□ -0.8
SFP1YLR403W MAD1P40957 749 aa10.04□□□□□ -0.8
SFP1YLR403W BFA1P47113 574 aa10.04□□□□□ -0.8
SFP1YLR403W NPL4P33755 580 aa10.03□□□□□ -0.8
SFP1YLR403W PES4P39684 611 aa10.03□□□□□ -0.8
SFP1YLR403W MET18P40469 1032 aa10.03□□□□□ -0.8
SFP1YLR403W PRP31P49704 494 aaPredicted RBP10.03□□□□□ -0.8
SFP1YLR403W MET4P32389 672 aa10.03□□□□□ -0.8
SFP1YLR403W TBS1P38114 1094 aa10.03□□□□□ -0.8
SFP1YLR403W RFC5P38251 354 aa10.03□□□□□ -0.8
SFP1YLR403W FAF1P40546 346 aaPredicted RBP10.03□□□□□ -0.8
SFP1YLR403W PMT7Q06644 662 aa10.03□□□□□ -0.8
SFP1YLR403W IQG1Q12280 1495 aa10.03□□□□□ -0.8
SFP1YLR403W ROM2P51862 1356 aaKnown RBP10.02□□□□□ -0.81
SFP1YLR403W TPD3P31383 635 aa10.02□□□□□ -0.81
SFP1YLR403W HSP104P31539 908 aaKnown RBP10.02□□□□□ -0.81
SFP1YLR403W SPC72P39723 622 aa10.02□□□□□ -0.81
SFP1YLR403W YGL082WP53155 381 aa10.02□□□□□ -0.81
SFP1YLR403W YIG1Q08956 461 aa10.02□□□□□ -0.81
SFP1YLR403W DLD1P32891 587 aa10.02□□□□□ -0.81
SFP1YLR403W MFT1P33441 392 aaKnown RBP10.02□□□□□ -0.81
SFP1YLR403W NOC3Q07896 663 aaPredicted RBP10.02□□□□□ -0.81
SFP1YLR403W CHS5Q12114 671 aaKnown RBP10.02□□□□□ -0.81
SFP1YLR403W PAN1P32521 1480 aa10.01□□□□□ -0.81
SFP1YLR403W NUP159P40477 1460 aa10.01□□□□□ -0.81
SFP1YLR403W MRC1P25588 1096 aa10□□□□□ -0.81
SFP1YLR403W SLD2P34252 453 aa10□□□□□ -0.81
SFP1YLR403W FAP1P53971 965 aa10□□□□□ -0.81
SFP1YLR403W PUF4P25339 888 aaKnown RBP RIP-Chip data10□□□□□ -0.81not detected
SFP1YLR403W CPS1P27614 576 aa10□□□□□ -0.81
SFP1YLR403W ALD4P46367 519 aaKnown RBP10□□□□□ -0.81
SFP1YLR403W PDR5P33302 1511 aaKnown RBP10□□□□□ -0.81
SFP1YLR403W OPI1P21957 404 aa9.99□□□□□ -0.81
SFP1YLR403W CDC10P25342 322 aaKnown RBP9.99□□□□□ -0.81
SFP1YLR403W PAP1P29468 568 aaKnown RBP9.99□□□□□ -0.81
SFP1YLR403W GNT1Q12096 491 aa9.99□□□□□ -0.81
SFP1YLR403W SMY2P32909 740 aaKnown RBP9.98□□□□□ -0.81
SFP1YLR403W MNR2P35724 969 aa9.98□□□□□ -0.81
SFP1YLR403W HEL1P36113 551 aa9.98□□□□□ -0.81
SFP1YLR403W UBP3Q01477 912 aaKnown RBP RIP-Chip data9.98□□□□□ -0.81 RIP-Chip
SFP1YLR403W FUS2Q05670 677 aa9.98□□□□□ -0.81
SFP1YLR403W CMS1Q07897 291 aaKnown RBP9.98□□□□□ -0.81
SFP1YLR403W MPH3P0CE00 602 aa9.98□□□□□ -0.81
SFP1YLR403W SPC42P36094 363 aa9.98□□□□□ -0.81
SFP1YLR403W MVP1P40959 511 aaKnown RBP9.98□□□□□ -0.81
SFP1YLR403W RAD17P48581 401 aa9.98□□□□□ -0.81
SFP1YLR403W NOP15P53927 220 aaPredicted RBP9.98□□□□□ -0.81
SFP1YLR403W MET5P47169 1442 aa9.98□□□□□ -0.81
SFP1YLR403W SWI1P09547 1314 aa9.97□□□□□ -0.81
SFP1YLR403W PHO84P25297 587 aaKnown RBP9.97□□□□□ -0.81
SFP1YLR403W TIM50Q02776 476 aa9.97□□□□□ -0.81
SFP1YLR403W PLP1Q04004 230 aa9.97□□□□□ -0.81
SFP1YLR403W LCB5Q06147 687 aaKnown RBP9.97□□□□□ -0.81
SFP1YLR403W SWC3P31376 625 aa9.97□□□□□ -0.81
SFP1YLR403W RPN12P32496 274 aa9.97□□□□□ -0.81
SFP1YLR403W NIP100P33420 868 aa9.97□□□□□ -0.81
SFP1YLR403W APD1P38281 316 aa9.97□□□□□ -0.81
SFP1YLR403W RTC4P53850 401 aa9.97□□□□□ -0.81
SFP1YLR403W PNG1Q02890 363 aa9.97□□□□□ -0.81
SFP1YLR403W TSR1Q07381 788 aaKnown RBP9.97□□□□□ -0.81
SFP1YLR403W VAM6Q07468 1049 aa9.97□□□□□ -0.81
SFP1YLR403W STU1P38198 1513 aa9.96□□□□□ -0.81
SFP1YLR403W PPH3P32345 308 aa9.96□□□□□ -0.81
SFP1YLR403W NUP120P35729 1037 aa9.96□□□□□ -0.81
SFP1YLR403W ESL2P36168 1195 aa9.96□□□□□ -0.81
SFP1YLR403W MUM2P38236 366 aa9.96□□□□□ -0.81
SFP1YLR403W ARB1P40024 610 aaKnown RBP9.96□□□□□ -0.81
SFP1YLR403W MEP1P40260 492 aa9.96□□□□□ -0.81
SFP1YLR403W VID28P40547 921 aa9.96□□□□□ -0.81
SFP1YLR403W SDA1P53313 767 aaKnown RBP9.96□□□□□ -0.81
SFP1YLR403W ASI1P54074 624 aa9.96□□□□□ -0.81
SFP1YLR403W BUD7Q08754 746 aa9.96□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms