RNA–Protein interactions for RNA: YLR018C

POM34, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene POM34, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
POM34YLR018C YKU70P32807 602 aa11.78□□□□□ -0.52
POM34YLR018C FPR4Q06205 392 aaPredicted RBP11.78□□□□□ -0.52
POM34YLR018C HXT13P39924 564 aa11.77□□□□□ -0.53
POM34YLR018C YIR042CP40586 236 aa11.77□□□□□ -0.53
POM34YLR018C HXT17P53631 564 aa11.77□□□□□ -0.53
POM34YLR018C INM2Q05533 292 aa11.77□□□□□ -0.53
POM34YLR018C TOP1P04786 769 aa11.76□□□□□ -0.53
POM34YLR018C RPT3P33298 428 aaKnown RBP11.76□□□□□ -0.53
POM34YLR018C STM1P39015 273 aaKnown RBP11.76□□□□□ -0.53
POM34YLR018C SET4P42948 560 aa11.76□□□□□ -0.53
POM34YLR018C UBX2Q04228 584 aa11.76□□□□□ -0.53
POM34YLR018C TOS4Q06266 489 aa11.75□□□□□ -0.53
POM34YLR018C AAP1P37898 856 aaKnown RBP11.74□□□□□ -0.53
POM34YLR018C YMR147WP40218 223 aaKnown RBP11.74□□□□□ -0.53
POM34YLR018C GSM1P42950 618 aa11.74□□□□□ -0.53
POM34YLR018C JJJ2P46997 583 aa11.73□□□□□ -0.53
POM34YLR018C GAS5Q08193 484 aa11.73□□□□□ -0.53
POM34YLR018C YIR014WP40570 242 aa11.72□□□□□ -0.53
POM34YLR018C PTK1P36002 662 aaPredicted RBP11.71□□□□□ -0.53
POM34YLR018C GRX7P38068 203 aa11.71□□□□□ -0.53
POM34YLR018C OSH3P38713 996 aaKnown RBP11.71□□□□□ -0.53
POM34YLR018C TIF4632P39936 914 aaKnown RBP11.71□□□□□ -0.53
POM34YLR018C YFH7P43591 353 aa11.71□□□□□ -0.53
POM34YLR018C DPL1Q05567 589 aa11.71□□□□□ -0.53
POM34YLR018C OPI1P21957 404 aa11.69□□□□□ -0.54
POM34YLR018C SHC1P39000 512 aa11.69□□□□□ -0.54
POM34YLR018C PRP42Q03776 544 aaKnown RBP11.69□□□□□ -0.54
POM34YLR018C WRS1Q12109 432 aaKnown RBP11.69□□□□□ -0.54
POM34YLR018C PSF3Q12146 194 aa11.69□□□□□ -0.54
POM34YLR018C DIP2Q12220 943 aaPredicted RBP11.69□□□□□ -0.54
POM34YLR018C BBC1P47068 1157 aa11.68□□□□□ -0.54
POM34YLR018C SQS1P53866 767 aaKnown RBP11.68□□□□□ -0.54
POM34YLR018C PKH3Q03306 898 aaPredicted RBP11.68□□□□□ -0.54
POM34YLR018C RRG1Q12167 365 aaPredicted RBP11.68□□□□□ -0.54
POM34YLR018C RLF2Q12495 606 aa11.68□□□□□ -0.54
POM34YLR018C CYB2P00175 591 aa11.67□□□□□ -0.54
POM34YLR018C MDL2P33311 773 aa11.67□□□□□ -0.54
POM34YLR018C ENP2P48234 707 aaKnown RBP11.67□□□□□ -0.54
POM34YLR018C DUR1,2P32528 1835 aaKnown RBP11.67□□□□□ -0.54
POM34YLR018C LAM4P38800 1345 aa11.66□□□□□ -0.54
POM34YLR018C FAS2P19097 1887 aaKnown RBP11.66□□□□□ -0.54
POM34YLR018C ARG82P07250 355 aa11.66□□□□□ -0.54
POM34YLR018C AFG2P32794 780 aa11.66□□□□□ -0.54
POM34YLR018C BOI1P38041 980 aaKnown RBP11.66□□□□□ -0.54
POM34YLR018C KRI1P42846 591 aaKnown RBP11.66□□□□□ -0.54
POM34YLR018C IRC8P47046 822 aa11.66□□□□□ -0.54
POM34YLR018C KAR5Q04746 504 aa11.66□□□□□ -0.54
POM34YLR018C TAH18Q12181 623 aa11.66□□□□□ -0.54
POM34YLR018C FIG2P25653 1609 aa11.64□□□□□ -0.55
POM34YLR018C TRL1P09880 827 aaKnown RBP11.64□□□□□ -0.55
POM34YLR018C IOC3P43596 787 aa11.64□□□□□ -0.55
POM34YLR018C ATG20Q07528 640 aa11.64□□□□□ -0.55
POM34YLR018C PGA3Q12746 312 aaKnown RBP11.64□□□□□ -0.55
POM34YLR018C RPS9BP05755 195 aaKnown RBP11.63□□□□□ -0.55
POM34YLR018C SSA1P10591 642 aaKnown RBP11.63□□□□□ -0.55
POM34YLR018C MSM1P22438 575 aa11.63□□□□□ -0.55
POM34YLR018C RPS7AP26786 190 aaKnown RBP11.63□□□□□ -0.55
POM34YLR018C NPL4P33755 580 aa11.63□□□□□ -0.55
POM34YLR018C MET1P36150 593 aa11.63□□□□□ -0.55
POM34YLR018C OPY1P38271 328 aa11.63□□□□□ -0.55
POM34YLR018C SNF3P10870 884 aa11.62□□□□□ -0.55
POM34YLR018C TPM1P17536 199 aaKnown RBP11.62□□□□□ -0.55
POM34YLR018C GEF1P37020 779 aa11.62□□□□□ -0.55
POM34YLR018C CIC1P38779 376 aaKnown RBP11.62□□□□□ -0.55
POM34YLR018C PUS6P53294 404 aa11.62□□□□□ -0.55
POM34YLR018C PPM2Q08282 695 aa11.62□□□□□ -0.55
POM34YLR018C COQ1P18900 473 aa11.61□□□□□ -0.55
POM34YLR018C RRP8P38961 392 aaKnown RBP11.61□□□□□ -0.55
POM34YLR018C APL6P46682 809 aa11.61□□□□□ -0.55
POM34YLR018C PIP2P52960 996 aa11.61□□□□□ -0.55
POM34YLR018C FLO11P08640 1367 aa11.6□□□□□ -0.55
POM34YLR018C RNR2P09938 399 aaKnown RBP11.6□□□□□ -0.55
POM34YLR018C PCT1P13259 424 aa11.6□□□□□ -0.55
POM34YLR018C IMP2'P32351 346 aa11.6□□□□□ -0.55
POM34YLR018C SLI15P38283 698 aa11.6□□□□□ -0.55
POM34YLR018C FPK1P53739 893 aa11.6□□□□□ -0.55
POM34YLR018C NSG2P53898 299 aa11.6□□□□□ -0.55
POM34YLR018C HKR1P41809 1802 aa11.6□□□□□ -0.55
POM34YLR018C GAP1P19145 602 aaPredicted RBP11.59□□□□□ -0.55
POM34YLR018C SLN1P39928 1220 aaPredicted RBP11.59□□□□□ -0.55
POM34YLR018C AIM9P40053 627 aaKnown RBP11.59□□□□□ -0.55
POM34YLR018C TRM44Q02648 567 aaKnown RBP11.59□□□□□ -0.55
POM34YLR018C SEN54Q02825 467 aaPredicted RBP11.59□□□□□ -0.55
POM34YLR018C ACK1Q07622 623 aaPredicted RBP11.59□□□□□ -0.55
POM34YLR018C SSF2Q12153 453 aaPredicted RBP11.59□□□□□ -0.55
POM34YLR018C CHO2P05374 869 aaKnown RBP11.58□□□□□ -0.56
POM34YLR018C CRF1Q04930 467 aa11.58□□□□□ -0.56
POM34YLR018C SRS2P12954 1174 aa11.57□□□□□ -0.56
POM34YLR018C SKI2P35207 1287 aaKnown RBP RIP-Chip data11.57□□□□□ -0.56not detected
POM34YLR018C VPS4P52917 437 aa11.57□□□□□ -0.56
POM34YLR018C ESF1Q06344 628 aaKnown RBP11.57□□□□□ -0.56
POM34YLR018C STV1P37296 890 aa11.56□□□□□ -0.56
POM34YLR018C SPO22P40511 975 aa11.56□□□□□ -0.56
POM34YLR018C RPS15Q01855 142 aaKnown RBP11.56□□□□□ -0.56
POM34YLR018C PEP3P27801 918 aa11.55□□□□□ -0.56
POM34YLR018C CRG1P38892 291 aaRIP-Chip data11.55□□□□□ -0.56not detected
POM34YLR018C VID28P40547 921 aa11.55□□□□□ -0.56
POM34YLR018C ARP5P53946 755 aa11.55□□□□□ -0.56
POM34YLR018C UFD2P54860 961 aa11.55□□□□□ -0.56
POM34YLR018C MRD1Q06106 887 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms